Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2452

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
2,535,906	+				+0.6
2,535,906	+				+0.4
2,535,906	+				+0.2
2,535,906	+				+1.3
2,535,906	+				+0.5
2,535,906	+				+0.4
2,535,907	-				+1.0
2,535,907	-				-0.4
2,536,133	+				+1.3
2,536,133	+				-0.3
2,536,133	+				-0.3
2,536,133	+				-0.3
2,536,134	-				+0.4
2,536,134	-				+0.3
2,536,134	-				+0.5
2,536,134	-				-0.1
2,536,217	+		Ga0059261_2451	0.23	+0.4
2,536,217	+		Ga0059261_2451	0.23	+0.5
2,536,217	+		Ga0059261_2451	0.23	-0.2
2,536,217	+		Ga0059261_2451	0.23	-0.7
2,536,217	+		Ga0059261_2451	0.23	-1.7
2,536,217	+		Ga0059261_2451	0.23	+0.5
2,536,218	-		Ga0059261_2451	0.24	+1.1
2,536,218	-		Ga0059261_2451	0.24	+0.1
2,536,218	-		Ga0059261_2451	0.24	+2.1
2,536,226	+				-0.1
2,536,226	+		Ga0059261_2451	0.25	+0.5
2,536,227	-		Ga0059261_2451	0.26	+0.3
2,536,227	-		Ga0059261_2451	0.26	+0.8
2,536,227	-		Ga0059261_2451	0.26	+0.0
2,536,375	+		Ga0059261_2451	0.58	+0.5
2,536,375	+		Ga0059261_2451	0.58	-1.7
2,536,375	+		Ga0059261_2451	0.58	+0.7
2,536,375	+		Ga0059261_2451	0.58	+1.3
2,536,375	+		Ga0059261_2451	0.58	-1.0
2,536,375	+		Ga0059261_2451	0.58	-0.5
2,536,375	+		Ga0059261_2451	0.58	-0.8
2,536,375	+		Ga0059261_2451	0.58	+0.4
2,536,375	+		Ga0059261_2451	0.58	+0.5
2,536,375	+				+1.5
2,536,376	-		Ga0059261_2451	0.59	+0.3
2,536,376	-		Ga0059261_2451	0.59	-0.6
2,536,376	-		Ga0059261_2451	0.59	-0.6
2,536,531	+				-0.5
2,536,532	-				-1.7
2,536,546	+				-0.5
2,536,546	+				-0.4
2,536,547	-				-0.2
2,536,547	-				-0.7
2,536,547	-				+0.1
2,536,547	-				-0.8
2,536,547	-				-0.8
2,536,665	+		Ga0059261_2452	0.35	-1.2
2,536,665	+		Ga0059261_2452	0.35	+0.7
2,536,665	+		Ga0059261_2452	0.35	-0.5
2,536,665	+		Ga0059261_2452	0.35	+0.5
2,536,666	-		Ga0059261_2452	0.35	+0.5
2,536,666	-		Ga0059261_2452	0.35	+0.3
2,536,666	-		Ga0059261_2452	0.35	-0.3
2,536,666	-		Ga0059261_2452	0.35	-1.0
2,536,666	-		Ga0059261_2452	0.35	+0.4
2,536,666	-		Ga0059261_2452	0.35	+0.6
2,536,666	-		Ga0059261_2452	0.35	-0.3
2,536,666	-		Ga0059261_2452	0.35	-0.2
2,536,666	-		Ga0059261_2452	0.35	-0.3
2,536,699	+		Ga0059261_2452	0.46	+0.7
2,536,700	-		Ga0059261_2452	0.46	+0.5
2,536,711	+		Ga0059261_2452	0.50	+0.8
2,536,711	+		Ga0059261_2452	0.50	-0.2
2,536,711	+		Ga0059261_2452	0.50	+0.4
2,536,711	+		Ga0059261_2452	0.50	-0.7
2,536,712	-		Ga0059261_2452	0.51	+0.6
2,536,712	-		Ga0059261_2452	0.51	+1.1
2,536,712	-		Ga0059261_2452	0.51	-0.1
2,536,712	-		Ga0059261_2452	0.51	-0.5
2,536,712	-		Ga0059261_2452	0.51	-0.2
2,536,712	-		Ga0059261_2452	0.51	+0.5
2,536,712	-		Ga0059261_2452	0.51	+0.3
2,536,712	-		Ga0059261_2452	0.51	-0.3
2,536,758	+		Ga0059261_2452	0.66	+0.0
2,536,758	+		Ga0059261_2452	0.66	-1.1
2,536,758	+		Ga0059261_2452	0.66	+0.5
2,536,758	+		Ga0059261_2452	0.66	-0.1
2,536,759	-		Ga0059261_2452	0.66	-0.0
2,536,759	-		Ga0059261_2452	0.66	+0.1
2,536,759	-		Ga0059261_2452	0.66	-0.3
2,536,759	-		Ga0059261_2452	0.66	+0.3
2,536,776	+		Ga0059261_2452	0.72	-0.3
2,536,776	+		Ga0059261_2452	0.72	+0.4
2,536,776	+				+0.5
2,536,776	+		Ga0059261_2452	0.72	-0.1
2,536,776	+		Ga0059261_2452	0.72	+0.9
2,536,776	+		Ga0059261_2452	0.72	+0.8
2,536,777	-		Ga0059261_2452	0.72	+0.8
2,536,777	-		Ga0059261_2452	0.72	+0.3
2,536,777	-		Ga0059261_2452	0.72	+0.1
2,536,843	+				+1.8
2,536,843	+				+2.3
2,536,843	+				+0.0
2,536,843	+				+0.1
2,536,843	+				-0.2
2,536,843	+				-1.0
2,536,843	+				+0.6
2,536,844	-				-0.2
2,536,844	-				-0.3
2,536,844	-				-0.8
2,536,882	+				+0.1
2,536,882	+				+0.8
2,536,882	+				-0.5
2,536,882	+				+0.4
2,536,883	-				+0.0
2,536,883	-				+0.2
2,536,883	-				-0.2
2,536,883	-				-1.5
2,536,883	-				+0.4
2,536,938	+				-0.0
2,536,939	-				+0.7
2,537,794	+				-1.1
2,537,817	+				-1.2
2,537,817	+				-0.8
2,537,818	-				-1.0
2,537,818	-				+1.5
2,537,818	-				-0.6
2,537,818	-				+1.2
2,537,818	-				-1.7
2,537,853	-				+1.5