Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1087

Experiment: Choline Lysine 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline Lysine 5 mM
1,116,278	+		Ga0059261_1086	0.57	-1.3
1,116,278	+		Ga0059261_1086	0.57	-0.8
1,116,278	+		Ga0059261_1086	0.57	+0.5
1,116,278	+		Ga0059261_1086	0.57	-0.3
1,116,278	+		Ga0059261_1086	0.57	+0.3
1,116,278	+		Ga0059261_1086	0.57	+0.1
1,116,279	-		Ga0059261_1086	0.57	-0.1
1,116,279	-		Ga0059261_1086	0.57	+0.2
1,116,279	-		Ga0059261_1086	0.57	+0.3
1,116,279	-		Ga0059261_1086	0.57	+0.2
1,116,279	-		Ga0059261_1086	0.57	-0.3
1,116,279	-		Ga0059261_1086	0.57	-0.4
1,116,413	+		Ga0059261_1086	0.67	+0.1
1,116,413	+		Ga0059261_1086	0.67	+0.7
1,116,413	+		Ga0059261_1086	0.67	+0.6
1,116,563	+		Ga0059261_1086	0.77	+0.7
1,116,564	-		Ga0059261_1086	0.77	-0.5
1,116,573	+		Ga0059261_1086	0.78	-0.0
1,116,574	-		Ga0059261_1086	0.78	-0.1
1,116,574	-		Ga0059261_1086	0.78	+0.3
1,116,575	+				+0.8
1,116,575	+		Ga0059261_1086	0.78	+0.3
1,116,576	-		Ga0059261_1086	0.78	-0.4
1,116,576	-		Ga0059261_1086	0.78	+0.6
1,116,576	-		Ga0059261_1086	0.78	+0.7
1,116,576	-		Ga0059261_1086	0.78	-0.5
1,116,633	+		Ga0059261_1086	0.82	+0.5
1,116,633	+		Ga0059261_1086	0.82	+0.3
1,116,633	+		Ga0059261_1086	0.82	+0.3
1,116,633	+		Ga0059261_1086	0.82	-0.2
1,116,633	+		Ga0059261_1086	0.82	+1.9
1,116,633	+		Ga0059261_1086	0.82	-0.6
1,116,633	+		Ga0059261_1086	0.82	-0.1
1,116,633	+		Ga0059261_1086	0.82	+0.0
1,116,633	+		Ga0059261_1086	0.82	+0.4
1,116,634	-		Ga0059261_1086	0.82	-0.8
1,116,634	-		Ga0059261_1086	0.82	-2.7
1,116,634	-		Ga0059261_1086	0.82	-1.6
1,116,634	-		Ga0059261_1086	0.82	+0.1
1,116,634	-		Ga0059261_1086	0.82	+0.1
1,116,634	-		Ga0059261_1086	0.82	+0.1
1,116,634	-		Ga0059261_1086	0.82	+0.3
1,116,634	-		Ga0059261_1086	0.82	-0.1
1,116,635	+		Ga0059261_1086	0.82	+0.6
1,116,635	+		Ga0059261_1086	0.82	+0.0
1,116,635	+		Ga0059261_1086	0.82	+0.3
1,116,635	+		Ga0059261_1086	0.82	-1.1
1,116,635	+		Ga0059261_1086	0.82	+0.3
1,116,636	-		Ga0059261_1086	0.82	+0.4
1,116,636	-		Ga0059261_1086	0.82	+0.2
1,116,636	-		Ga0059261_1086	0.82	-0.2
1,116,638	+		Ga0059261_1086	0.82	-1.3
1,116,638	+		Ga0059261_1086	0.82	-0.2
1,116,638	+		Ga0059261_1086	0.82	-0.4
1,116,638	+		Ga0059261_1086	0.82	+0.9
1,116,638	+		Ga0059261_1086	0.82	+0.0
1,116,638	+		Ga0059261_1086	0.82	+0.3
1,116,639	-		Ga0059261_1086	0.83	+0.1
1,116,639	-		Ga0059261_1086	0.83	-0.6
1,116,639	-		Ga0059261_1086	0.83	-0.9
1,116,639	-		Ga0059261_1086	0.83	-0.3
1,116,639	-		Ga0059261_1086	0.83	-0.3
1,116,764	+				-1.3
1,116,764	+				-1.0
1,116,764	+				+1.5
1,116,764	+				-1.9
1,116,764	+				-0.4
1,116,764	+				+0.5
1,116,765	-				-0.7
1,116,943	+				+0.5
1,116,943	+				+0.5
1,116,943	+				-0.0
1,116,943	+				+1.4
1,116,943	+				-0.2
1,116,943	+				+2.1
1,116,943	+				-0.7
1,116,943	+				+0.5
1,116,943	+				+0.3
1,116,943	+				+0.6
1,116,943	+				-0.2
1,116,943	+				-0.1
1,116,943	+				-0.2
1,116,944	-				+0.3
1,116,944	-				-0.2
1,116,944	-				+0.6
1,116,944	-				-1.3
1,116,944	-				-0.1
1,116,944	-				+0.0
1,116,944	-				+0.1
1,116,944	-				-0.1
1,116,948	+				-0.3
1,116,948	+				-0.2
1,116,948	+				-0.6
1,116,949	-				-0.6
1,116,986	+				-0.5
1,116,986	+				+2.1
1,116,987	-				-0.1
1,117,062	+				+1.5
1,117,062	+				+0.6
1,117,062	+				-0.2
1,117,062	+				+0.3
1,117,063	-				-0.5
1,117,076	+				+0.3
1,117,076	+				+0.1
1,117,077	-				+0.7
1,117,077	-				-0.1
1,117,077	-				-0.3
1,117,077	-				+0.3
1,117,090	+				+0.4
1,117,090	+				+0.3
1,117,090	+				+0.1
1,117,090	+				-1.4
1,117,090	+				-0.3
1,117,091	-				+0.0
1,117,134	+				+0.5
1,117,134	+				+0.3
1,117,134	+				-0.2
1,117,134	+				+0.0
1,117,134	+				+0.0
1,117,134	+				-0.3
1,117,134	+				+1.1
1,117,135	-				+1.7
1,117,135	-				+0.5
1,117,135	-				-0.8
1,117,135	-				-1.1
1,117,135	-				-0.5
1,117,135	-				+0.1
1,117,135	-				-0.8
1,117,135	-				-0.6
1,117,137	+				-1.7
1,117,137	+				+0.2
1,117,137	+				+0.1
1,117,137	+				-1.2
1,117,137	+				+0.4
1,117,137	+				+1.1
1,117,137	+				-0.8
1,117,137	+				+0.1
1,117,137	+				+0.0
1,117,137	+				+0.3
1,117,137	+				+0.4
1,117,138	-				+0.1
1,117,138	-				-0.9
1,117,138	-				-0.5
1,117,138	-				+0.0
1,117,138	-				+0.3
1,117,138	-				+0.0
1,117,138	-				+0.1
1,117,138	-				-0.5
1,117,138	-				+0.1
1,117,138	-				-0.4
1,117,242	+		Ga0059261_1087	0.15	-0.7
1,117,245	+		Ga0059261_1087	0.16	+0.5
1,117,245	+		Ga0059261_1087	0.16	+0.8
1,117,246	-		Ga0059261_1087	0.17	+1.1
1,117,246	-		Ga0059261_1087	0.17	-0.4
1,117,246	-		Ga0059261_1087	0.17	+0.4
1,117,246	-		Ga0059261_1087	0.17	-0.4
1,117,327	+		Ga0059261_1087	0.44	+0.1
1,117,328	-		Ga0059261_1087	0.44	+0.3
1,117,328	-		Ga0059261_1087	0.44	+1.1
1,117,328	-				+1.7
1,117,481	+				-1.0
1,117,482	-				-0.5
1,117,494	-				+0.3
1,117,494	-				+0.5
1,117,566	+				+0.2
1,117,566	+				+0.4
1,117,567	-				-0.6
1,117,667	-		Ga0059261_1088	0.20	+0.5
1,117,702	+		Ga0059261_1088	0.25	+1.4
1,117,702	+		Ga0059261_1088	0.25	-0.1
1,117,702	+		Ga0059261_1088	0.25	+0.5
1,117,702	+		Ga0059261_1088	0.25	+0.6
1,117,702	+		Ga0059261_1088	0.25	+0.5
1,117,702	+		Ga0059261_1088	0.25	-0.6
1,117,702	+		Ga0059261_1088	0.25	-0.1
1,117,703	-		Ga0059261_1088	0.25	-0.0
1,117,703	-		Ga0059261_1088	0.25	+0.2
1,117,703	-				-0.9
1,117,703	-		Ga0059261_1088	0.25	-1.7
1,117,703	-		Ga0059261_1088	0.25	+0.4
1,117,705	-		Ga0059261_1088	0.26	+0.6
1,117,705	-		Ga0059261_1088	0.26	+0.1
1,117,705	-		Ga0059261_1088	0.26	+0.1
1,117,857	+		Ga0059261_1088	0.49	+0.3
1,117,857	+		Ga0059261_1088	0.49	+1.5
1,117,857	+		Ga0059261_1088	0.49	-0.2
1,117,857	+		Ga0059261_1088	0.49	-0.1
1,117,857	+		Ga0059261_1088	0.49	-1.0
1,117,857	+		Ga0059261_1088	0.49	+0.2
1,117,857	+		Ga0059261_1088	0.49	+0.2
1,117,857	+		Ga0059261_1088	0.49	-0.1
1,117,857	+		Ga0059261_1088	0.49	-0.1
1,117,857	+		Ga0059261_1088	0.49	-0.8
1,117,858	-		Ga0059261_1088	0.49	-1.2
1,117,858	-		Ga0059261_1088	0.49	-0.6
1,117,858	-		Ga0059261_1088	0.49	+0.0
1,117,858	-		Ga0059261_1088	0.49	-0.0
1,117,858	-		Ga0059261_1088	0.49	-0.1
1,117,858	-		Ga0059261_1088	0.49	-0.1
1,117,858	-		Ga0059261_1088	0.49	-0.5
1,117,858	-		Ga0059261_1088	0.49	-1.4
1,117,972	+		Ga0059261_1088	0.66	-0.8
1,117,974	+		Ga0059261_1088	0.67	+0.2
1,118,019	+		Ga0059261_1088	0.73	+0.2
1,118,020	-		Ga0059261_1088	0.73	-0.1
1,118,020	-		Ga0059261_1088	0.73	-0.1
1,118,020	-		Ga0059261_1088	0.73	-0.5
1,118,040	+				+0.1
1,118,041	-		Ga0059261_1088	0.77	-0.4
1,118,041	-		Ga0059261_1088	0.77	+0.5
1,118,113	+		Ga0059261_1088	0.88	+0.7
1,118,113	+		Ga0059261_1088	0.88	+0.3
1,118,113	+		Ga0059261_1088	0.88	-0.7
1,118,113	+		Ga0059261_1088	0.88	+0.1
1,118,113	+		Ga0059261_1088	0.88	+0.0
1,118,113	+		Ga0059261_1088	0.88	-0.3
1,118,113	+		Ga0059261_1088	0.88	+0.6
1,118,113	+		Ga0059261_1088	0.88	-0.0
1,118,113	+		Ga0059261_1088	0.88	+0.4
1,118,113	+		Ga0059261_1088	0.88	+0.6
1,118,114	-		Ga0059261_1088	0.88	-0.5
1,118,114	-		Ga0059261_1088	0.88	+0.0
1,118,114	-		Ga0059261_1088	0.88	+0.1
1,118,114	-		Ga0059261_1088	0.88	-0.1
1,118,114	-		Ga0059261_1088	0.88	-0.9
1,118,114	-		Ga0059261_1088	0.88	+0.8
1,118,114	-		Ga0059261_1088	0.88	+1.3
1,118,114	-		Ga0059261_1088	0.88	+0.3
1,118,114	-		Ga0059261_1088	0.88	+0.3
1,118,114	-		Ga0059261_1088	0.88	-0.6
1,118,114	-		Ga0059261_1088	0.88	+0.1
1,118,114	-		Ga0059261_1088	0.88	-0.7
1,118,114	-		Ga0059261_1088	0.88	+1.1
1,118,114	-				+1.7
1,118,114	-		Ga0059261_1088	0.88	+0.8
1,118,114	-		Ga0059261_1088	0.88	-0.6
1,118,114	-		Ga0059261_1088	0.88	-0.0
1,118,115	+		Ga0059261_1088	0.88	+0.0
1,118,115	+		Ga0059261_1088	0.88	+0.2
1,118,115	+		Ga0059261_1088	0.88	-1.1
1,118,115	+		Ga0059261_1088	0.88	+0.2
1,118,116	-		Ga0059261_1088	0.88	-1.2
1,118,116	-		Ga0059261_1088	0.88	-1.2
1,118,116	-		Ga0059261_1088	0.88	+0.3
1,118,116	-		Ga0059261_1088	0.88	-1.2
1,118,116	-		Ga0059261_1088	0.88	+0.1
1,118,116	-		Ga0059261_1088	0.88	-0.1
1,118,208	+				+0.2
1,118,208	+				-1.3
1,118,208	+				-1.3
1,118,208	+				-0.0
1,118,209	-				+0.1
1,118,209	-				-1.5
1,118,209	-				-0.4
1,118,251	-				-0.3