Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2966

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
3,081,159	+		Ga0059261_2965	0.17	-0.5
3,081,159	+		Ga0059261_2965	0.17	+0.7
3,081,160	-		Ga0059261_2965	0.17	+0.2
3,081,219	+		Ga0059261_2965	0.23	+0.7
3,081,220	-		Ga0059261_2965	0.23	+0.1
3,081,495	+		Ga0059261_2965	0.50	-0.1
3,081,495	+		Ga0059261_2965	0.50	+0.2
3,081,496	-		Ga0059261_2965	0.50	+0.2
3,081,687	+		Ga0059261_2965	0.69	+0.6
3,081,687	+		Ga0059261_2965	0.69	-0.2
3,081,687	+		Ga0059261_2965	0.69	-0.1
3,081,687	+		Ga0059261_2965	0.69	+0.2
3,081,688	-		Ga0059261_2965	0.69	-0.1
3,081,688	-		Ga0059261_2965	0.69	-0.7
3,081,688	-		Ga0059261_2965	0.69	+0.6
3,081,688	-		Ga0059261_2965	0.69	+0.6
3,081,688	-		Ga0059261_2965	0.69	-0.1
3,081,732	+		Ga0059261_2965	0.73	+0.4
3,081,732	+		Ga0059261_2965	0.73	+1.1
3,081,732	+		Ga0059261_2965	0.73	-0.4
3,081,732	+		Ga0059261_2965	0.73	-0.8
3,081,732	+		Ga0059261_2965	0.73	-0.1
3,081,732	+				+0.7
3,081,733	-		Ga0059261_2965	0.73	-0.5
3,081,756	+		Ga0059261_2965	0.76	-0.0
3,081,756	+		Ga0059261_2965	0.76	-0.3
3,081,989	-				-0.7
3,082,075	+				+0.7
3,082,075	+				+0.2
3,082,075	+				+1.0
3,082,075	+				-0.0
3,082,075	+				-0.1
3,082,075	+				+0.2
3,082,075	+				+0.0
3,082,075	+				-1.4
3,082,075	+				-0.8
3,082,076	-				-0.9
3,082,076	-				-0.1
3,082,076	-				-0.0
3,082,076	-				-0.7
3,082,076	-				-0.1
3,082,076	-				+0.7
3,082,217	+				+0.0
3,082,218	-		Ga0059261_2966	0.25	+0.1
3,082,218	-		Ga0059261_2966	0.25	+0.2
3,082,219	+		Ga0059261_2966	0.26	-0.7
3,082,220	-		Ga0059261_2966	0.26	-0.5
3,082,220	-		Ga0059261_2966	0.26	+1.3
3,082,220	-		Ga0059261_2966	0.26	+0.3
3,082,220	-		Ga0059261_2966	0.26	-0.4
3,082,315	+		Ga0059261_2966	0.38	+0.2
3,082,316	-		Ga0059261_2966	0.38	-0.7
3,082,316	-		Ga0059261_2966	0.38	+0.8
3,082,316	-		Ga0059261_2966	0.38	+1.8
3,082,316	-		Ga0059261_2966	0.38	+0.7
3,082,316	-		Ga0059261_2966	0.38	+0.2
3,082,804	-				-0.2
3,082,804	-				-0.2
3,082,840	+				-0.3
3,082,840	+				+0.1
3,082,840	+				-0.3
3,082,841	-				-0.3
3,082,841	-				-0.2
3,082,841	-				+0.1
3,082,841	-				-2.1
3,082,842	+				+1.1
3,082,842	+				-0.0
3,082,842	+				-0.0
3,082,842	+				+0.6
3,082,842	+				-0.1
3,082,843	-				+0.3
3,082,843	-				-1.1
3,082,843	-				+0.1
3,082,843	-				-0.1
3,082,843	-				-0.3
3,082,843	-				+0.2
3,082,843	-				-0.3
3,082,881	+				+1.1
3,082,881	+				-0.3
3,082,881	+				+0.5
3,082,881	+				-1.0
3,082,881	+				-0.3
3,082,881	+				+0.1
3,082,881	+				+1.5
3,082,881	+				-0.4
3,082,881	+				-0.2
3,082,881	+				-0.5
3,082,881	+				+0.0
3,082,881	+				-0.0
3,082,882	-				+0.8
3,082,882	-				+0.8
3,082,882	-				-0.3
3,082,882	-				+0.8
3,082,903	+		Ga0059261_2967	0.12	+0.8
3,082,903	+		Ga0059261_2967	0.12	+0.3
3,082,904	-		Ga0059261_2967	0.12	+0.1
3,082,904	-		Ga0059261_2967	0.12	+0.4
3,083,025	+		Ga0059261_2967	0.26	-0.3
3,083,026	-		Ga0059261_2967	0.27	+0.5
3,083,026	-		Ga0059261_2967	0.27	+0.6
3,083,031	+		Ga0059261_2967	0.27	-0.1
3,083,031	+		Ga0059261_2967	0.27	+0.4
3,083,031	+		Ga0059261_2967	0.27	+0.7
3,083,031	+		Ga0059261_2967	0.27	-0.1
3,083,031	+		Ga0059261_2967	0.27	-0.3
3,083,031	+		Ga0059261_2967	0.27	-0.7
3,083,031	+		Ga0059261_2967	0.27	-0.1
3,083,031	+		Ga0059261_2967	0.27	-0.2
3,083,031	+		Ga0059261_2967	0.27	-0.8
3,083,031	+		Ga0059261_2967	0.27	-0.3
3,083,031	+		Ga0059261_2967	0.27	+0.0
3,083,032	-		Ga0059261_2967	0.27	-0.3
3,083,032	-		Ga0059261_2967	0.27	+0.7
3,083,032	-		Ga0059261_2967	0.27	-1.2
3,083,032	-		Ga0059261_2967	0.27	-0.8
3,083,032	-		Ga0059261_2967	0.27	+0.5
3,083,032	-		Ga0059261_2967	0.27	+0.7
3,083,032	-		Ga0059261_2967	0.27	-0.8
3,083,032	-		Ga0059261_2967	0.27	-0.7
3,083,032	-		Ga0059261_2967	0.27	+0.4
3,083,032	-		Ga0059261_2967	0.27	-1.0
3,083,032	-		Ga0059261_2967	0.27	-0.4
3,083,032	-		Ga0059261_2967	0.27	-0.1
3,083,032	-		Ga0059261_2967	0.27	-0.5
3,083,032	-		Ga0059261_2967	0.27	-1.3
3,083,032	-		Ga0059261_2967	0.27	-0.0
3,083,032	-		Ga0059261_2967	0.27	+0.7
3,083,154	+		Ga0059261_2967	0.42	+0.1
3,083,154	+		Ga0059261_2967	0.42	-1.3
3,083,154	+		Ga0059261_2967	0.42	+0.9
3,083,154	+		Ga0059261_2967	0.42	-0.6
3,083,154	+		Ga0059261_2967	0.42	-0.0
3,083,154	+		Ga0059261_2967	0.42	+0.3
3,083,154	+		Ga0059261_2967	0.42	-0.1
3,083,155	-		Ga0059261_2967	0.42	-0.4
3,083,155	-		Ga0059261_2967	0.42	+0.2
3,083,155	-		Ga0059261_2967	0.42	-1.0
3,083,155	-		Ga0059261_2967	0.42	+2.3
3,083,155	-		Ga0059261_2967	0.42	+1.7
3,083,155	-		Ga0059261_2967	0.42	-0.0
3,083,265	+		Ga0059261_2967	0.55	+0.2
3,083,265	+		Ga0059261_2967	0.55	-0.4
3,083,265	+		Ga0059261_2967	0.55	+0.4
3,083,266	-		Ga0059261_2967	0.55	+1.9
3,083,266	-		Ga0059261_2967	0.55	+0.2
3,083,266	-		Ga0059261_2967	0.55	-0.7
3,083,319	+		Ga0059261_2967	0.61	+0.2
3,083,319	+		Ga0059261_2967	0.61	+0.6
3,083,319	+		Ga0059261_2967	0.61	+0.2
3,083,319	+		Ga0059261_2967	0.61	+0.5
3,083,319	+		Ga0059261_2967	0.61	+0.2
3,083,320	-		Ga0059261_2967	0.61	+0.7
3,083,320	-		Ga0059261_2967	0.61	-0.2
3,083,320	-		Ga0059261_2967	0.61	+0.7
3,083,320	-		Ga0059261_2967	0.61	-0.2
3,083,320	-		Ga0059261_2967	0.61	+0.1
3,083,320	-		Ga0059261_2967	0.61	+0.3
3,083,523	+		Ga0059261_2967	0.86	-0.3
3,083,523	+		Ga0059261_2967	0.86	-0.3
3,083,523	+		Ga0059261_2967	0.86	+0.2
3,083,523	+		Ga0059261_2967	0.86	-0.1
3,083,523	+		Ga0059261_2967	0.86	-0.8
3,083,523	+		Ga0059261_2967	0.86	+1.3
3,083,523	+		Ga0059261_2967	0.86	+1.0
3,083,524	-		Ga0059261_2967	0.86	+0.4
3,083,524	-		Ga0059261_2967	0.86	+0.8
3,083,524	-		Ga0059261_2967	0.86	-0.4
3,083,524	-		Ga0059261_2967	0.86	-0.6
3,083,524	-		Ga0059261_2967	0.86	+0.7
3,083,568	+				-0.5
3,083,568	+				-0.1
3,083,568	+				-0.7
3,083,569	-				-0.5
3,083,625	+				-0.2
3,083,625	+				-0.1
3,083,625	+				+0.2
3,083,625	+				-0.2
3,083,626	-				-0.4
3,083,626	-				-0.3
3,083,626	-				+0.0
3,083,628	+				-0.2
3,083,628	+				-0.4
3,083,628	+				-0.6
3,083,629	-				+0.9
3,083,629	-				+1.3
3,083,629	-				-0.5
3,083,718	+				-1.4
3,083,719	-				-0.3
3,083,719	-				+1.0
3,083,719	-				-0.0
3,083,751	+		Ga0059261_2968	0.11	+0.1
3,083,751	+		Ga0059261_2968	0.11	+0.1
3,083,757	+		Ga0059261_2968	0.12	+0.3
3,083,757	+		Ga0059261_2968	0.12	+0.2
3,083,757	+		Ga0059261_2968	0.12	+0.2
3,083,758	-		Ga0059261_2968	0.12	-0.4
3,083,758	-		Ga0059261_2968	0.12	+0.7
3,083,758	-		Ga0059261_2968	0.12	-0.3
3,083,758	-		Ga0059261_2968	0.12	-0.2