Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1587

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
1,663,401	+		Ga0059261_1586	0.48	-0.0
1,663,401	+		Ga0059261_1586	0.48	-1.4
1,663,401	+		Ga0059261_1586	0.48	-0.7
1,663,450	+		Ga0059261_1586	0.51	-0.0
1,663,450	+		Ga0059261_1586	0.51	+0.4
1,663,451	-		Ga0059261_1586	0.51	+0.5
1,663,497	+		Ga0059261_1586	0.54	+0.6
1,663,497	+		Ga0059261_1586	0.54	+0.6
1,663,497	+		Ga0059261_1586	0.54	-0.3
1,663,498	-		Ga0059261_1586	0.55	+1.0
1,663,612	+		Ga0059261_1586	0.63	+0.2
1,663,672	+		Ga0059261_1586	0.67	+1.1
1,663,672	+		Ga0059261_1586	0.67	+0.4
1,663,672	+		Ga0059261_1586	0.67	+0.3
1,663,672	+		Ga0059261_1586	0.67	+0.7
1,663,673	-		Ga0059261_1586	0.67	+1.1
1,663,673	-		Ga0059261_1586	0.67	-0.3
1,663,717	+		Ga0059261_1586	0.70	+0.3
1,663,717	+		Ga0059261_1586	0.70	+0.3
1,663,718	-		Ga0059261_1586	0.70	+0.2
1,663,718	-		Ga0059261_1586	0.70	-0.1
1,663,718	-		Ga0059261_1586	0.70	-0.2
1,663,824	+		Ga0059261_1586	0.77	+0.2
1,663,824	+		Ga0059261_1586	0.77	+0.1
1,663,824	+		Ga0059261_1586	0.77	+0.1
1,663,824	+		Ga0059261_1586	0.77	+1.7
1,663,824	+		Ga0059261_1586	0.77	+0.9
1,663,824	+		Ga0059261_1586	0.77	+0.6
1,663,824	+		Ga0059261_1586	0.77	+0.5
1,663,824	+		Ga0059261_1586	0.77	+0.2
1,663,824	+		Ga0059261_1586	0.77	+1.2
1,663,824	+		Ga0059261_1586	0.77	-1.1
1,663,825	-		Ga0059261_1586	0.77	-1.3
1,663,825	-		Ga0059261_1586	0.77	+1.9
1,663,825	-		Ga0059261_1586	0.77	-0.2
1,663,825	-		Ga0059261_1586	0.77	+0.3
1,663,825	-		Ga0059261_1586	0.77	-0.8
1,663,825	-		Ga0059261_1586	0.77	-0.1
1,663,825	-		Ga0059261_1586	0.77	-0.5
1,663,829	+		Ga0059261_1586	0.78	+0.5
1,663,829	+		Ga0059261_1586	0.78	+1.8
1,663,829	+		Ga0059261_1586	0.78	+0.1
1,663,829	+				+0.2
1,663,829	+		Ga0059261_1586	0.78	+0.7
1,663,830	-		Ga0059261_1586	0.78	+1.2
1,663,830	-		Ga0059261_1586	0.78	+0.1
1,663,830	-		Ga0059261_1586	0.78	+0.9
1,663,830	-		Ga0059261_1586	0.78	+0.2
1,663,830	-		Ga0059261_1586	0.78	+0.7
1,663,830	-		Ga0059261_1586	0.78	-0.8
1,663,836	-		Ga0059261_1586	0.78	+0.7
1,663,836	-		Ga0059261_1586	0.78	+0.8
1,663,870	+		Ga0059261_1586	0.81	+0.5
1,663,881	+		Ga0059261_1586	0.81	+0.1
1,663,881	+		Ga0059261_1586	0.81	+0.1
1,663,882	-		Ga0059261_1586	0.81	+0.4
1,663,882	-		Ga0059261_1586	0.81	-0.3
1,663,971	+		Ga0059261_1586	0.88	+0.1
1,663,971	+		Ga0059261_1586	0.88	+0.4
1,663,971	+		Ga0059261_1586	0.88	-0.4
1,663,971	+		Ga0059261_1586	0.88	+0.6
1,663,971	+		Ga0059261_1586	0.88	-0.8
1,663,971	+		Ga0059261_1586	0.88	-0.1
1,663,971	+		Ga0059261_1586	0.88	+0.0
1,663,971	+		Ga0059261_1586	0.88	-0.2
1,663,971	+		Ga0059261_1586	0.88	+0.4
1,663,971	+		Ga0059261_1586	0.88	+0.7
1,663,971	+		Ga0059261_1586	0.88	-0.4
1,663,972	-		Ga0059261_1586	0.88	+0.1
1,663,972	-		Ga0059261_1586	0.88	+0.2
1,663,972	-		Ga0059261_1586	0.88	+0.0
1,663,972	-		Ga0059261_1586	0.88	+0.5
1,663,972	-		Ga0059261_1586	0.88	-0.3
1,663,972	-		Ga0059261_1586	0.88	+0.9
1,664,035	+				+0.4
1,664,035	+				+0.5
1,664,036	-				+0.4
1,664,047	+				-0.1
1,664,047	+				+0.4
1,664,047	+				-0.3
1,664,047	+				+1.6
1,664,047	+				-0.3
1,664,047	+				+0.8
1,664,048	-				+0.2
1,664,048	-				+0.6
1,664,048	-				+0.6
1,664,066	+				-0.0
1,664,220	+				-0.5
1,664,220	+				-0.5
1,664,220	+				-0.7
1,664,220	+				+0.0
1,664,220	+				+1.7
1,664,220	+				+0.1
1,664,220	+				+1.0
1,664,220	+				+0.5
1,664,220	+				-0.1
1,664,220	+				+0.7
1,664,220	+				+1.1
1,664,220	+				+0.2
1,664,220	+				-0.2
1,664,221	-				+0.5
1,664,221	-				-0.8
1,664,221	-				+0.7
1,664,221	-				+0.0
1,664,221	-				+0.5
1,664,221	-				+0.1
1,664,221	-				-0.0
1,664,221	-				+0.2
1,664,221	-				-0.0
1,664,221	-				-0.0
1,664,221	-				+0.7
1,664,221	-				-0.1
1,664,221	-				-0.4
1,664,221	-				+0.2
1,664,221	-				+0.8
1,664,221	-				-0.3
1,664,221	-				-0.8
1,664,221	-				+0.5
1,664,283	+				+0.2
1,664,283	+				+0.2
1,664,284	-				-0.1
1,664,284	-				-0.8
1,664,284	-				-0.7
1,664,284	-				+0.0
1,664,284	-				+0.1
1,664,408	+		Ga0059261_1587	0.32	+0.2
1,664,518	-		Ga0059261_1587	0.52	-0.2
1,664,596	-		Ga0059261_1587	0.66	-0.6
1,664,701	-		Ga0059261_1587	0.86	+0.2
1,664,710	+		Ga0059261_1587	0.87	+0.7
1,664,710	+		Ga0059261_1587	0.87	+0.3
1,664,710	+		Ga0059261_1587	0.87	+0.4
1,664,710	+		Ga0059261_1587	0.87	+0.2
1,664,710	+		Ga0059261_1587	0.87	+0.8
1,664,710	+		Ga0059261_1587	0.87	+1.0
1,664,710	+		Ga0059261_1587	0.87	+2.0
1,664,711	-		Ga0059261_1587	0.88	+0.2
1,664,711	-		Ga0059261_1587	0.88	+1.0
1,664,711	-		Ga0059261_1587	0.88	-0.3
1,664,711	-		Ga0059261_1587	0.88	+1.2
1,664,734	-				-1.1
1,664,734	-				-0.3
1,664,734	-				+0.4
1,664,734	-				-0.4
1,664,734	-				-0.6
1,664,847	-				-0.8
1,664,876	-				+0.5
1,664,876	-				+0.6
1,664,876	-				+0.0
1,664,968	+		Ga0059261_1588	0.21	+1.1
1,664,968	+		Ga0059261_1588	0.21	+0.2
1,664,968	+		Ga0059261_1588	0.21	+0.1
1,664,968	+		Ga0059261_1588	0.21	-0.0
1,664,968	+		Ga0059261_1588	0.21	+0.2
1,664,969	-		Ga0059261_1588	0.21	-0.2
1,664,969	-		Ga0059261_1588	0.21	-0.0
1,664,969	-		Ga0059261_1588	0.21	-1.0
1,665,199	+		Ga0059261_1588	0.51	+0.6
1,665,199	+		Ga0059261_1588	0.51	+0.7
1,665,199	+		Ga0059261_1588	0.51	-0.3
1,665,199	+		Ga0059261_1588	0.51	+0.8
1,665,200	-		Ga0059261_1588	0.51	+2.8
1,665,236	+		Ga0059261_1588	0.56	+0.2
1,665,236	+		Ga0059261_1588	0.56	+0.5
1,665,237	-		Ga0059261_1588	0.56	-0.8
1,665,472	+		Ga0059261_1588	0.87	+0.2
1,665,472	+		Ga0059261_1588	0.87	+0.1
1,665,472	+		Ga0059261_1588	0.87	+0.1
1,665,472	+		Ga0059261_1588	0.87	-0.5
1,665,473	-		Ga0059261_1588	0.87	+0.8
1,665,473	-		Ga0059261_1588	0.87	+0.2
1,665,473	-		Ga0059261_1588	0.87	+0.9
1,665,473	-		Ga0059261_1588	0.87	+0.2
1,665,473	-		Ga0059261_1588	0.87	-0.3
1,665,473	-		Ga0059261_1588	0.87	+0.4
1,665,473	-		Ga0059261_1588	0.87	+0.4
1,665,522	+				+0.2
1,665,522	+				+0.3
1,665,522	+				-0.1
1,665,522	+				+0.2
1,665,522	+				-1.1
1,665,522	+				+0.2
1,665,522	+				-0.5
1,665,523	-				+0.9
1,665,523	-				+1.5
1,665,523	-				+3.2
1,665,523	-				+0.6
1,665,523	-				+0.7
1,665,523	-				+1.6
1,665,523	-				+0.3
1,665,523	-				-0.8
1,665,523	-				-0.1
1,665,523	-				-0.9
1,665,523	-				+0.0
1,665,523	-				+0.3
1,665,558	-				+0.1