Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1577

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
1,646,759	+				-0.3
1,646,759	+				+0.1
1,646,760	-				+0.1
1,646,760	-				+1.0
1,646,835	+				+0.3
1,646,836	-				+0.7
1,646,836	-				+0.5
1,646,848	+		Ga0059261_1576	0.10	+0.4
1,646,849	-		Ga0059261_1576	0.10	+0.5
1,646,849	-		Ga0059261_1576	0.10	+0.4
1,646,857	-		Ga0059261_1576	0.11	+0.1
1,646,857	-		Ga0059261_1576	0.11	+0.4
1,646,857	-		Ga0059261_1576	0.11	+0.8
1,646,999	+		Ga0059261_1576	0.28	-0.1
1,647,000	-		Ga0059261_1576	0.28	+0.7
1,647,000	-		Ga0059261_1576	0.28	+0.7
1,647,000	-		Ga0059261_1576	0.28	+0.6
1,647,000	-		Ga0059261_1576	0.28	+0.1
1,647,000	-		Ga0059261_1576	0.28	-0.6
1,647,026	+		Ga0059261_1576	0.31	+0.2
1,647,027	-		Ga0059261_1576	0.31	+0.9
1,647,104	+		Ga0059261_1576	0.40	+0.2
1,647,155	+		Ga0059261_1576	0.46	-0.5
1,647,155	+		Ga0059261_1576	0.46	+0.5
1,647,155	+		Ga0059261_1576	0.46	-0.9
1,647,155	+		Ga0059261_1576	0.46	+1.0
1,647,156	-		Ga0059261_1576	0.46	+0.7
1,647,156	-		Ga0059261_1576	0.46	+0.6
1,647,156	-		Ga0059261_1576	0.46	-2.6
1,647,156	-		Ga0059261_1576	0.46	-0.5
1,647,156	-		Ga0059261_1576	0.46	-0.4
1,647,156	-		Ga0059261_1576	0.46	-0.6
1,647,156	-		Ga0059261_1576	0.46	+0.3
1,647,156	-		Ga0059261_1576	0.46	-0.4
1,647,156	-		Ga0059261_1576	0.46	-0.2
1,647,159	+		Ga0059261_1576	0.46	+0.9
1,647,159	+		Ga0059261_1576	0.46	-0.5
1,647,159	+		Ga0059261_1576	0.46	+0.7
1,647,159	+		Ga0059261_1576	0.46	-0.0
1,647,160	-		Ga0059261_1576	0.46	+1.1
1,647,272	+		Ga0059261_1576	0.59	+0.7
1,647,272	+		Ga0059261_1576	0.59	-1.6
1,647,272	+		Ga0059261_1576	0.59	+0.9
1,647,272	+		Ga0059261_1576	0.59	+0.5
1,647,272	+		Ga0059261_1576	0.59	-0.4
1,647,272	+		Ga0059261_1576	0.59	-0.3
1,647,273	-		Ga0059261_1576	0.59	+0.2
1,647,273	-		Ga0059261_1576	0.59	+0.8
1,647,273	-		Ga0059261_1576	0.59	-0.2
1,647,273	-		Ga0059261_1576	0.59	+0.5
1,647,331	-		Ga0059261_1576	0.66	-0.8
1,647,584	+				+0.2
1,647,584	+				+1.0
1,647,584	+				+0.8
1,647,584	+				+0.3
1,647,584	+				+0.2
1,647,584	+				-0.2
1,647,584	+				+0.1
1,647,585	-				+0.2
1,647,585	-				+0.5
1,647,585	-				-0.6
1,647,585	-				-0.8
1,647,585	-				-0.2
1,647,585	-				+0.9
1,647,585	-				-0.1
1,647,585	-				+0.3
1,647,585	-				+0.4
1,647,585	-				-0.0
1,647,613	-				+0.4
1,647,670	+				+2.4
1,647,670	+				-0.4
1,647,671	-				+0.8
1,647,671	-				+0.2
1,647,742	+				+0.1
1,647,742	+				+1.2
1,647,742	+				-0.1
1,647,742	+				-0.0
1,647,742	+				+1.2
1,647,742	+				+0.9
1,647,743	-				+0.1
1,647,743	-				+0.1
1,647,743	-				+1.0
1,647,743	-				+0.8
1,647,743	-				+0.3
1,647,743	-				+0.9
1,647,757	-				-0.0
1,647,810	-		Ga0059261_1577	0.13	+0.2
1,647,810	-		Ga0059261_1577	0.13	+0.7
1,647,872	+		Ga0059261_1577	0.18	+0.3
1,648,070	+		Ga0059261_1577	0.32	-0.3
1,648,071	-		Ga0059261_1577	0.32	+0.1
1,648,071	-		Ga0059261_1577	0.32	+0.2
1,648,216	+		Ga0059261_1577	0.42	+0.0
1,648,216	+		Ga0059261_1577	0.42	-0.0
1,648,216	+		Ga0059261_1577	0.42	+0.9
1,648,216	+		Ga0059261_1577	0.42	+0.7
1,648,216	+		Ga0059261_1577	0.42	-0.7
1,648,216	+		Ga0059261_1577	0.42	-0.0
1,648,217	-		Ga0059261_1577	0.42	+0.0
1,648,217	-		Ga0059261_1577	0.42	+1.5
1,648,217	-		Ga0059261_1577	0.42	-0.0
1,648,217	-		Ga0059261_1577	0.42	+0.7
1,648,217	-		Ga0059261_1577	0.42	+0.8
1,648,217	-		Ga0059261_1577	0.42	+0.1
1,648,217	-		Ga0059261_1577	0.42	-0.4
1,648,319	-		Ga0059261_1577	0.49	+0.4
1,648,319	-		Ga0059261_1577	0.49	+0.7
1,648,319	-		Ga0059261_1577	0.49	-0.6
1,648,435	+		Ga0059261_1577	0.57	+0.8
1,648,651	+		Ga0059261_1577	0.73	+0.2
1,648,651	+		Ga0059261_1577	0.73	+0.6
1,648,651	+		Ga0059261_1577	0.73	-0.8
1,648,693	+		Ga0059261_1577	0.76	+0.1
1,648,694	-		Ga0059261_1577	0.76	+0.3
1,648,694	-		Ga0059261_1577	0.76	-1.0
1,648,750	+				+0.2
1,648,750	+		Ga0059261_1577	0.80	-0.2
1,648,750	+		Ga0059261_1577	0.80	+0.7
1,648,750	+		Ga0059261_1577	0.80	+0.4
1,648,750	+		Ga0059261_1577	0.80	+0.6
1,648,750	+		Ga0059261_1577	0.80	-0.0
1,648,751	-		Ga0059261_1577	0.80	+0.5
1,648,751	-		Ga0059261_1577	0.80	-0.1
1,648,751	-		Ga0059261_1577	0.80	+0.1
1,648,751	-		Ga0059261_1577	0.80	+1.0
1,648,751	-		Ga0059261_1577	0.80	+0.2
1,648,751	-		Ga0059261_1577	0.80	-0.1
1,648,751	-		Ga0059261_1577	0.80	+0.1
1,648,751	-		Ga0059261_1577	0.80	+0.5
1,648,751	-		Ga0059261_1577	0.80	-0.3
1,648,751	-		Ga0059261_1577	0.80	-0.1
1,648,751	-		Ga0059261_1577	0.80	+0.8
1,648,751	-		Ga0059261_1577	0.80	-0.5
1,648,756	+		Ga0059261_1577	0.80	+0.6
1,648,756	+		Ga0059261_1577	0.80	+0.9
1,648,756	+		Ga0059261_1577	0.80	-0.2
1,648,756	+		Ga0059261_1577	0.80	+0.9
1,648,757	-		Ga0059261_1577	0.80	-0.1
1,648,757	-		Ga0059261_1577	0.80	-0.1
1,648,757	-		Ga0059261_1577	0.80	-1.1
1,648,757	-		Ga0059261_1577	0.80	+0.6
1,648,757	-		Ga0059261_1577	0.80	+0.3
1,648,757	-		Ga0059261_1577	0.80	+0.0
1,648,757	-		Ga0059261_1577	0.80	-0.2
1,648,757	-		Ga0059261_1577	0.80	+0.6
1,648,757	-		Ga0059261_1577	0.80	+0.6
1,648,757	-		Ga0059261_1577	0.80	-0.0
1,648,757	-		Ga0059261_1577	0.80	+0.2
1,648,757	-		Ga0059261_1577	0.80	+0.6
1,648,757	-		Ga0059261_1577	0.80	+0.8
1,648,762	+		Ga0059261_1577	0.81	+0.1
1,648,762	+		Ga0059261_1577	0.81	-0.6
1,648,804	+		Ga0059261_1577	0.84	-0.3
1,648,804	+		Ga0059261_1577	0.84	+1.2
1,648,805	-		Ga0059261_1577	0.84	+1.2
1,648,938	+				+0.9
1,648,962	-				-0.5
1,649,036	+				+0.0
1,649,036	+				+0.5
1,649,036	+				-1.3
1,649,036	+				+1.7
1,649,036	+				+0.6
1,649,036	+				-0.1
1,649,036	+				+0.3
1,649,037	-				+0.4
1,649,037	-				-0.1
1,649,037	-				+0.0
1,649,037	-				-0.0
1,649,037	-				+1.2
1,649,142	+				+0.3
1,649,260	-		Ga0059261_1578	0.19	+0.5
1,649,405	+		Ga0059261_1578	0.48	+0.6
1,649,405	+		Ga0059261_1578	0.48	-0.2
1,649,405	+		Ga0059261_1578	0.48	+0.9
1,649,405	+		Ga0059261_1578	0.48	+0.4
1,649,405	+		Ga0059261_1578	0.48	+0.7
1,649,406	-		Ga0059261_1578	0.48	+0.3
1,649,406	-		Ga0059261_1578	0.48	+1.2
1,649,406	-		Ga0059261_1578	0.48	-1.8
1,649,406	-		Ga0059261_1578	0.48	-0.4
1,649,499	+		Ga0059261_1578	0.66	-0.2
1,649,500	-		Ga0059261_1578	0.66	-0.8
1,649,500	-		Ga0059261_1578	0.66	-0.4
1,649,500	-		Ga0059261_1578	0.66	-0.5
1,649,500	-		Ga0059261_1578	0.66	+0.3
1,649,500	-				+2.2
1,649,568	-		Ga0059261_1578	0.80	+1.2
1,649,568	-		Ga0059261_1578	0.80	-0.2
1,649,601	+		Ga0059261_1578	0.86	-0.0
1,649,782	+				+0.1
1,649,782	+				+0.1
1,649,782	+				+0.2
1,649,782	+				+0.7
1,649,782	+				-0.4
1,649,782	+				+0.7
1,649,782	+				+0.6
1,649,782	+				-0.8
1,649,782	+				-1.0
1,649,783	-				+0.1
1,649,783	-				-1.1
1,649,783	-				+0.3
1,649,783	-				-0.2
1,649,783	-				+0.2
1,649,783	-				+0.1
1,649,783	-				+0.1
1,649,795	+				+0.5
1,649,796	-				+0.5
1,649,830	+				+0.5
1,649,830	+				+0.1
1,649,831	-				-0.8
1,649,831	-				+0.5
1,649,831	-				+0.5
1,649,845	+				-0.8
1,649,845	+				+0.6
1,649,845	+				+0.8
1,649,845	+				+0.2
1,649,845	+				+0.8
1,649,845	+				+0.7
1,649,846	-				+0.7
1,649,846	-				+1.5
1,649,846	-				-0.4
1,649,846	-				+1.2
1,649,846	-				+2.0
1,649,920	+		Ga0059261_1579	0.11	+1.0
1,649,920	+				+1.7
1,649,920	+		Ga0059261_1579	0.11	-0.2
1,649,920	+		Ga0059261_1579	0.11	-0.0
1,649,921	-		Ga0059261_1579	0.11	+0.2
1,649,921	-		Ga0059261_1579	0.11	+0.2
1,649,921	-		Ga0059261_1579	0.11	+1.0
1,649,962	+		Ga0059261_1579	0.13	+0.1
1,649,962	+		Ga0059261_1579	0.13	-0.8
1,649,962	+		Ga0059261_1579	0.13	-0.3
1,649,962	+		Ga0059261_1579	0.13	+0.4
1,649,962	+		Ga0059261_1579	0.13	-0.4
1,649,963	-		Ga0059261_1579	0.13	-0.5