Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1585

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
1,660,226	+		Ga0059261_1584	0.34	-0.3
1,660,226	+		Ga0059261_1584	0.34	+0.8
1,660,226	+		Ga0059261_1584	0.34	+0.1
1,660,227	-		Ga0059261_1584	0.34	+0.2
1,660,227	-		Ga0059261_1584	0.34	+0.2
1,660,227	-		Ga0059261_1584	0.34	-0.2
1,660,227	-		Ga0059261_1584	0.34	-0.2
1,660,268	+		Ga0059261_1584	0.38	-0.0
1,660,277	+		Ga0059261_1584	0.39	-0.1
1,660,277	+		Ga0059261_1584	0.39	-0.1
1,660,277	+		Ga0059261_1584	0.39	+0.5
1,660,278	-		Ga0059261_1584	0.39	-0.6
1,660,278	-		Ga0059261_1584	0.39	-0.3
1,660,286	+		Ga0059261_1584	0.40	-0.1
1,660,287	-		Ga0059261_1584	0.40	+0.7
1,660,287	-		Ga0059261_1584	0.40	+0.1
1,660,321	+		Ga0059261_1584	0.43	+0.2
1,660,322	-		Ga0059261_1584	0.43	-1.9
1,660,603	+		Ga0059261_1584	0.70	+0.8
1,660,603	+				+1.2
1,660,733	-		Ga0059261_1584	0.83	+1.1
1,660,773	+		Ga0059261_1584	0.87	+0.2
1,660,774	-		Ga0059261_1584	0.87	-0.2
1,660,774	-		Ga0059261_1584	0.87	-0.2
1,660,829	-				-0.7
1,660,854	+				+1.7
1,660,854	+				-0.9
1,660,854	+				+0.6
1,660,854	+				-0.2
1,660,854	+				+0.4
1,660,854	+				-0.6
1,660,855	-				-0.1
1,660,855	-				-0.1
1,660,855	-				+0.5
1,660,855	-				-0.3
1,660,855	-				+2.8
1,660,855	-				+0.2
1,660,904	+				-0.4
1,660,905	-				+1.9
1,661,080	+				-0.2
1,661,080	+				+2.5
1,661,080	+				-0.3
1,661,080	+				+0.8
1,661,080	+				+0.5
1,661,080	+				+1.4
1,661,080	+				-0.8
1,661,080	+				+0.2
1,661,080	+				-0.1
1,661,081	-				-0.5
1,661,081	-				+0.2
1,661,081	-				+0.5
1,661,081	-				+1.2
1,661,081	-				+0.1
1,661,081	-				-0.5
1,661,211	+				+0.3
1,661,279	+		Ga0059261_1585	0.13	-1.1
1,661,279	+		Ga0059261_1585	0.13	-0.8
1,661,279	+		Ga0059261_1585	0.13	+0.5
1,661,279	+				-0.8
1,661,279	+		Ga0059261_1585	0.13	+0.0
1,661,279	+		Ga0059261_1585	0.13	+1.1
1,661,279	+		Ga0059261_1585	0.13	+0.2
1,661,279	+		Ga0059261_1585	0.13	-1.1
1,661,280	-		Ga0059261_1585	0.13	+0.0
1,661,280	-		Ga0059261_1585	0.13	-0.3
1,661,280	-		Ga0059261_1585	0.13	+1.7
1,661,280	-				+2.2
1,661,280	-		Ga0059261_1585	0.13	-0.3
1,661,280	-				+0.7
1,661,280	-		Ga0059261_1585	0.13	+0.3
1,661,280	-		Ga0059261_1585	0.13	+0.6
1,661,325	+		Ga0059261_1585	0.16	-0.3
1,661,325	+		Ga0059261_1585	0.16	-0.8
1,661,326	-		Ga0059261_1585	0.16	-0.2
1,661,326	-		Ga0059261_1585	0.16	+1.0
1,661,326	-		Ga0059261_1585	0.16	-0.7
1,661,502	+		Ga0059261_1585	0.28	+1.2
1,661,582	-		Ga0059261_1585	0.34	+0.4
1,661,582	-		Ga0059261_1585	0.34	-2.1
1,661,583	+		Ga0059261_1585	0.34	+0.7
1,661,626	-		Ga0059261_1585	0.37	+0.1
1,661,626	-		Ga0059261_1585	0.37	-0.2
1,661,695	-		Ga0059261_1585	0.41	+0.2
1,661,695	-		Ga0059261_1585	0.41	-0.8
1,661,695	-		Ga0059261_1585	0.41	+0.2
1,661,853	+		Ga0059261_1585	0.52	+1.2
1,661,859	+		Ga0059261_1585	0.52	+0.1
1,661,859	+		Ga0059261_1585	0.52	+1.1
1,661,859	+		Ga0059261_1585	0.52	-0.4
1,661,859	+		Ga0059261_1585	0.52	-0.9
1,661,859	+		Ga0059261_1585	0.52	+0.3
1,661,859	+		Ga0059261_1585	0.52	+0.0
1,661,859	+		Ga0059261_1585	0.52	+1.2
1,661,859	+		Ga0059261_1585	0.52	-1.0
1,661,859	+		Ga0059261_1585	0.52	+0.9
1,661,859	+		Ga0059261_1585	0.52	-0.1
1,661,860	-		Ga0059261_1585	0.52	+0.0
1,661,860	-		Ga0059261_1585	0.52	-1.0
1,661,860	-		Ga0059261_1585	0.52	-0.1
1,661,860	-		Ga0059261_1585	0.52	-0.3
1,661,860	-		Ga0059261_1585	0.52	+0.3
1,661,860	-		Ga0059261_1585	0.52	+0.4
1,661,860	-		Ga0059261_1585	0.52	+0.8
1,661,860	-		Ga0059261_1585	0.52	+0.1
1,661,860	-		Ga0059261_1585	0.52	-1.1
1,661,954	+				+0.8
1,661,954	+		Ga0059261_1585	0.59	+0.1
1,661,955	-		Ga0059261_1585	0.59	+0.7
1,661,955	-		Ga0059261_1585	0.59	+0.9
1,661,955	-		Ga0059261_1585	0.59	+0.1
1,662,072	+		Ga0059261_1585	0.67	-0.5
1,662,072	+		Ga0059261_1585	0.67	+0.3
1,662,072	+		Ga0059261_1585	0.67	+0.1
1,662,073	-		Ga0059261_1585	0.67	+0.9
1,662,073	-		Ga0059261_1585	0.67	+0.1
1,662,078	+		Ga0059261_1585	0.67	+1.7
1,662,078	+		Ga0059261_1585	0.67	+0.8
1,662,079	-		Ga0059261_1585	0.67	+0.2
1,662,079	-		Ga0059261_1585	0.67	+0.6
1,662,079	-		Ga0059261_1585	0.67	+0.0
1,662,080	+		Ga0059261_1585	0.67	-0.8
1,662,081	-		Ga0059261_1585	0.67	-0.0
1,662,108	+		Ga0059261_1585	0.69	+0.2
1,662,109	-		Ga0059261_1585	0.69	+0.1
1,662,130	+		Ga0059261_1585	0.71	+0.3
1,662,150	+		Ga0059261_1585	0.72	-0.8
1,662,150	+		Ga0059261_1585	0.72	+1.4
1,662,150	+		Ga0059261_1585	0.72	-0.6
1,662,150	+		Ga0059261_1585	0.72	-0.1
1,662,150	+		Ga0059261_1585	0.72	+0.1
1,662,150	+		Ga0059261_1585	0.72	-1.3
1,662,150	+		Ga0059261_1585	0.72	-0.3
1,662,151	-		Ga0059261_1585	0.72	+0.8
1,662,151	-		Ga0059261_1585	0.72	+0.2
1,662,151	-		Ga0059261_1585	0.72	-0.1
1,662,151	-		Ga0059261_1585	0.72	+0.2
1,662,152	+		Ga0059261_1585	0.72	-0.1
1,662,152	+		Ga0059261_1585	0.72	-0.1
1,662,227	+		Ga0059261_1585	0.77	+0.0
1,662,227	+		Ga0059261_1585	0.77	+0.3
1,662,227	+		Ga0059261_1585	0.77	+0.1
1,662,227	+		Ga0059261_1585	0.77	+0.7
1,662,227	+		Ga0059261_1585	0.77	-0.3
1,662,227	+		Ga0059261_1585	0.77	+0.2
1,662,227	+		Ga0059261_1585	0.77	-0.4
1,662,228	-		Ga0059261_1585	0.77	+0.5
1,662,228	-		Ga0059261_1585	0.77	+0.6
1,662,228	-		Ga0059261_1585	0.77	+0.2
1,662,351	+		Ga0059261_1585	0.85	-0.3
1,662,351	+		Ga0059261_1585	0.85	+0.5
1,662,351	+		Ga0059261_1585	0.85	+0.2
1,662,351	+		Ga0059261_1585	0.85	+1.2
1,662,351	+		Ga0059261_1585	0.85	+0.7
1,662,352	-		Ga0059261_1585	0.86	-0.8
1,662,352	-		Ga0059261_1585	0.86	+0.7
1,662,352	-		Ga0059261_1585	0.86	-0.4
1,662,352	-		Ga0059261_1585	0.86	-0.3
1,662,352	-		Ga0059261_1585	0.86	-0.6
1,662,352	-		Ga0059261_1585	0.86	-0.2
1,662,396	+		Ga0059261_1585	0.88	+0.6
1,662,396	+		Ga0059261_1585	0.88	+1.2
1,662,396	+		Ga0059261_1585	0.88	+0.1
1,662,396	+		Ga0059261_1585	0.88	+0.5
1,662,396	+		Ga0059261_1585	0.88	-0.2
1,662,396	+		Ga0059261_1585	0.88	+0.5
1,662,396	+		Ga0059261_1585	0.88	-0.1
1,662,396	+		Ga0059261_1585	0.88	+0.3
1,662,396	+		Ga0059261_1585	0.88	+0.6
1,662,396	+		Ga0059261_1585	0.88	+0.6
1,662,396	+		Ga0059261_1585	0.88	+0.1
1,662,396	+		Ga0059261_1585	0.88	+0.1
1,662,396	+		Ga0059261_1585	0.88	+0.5
1,662,396	+		Ga0059261_1585	0.88	+0.9
1,662,396	+		Ga0059261_1585	0.88	+0.9
1,662,396	+		Ga0059261_1585	0.88	-1.1
1,662,396	+		Ga0059261_1585	0.88	+0.0
1,662,396	+		Ga0059261_1585	0.88	-0.1
1,662,396	+		Ga0059261_1585	0.88	-1.6
1,662,396	+		Ga0059261_1585	0.88	+1.2
1,662,396	+		Ga0059261_1585	0.88	+1.4
1,662,396	+		Ga0059261_1585	0.88	-0.6
1,662,396	+		Ga0059261_1585	0.88	+0.8
1,662,396	+		Ga0059261_1585	0.88	-0.1
1,662,397	-		Ga0059261_1585	0.89	+1.2
1,662,397	-		Ga0059261_1585	0.89	-0.1
1,662,397	-		Ga0059261_1585	0.89	-1.0
1,662,397	-		Ga0059261_1585	0.89	-0.1
1,662,397	-		Ga0059261_1585	0.89	+0.0
1,662,397	-		Ga0059261_1585	0.89	-1.2
1,662,397	-		Ga0059261_1585	0.89	+0.0
1,662,397	-		Ga0059261_1585	0.89	-0.5
1,662,397	-		Ga0059261_1585	0.89	+1.9
1,662,397	-		Ga0059261_1585	0.89	+0.1
1,662,397	-		Ga0059261_1585	0.89	+0.7
1,662,397	-		Ga0059261_1585	0.89	+0.2
1,662,397	-		Ga0059261_1585	0.89	+0.2
1,662,397	-		Ga0059261_1585	0.89	+0.8
1,662,397	-		Ga0059261_1585	0.89	+0.5
1,662,397	-				+1.2
1,662,397	-		Ga0059261_1585	0.89	+0.5
1,662,397	-		Ga0059261_1585	0.89	+1.2
1,662,397	-		Ga0059261_1585	0.89	+0.2
1,662,397	-		Ga0059261_1585	0.89	-0.2
1,662,397	-		Ga0059261_1585	0.89	+1.2
1,662,397	-		Ga0059261_1585	0.89	+0.3
1,662,397	-		Ga0059261_1585	0.89	+0.5
1,662,397	-		Ga0059261_1585	0.89	+0.2
1,662,398	+		Ga0059261_1585	0.89	+0.4
1,662,398	+		Ga0059261_1585	0.89	-0.5
1,662,398	+		Ga0059261_1585	0.89	+0.1
1,662,398	+		Ga0059261_1585	0.89	+0.1
1,662,399	-		Ga0059261_1585	0.89	+0.1
1,662,399	-		Ga0059261_1585	0.89	+0.3
1,662,399	-		Ga0059261_1585	0.89	-0.9
1,662,399	-		Ga0059261_1585	0.89	+0.0
1,662,564	+				+1.0
1,662,564	+				+0.2
1,662,564	+				-0.5
1,662,564	+				-0.8
1,662,565	-				-0.1
1,662,565	-				+2.2
1,662,720	+				+0.0
1,662,721	-				+0.1
1,662,783	+				+1.1
1,662,783	+				+1.5
1,662,784	-				-0.3
1,662,784	-				+0.0
1,662,784	-				+0.9
1,662,784	-				+2.0
1,663,045	+		Ga0059261_1586	0.23	+0.1
1,663,046	-				+1.2
1,663,046	-		Ga0059261_1586	0.23	-0.7
1,663,046	-		Ga0059261_1586	0.23	-0.8
1,663,046	-		Ga0059261_1586	0.23	+1.8
1,663,227	+		Ga0059261_1586	0.36	+0.1
1,663,227	+		Ga0059261_1586	0.36	+1.2
1,663,227	+		Ga0059261_1586	0.36	+0.1
1,663,228	-		Ga0059261_1586	0.36	-0.5
1,663,228	-		Ga0059261_1586	0.36	+0.3
1,663,228	-		Ga0059261_1586	0.36	-1.6
1,663,228	-		Ga0059261_1586	0.36	+0.2
1,663,401	+		Ga0059261_1586	0.48	-0.0
1,663,401	+		Ga0059261_1586	0.48	-1.4
1,663,401	+		Ga0059261_1586	0.48	-0.7
1,663,450	+		Ga0059261_1586	0.51	-0.0
1,663,450	+		Ga0059261_1586	0.51	+0.4
1,663,451	-		Ga0059261_1586	0.51	+0.5
1,663,497	+		Ga0059261_1586	0.54	+0.6
1,663,497	+		Ga0059261_1586	0.54	+0.6
1,663,497	+		Ga0059261_1586	0.54	-0.3
1,663,498	-		Ga0059261_1586	0.55	+1.0