Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1232

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
1,289,687	+		Ga0059261_1230	0.77	-1.4
1,289,687	+		Ga0059261_1230	0.77	-0.0
1,289,687	+		Ga0059261_1230	0.77	-0.2
1,289,688	-		Ga0059261_1230	0.77	-0.9
1,289,688	-		Ga0059261_1230	0.77	-0.1
1,289,773	+		Ga0059261_1230	0.82	-0.1
1,289,774	-		Ga0059261_1230	0.82	-0.1
1,289,774	-		Ga0059261_1230	0.82	+0.2
1,289,774	-		Ga0059261_1230	0.82	-0.1
1,289,776	+		Ga0059261_1230	0.82	+0.1
1,289,776	+		Ga0059261_1230	0.82	+0.6
1,289,776	+		Ga0059261_1230	0.82	+0.2
1,289,777	-		Ga0059261_1230	0.82	-0.2
1,289,777	-		Ga0059261_1230	0.82	-0.8
1,289,777	-		Ga0059261_1230	0.82	+0.4
1,289,777	-		Ga0059261_1230	0.82	-1.1
1,289,959	+				+1.0
1,289,959	+				+0.1
1,289,960	-				-0.2
1,289,960	-				-0.2
1,289,966	+				+0.3
1,289,966	+				+0.0
1,289,967	-				-1.1
1,289,967	-				+0.7
1,290,004	-				-0.2
1,290,046	+				-0.4
1,290,046	+				-0.1
1,290,046	+				-1.8
1,290,046	+				-0.7
1,290,046	+				-0.2
1,290,046	+				-1.8
1,290,046	+				-0.4
1,290,046	+				-1.1
1,290,047	-				-0.0
1,290,047	-				-0.3
1,290,047	-				-0.2
1,290,047	-				-0.4
1,290,047	-				-0.2
1,290,047	-				-0.6
1,290,047	-				-0.6
1,290,047	-				+0.2
1,290,104	+				+0.2
1,290,104	+				-0.6
1,290,104	+				-0.0
1,290,104	+				+0.3
1,290,104	+				+0.4
1,290,105	-				+0.2
1,290,105	-				-0.6
1,290,105	-				+0.3
1,290,105	-				-1.2
1,290,366	+		Ga0059261_1231	0.55	-0.1
1,290,366	+		Ga0059261_1231	0.55	-0.3
1,290,366	+		Ga0059261_1231	0.55	-0.3
1,290,366	+		Ga0059261_1231	0.55	-1.4
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	+0.5
1,290,366	+		Ga0059261_1231	0.55	+0.3
1,290,366	+		Ga0059261_1231	0.55	+0.6
1,290,366	+		Ga0059261_1231	0.55	+0.0
1,290,366	+		Ga0059261_1231	0.55	+0.6
1,290,366	+		Ga0059261_1231	0.55	-0.4
1,290,366	+		Ga0059261_1231	0.55	+1.4
1,290,366	+		Ga0059261_1231	0.55	-0.6
1,290,366	+		Ga0059261_1231	0.55	+1.7
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	+0.0
1,290,366	+		Ga0059261_1231	0.55	-1.1
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	+1.2
1,290,366	+		Ga0059261_1231	0.55	-0.6
1,290,366	+		Ga0059261_1231	0.55	+0.2
1,290,366	+		Ga0059261_1231	0.55	-1.9
1,290,366	+		Ga0059261_1231	0.55	-0.6
1,290,367	-		Ga0059261_1231	0.56	-0.4
1,290,367	-				-0.4
1,290,367	-		Ga0059261_1231	0.56	-0.3
1,290,367	-		Ga0059261_1231	0.56	-0.3
1,290,367	-		Ga0059261_1231	0.56	+0.1
1,290,367	-		Ga0059261_1231	0.56	-1.7
1,290,367	-		Ga0059261_1231	0.56	-0.7
1,290,367	-		Ga0059261_1231	0.56	+1.2
1,290,367	-		Ga0059261_1231	0.56	+0.3
1,290,367	-		Ga0059261_1231	0.56	-1.0
1,290,367	-		Ga0059261_1231	0.56	+0.2
1,290,367	-		Ga0059261_1231	0.56	+0.9
1,290,367	-		Ga0059261_1231	0.56	-0.7
1,290,367	-		Ga0059261_1231	0.56	-1.3
1,290,367	-		Ga0059261_1231	0.56	-0.7
1,290,367	-		Ga0059261_1231	0.56	-0.8
1,290,367	-		Ga0059261_1231	0.56	+0.6
1,290,367	-		Ga0059261_1231	0.56	-0.8
1,290,367	-		Ga0059261_1231	0.56	-1.7
1,290,367	-		Ga0059261_1231	0.56	-1.4
1,290,367	-		Ga0059261_1231	0.56	-0.3
1,290,367	-		Ga0059261_1231	0.56	+0.0
1,290,367	-		Ga0059261_1231	0.56	-0.2
1,290,367	-		Ga0059261_1231	0.56	+0.8
1,290,370	+		Ga0059261_1231	0.56	+0.3
1,290,370	+		Ga0059261_1231	0.56	+1.2
1,290,370	+		Ga0059261_1231	0.56	-1.5
1,290,370	+		Ga0059261_1231	0.56	+0.3
1,290,370	+		Ga0059261_1231	0.56	-1.0
1,290,370	+		Ga0059261_1231	0.56	+0.2
1,290,370	+		Ga0059261_1231	0.56	-0.3
1,290,370	+		Ga0059261_1231	0.56	-0.1
1,290,371	-		Ga0059261_1231	0.56	+0.2
1,290,371	-		Ga0059261_1231	0.56	-0.0
1,290,371	-		Ga0059261_1231	0.56	-0.1
1,290,371	-		Ga0059261_1231	0.56	+0.1
1,290,371	-		Ga0059261_1231	0.56	-0.4
1,290,492	+		Ga0059261_1231	0.83	+0.2
1,290,492	+		Ga0059261_1231	0.83	-0.3
1,290,493	-		Ga0059261_1231	0.83	+0.9
1,290,493	-		Ga0059261_1231	0.83	-0.0
1,290,493	-		Ga0059261_1231	0.83	-1.8
1,290,493	-		Ga0059261_1231	0.83	-0.4
1,290,690	+				+0.2
1,290,708	+				+0.2
1,290,708	+				+1.0
1,290,708	+				-0.8
1,290,708	+				+1.2
1,290,709	-				+0.1
1,290,709	-				-0.1
1,290,709	-				-0.3
1,290,709	-				-0.4
1,290,709	-				-0.1
1,290,752	+				+0.3
1,290,753	-				+0.8
1,290,934	-		Ga0059261_1232	0.15	-1.8
1,290,934	-		Ga0059261_1232	0.15	-1.2
1,290,939	+		Ga0059261_1232	0.15	-0.6
1,290,939	+		Ga0059261_1232	0.15	-0.1
1,291,005	-		Ga0059261_1232	0.18	-0.4
1,291,005	-		Ga0059261_1232	0.18	+0.1
1,291,080	+		Ga0059261_1232	0.22	-1.2
1,291,080	+		Ga0059261_1232	0.22	-0.7
1,291,167	+		Ga0059261_1232	0.25	+0.5
1,291,168	-		Ga0059261_1232	0.25	-0.3
1,291,237	-		Ga0059261_1232	0.28	+1.2
1,291,280	+		Ga0059261_1232	0.30	+0.2
1,291,280	+		Ga0059261_1232	0.30	-0.4
1,291,280	+		Ga0059261_1232	0.30	-0.6
1,291,281	-		Ga0059261_1232	0.30	-0.2
1,291,281	-		Ga0059261_1232	0.30	-0.4
1,291,301	+		Ga0059261_1232	0.31	-0.1
1,291,301	+		Ga0059261_1232	0.31	+0.6
1,291,302	-		Ga0059261_1232	0.31	-0.3
1,291,302	-		Ga0059261_1232	0.31	+0.4
1,291,302	-		Ga0059261_1232	0.31	+0.2
1,291,302	-		Ga0059261_1232	0.31	-0.4
1,291,448	+		Ga0059261_1232	0.38	-0.7
1,291,448	+		Ga0059261_1232	0.38	+0.2
1,291,448	+		Ga0059261_1232	0.38	-0.2
1,291,448	+		Ga0059261_1232	0.38	-0.6
1,291,448	+		Ga0059261_1232	0.38	+0.2
1,291,448	+		Ga0059261_1232	0.38	-0.5
1,291,448	+				+1.2
1,291,449	-		Ga0059261_1232	0.38	-1.2
1,291,449	-		Ga0059261_1232	0.38	-0.4
1,291,449	-		Ga0059261_1232	0.38	-0.3
1,291,583	+		Ga0059261_1232	0.44	-0.9
1,291,584	-		Ga0059261_1232	0.44	-0.1
1,291,584	-		Ga0059261_1232	0.44	+0.2
1,291,584	-		Ga0059261_1232	0.44	-1.1
1,291,695	+		Ga0059261_1232	0.49	+0.2
1,291,695	+		Ga0059261_1232	0.49	-1.2
1,291,695	+		Ga0059261_1232	0.49	-0.8
1,291,695	+		Ga0059261_1232	0.49	+1.1
1,291,695	+		Ga0059261_1232	0.49	+0.2
1,291,695	+		Ga0059261_1232	0.49	+0.4
1,291,695	+		Ga0059261_1232	0.49	+0.3
1,291,696	-		Ga0059261_1232	0.49	+0.2
1,291,696	-		Ga0059261_1232	0.49	+0.8
1,291,696	-				+0.6
1,291,696	-		Ga0059261_1232	0.49	-0.8
1,291,696	-		Ga0059261_1232	0.49	-1.4
1,291,775	+		Ga0059261_1232	0.52	+0.7
1,291,775	+		Ga0059261_1232	0.52	+0.6
1,291,775	+		Ga0059261_1232	0.52	+0.7
1,291,775	+		Ga0059261_1232	0.52	+0.2
1,291,775	+		Ga0059261_1232	0.52	+0.3
1,291,775	+		Ga0059261_1232	0.52	-0.3
1,291,775	+		Ga0059261_1232	0.52	+0.3
1,291,775	+		Ga0059261_1232	0.52	+0.3
1,291,776	-		Ga0059261_1232	0.52	-0.1
1,291,776	-		Ga0059261_1232	0.52	+0.5
1,291,776	-		Ga0059261_1232	0.52	-1.4
1,291,835	+		Ga0059261_1232	0.55	+0.6
1,292,258	+		Ga0059261_1232	0.74	+0.3
1,292,258	+				+1.2
1,292,259	-		Ga0059261_1232	0.74	-0.4
1,292,259	-		Ga0059261_1232	0.74	-0.2
1,292,371	+		Ga0059261_1232	0.79	+0.2
1,292,371	+		Ga0059261_1232	0.79	-1.4
1,292,371	+		Ga0059261_1232	0.79	-1.0
1,292,371	+		Ga0059261_1232	0.79	-0.4
1,292,371	+		Ga0059261_1232	0.79	+0.0
1,292,371	+		Ga0059261_1232	0.79	+0.3
1,292,372	-		Ga0059261_1232	0.79	-0.2
1,292,372	-		Ga0059261_1232	0.79	-0.1
1,292,372	-		Ga0059261_1232	0.79	+0.3
1,292,372	-		Ga0059261_1232	0.79	-0.3
1,292,372	-		Ga0059261_1232	0.79	+0.2
1,292,372	-		Ga0059261_1232	0.79	-2.4
1,292,451	+		Ga0059261_1232	0.82	-0.3
1,292,451	+		Ga0059261_1232	0.82	-0.7
1,292,452	-		Ga0059261_1232	0.82	-0.0
1,292,452	-		Ga0059261_1232	0.82	+1.6
1,292,463	+		Ga0059261_1232	0.83	+0.3
1,292,463	+		Ga0059261_1232	0.83	-0.8
1,292,464	-		Ga0059261_1232	0.83	-0.1
1,292,464	-		Ga0059261_1232	0.83	-0.4
1,292,601	+		Ga0059261_1232	0.89	+0.1
1,292,601	+		Ga0059261_1232	0.89	+0.2
1,292,602	-		Ga0059261_1232	0.89	-0.1
1,292,602	-		Ga0059261_1232	0.89	-0.3
1,292,607	+		Ga0059261_1232	0.89	-0.7
1,292,607	+		Ga0059261_1232	0.89	+1.4
1,292,607	+		Ga0059261_1232	0.89	-0.1
1,292,607	+		Ga0059261_1232	0.89	+0.2
1,292,607	+		Ga0059261_1232	0.89	-0.3
1,292,607	+		Ga0059261_1232	0.89	-0.6
1,292,607	+		Ga0059261_1232	0.89	-0.3
1,292,607	+		Ga0059261_1232	0.89	-0.5
1,292,850	+				-0.3
1,292,868	+				-0.1
1,292,899	+				-0.7
1,292,899	+				-0.4
1,292,899	+				-0.1
1,292,945	+				-0.2
1,292,945	+				-0.7
1,292,945	+				-0.1
1,292,945	+				+0.1
1,292,945	+				-0.6
1,292,946	-				-0.0
1,292,946	-				+0.8
1,292,946	-				-0.8
1,292,946	-				+0.3
1,292,946	-				+0.0
1,292,946	-				-0.0
1,292,950	+				-0.8
1,292,950	+				+0.2
1,292,950	+				-0.4
1,292,950	+				-0.6
1,292,951	-				-0.1
1,292,951	-				+0.1
1,292,951	-				-0.1
1,292,951	-				+0.1
1,292,951	-				-0.1
1,292,951	-				-1.1
1,292,965	+				-0.1
1,292,965	+				-0.2
1,292,965	+				+0.6
1,292,966	-				+0.5
1,293,006	-				+0.1
1,293,031	+				+0.6
1,293,032	-				-0.3
1,293,112	+				+0.3
1,293,112	+				-0.9
1,293,113	-				-0.4
1,293,113	-				-0.4
1,293,113	-				-0.1
1,293,113	-				-0.1
1,293,113	-				-0.1
1,293,136	+				+0.7
1,293,137	-				-0.3
1,293,137	-				-0.7
1,293,137	-				+0.6
1,293,137	-				-0.3
1,293,148	+				+0.5
1,293,207	+				+0.5
1,293,207	+				-1.4
1,293,208	-				-0.2
1,293,214	+				+0.2
1,293,214	+				-0.1
1,293,215	-				-0.8
1,293,215	-				-0.9
1,293,218	+				+0.3
1,293,218	+				+0.2
1,293,219	-				+0.0
1,293,219	-				-0.6
1,293,278	+				+0.4
1,293,278	+				-0.8
1,293,279	-				-2.0
1,293,279	-				-0.1
1,293,330	+				+0.2
1,293,349	+				+0.3
1,293,369	+		Ga0059261_1233	0.10	-1.4
1,293,369	+		Ga0059261_1233	0.10	+2.4
1,293,370	-		Ga0059261_1233	0.10	+0.2
1,293,404	+		Ga0059261_1233	0.14	-0.1
1,293,437	+		Ga0059261_1233	0.18	-0.4
1,293,438	-				-0.8
1,293,438	-		Ga0059261_1233	0.18	+0.1
1,293,542	+		Ga0059261_1233	0.29	+0.1
1,293,542	+		Ga0059261_1233	0.29	-0.1
1,293,542	+		Ga0059261_1233	0.29	-0.9
1,293,575	+				-0.8
1,293,575	+		Ga0059261_1233	0.33	-0.1
1,293,575	+		Ga0059261_1233	0.33	-0.6
1,293,575	+		Ga0059261_1233	0.33	-0.1
1,293,575	+		Ga0059261_1233	0.33	-1.4
1,293,576	-		Ga0059261_1233	0.33	-1.4
1,293,576	-		Ga0059261_1233	0.33	+0.6
1,293,576	-		Ga0059261_1233	0.33	-0.4
1,293,576	-		Ga0059261_1233	0.33	-0.0