Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_30165 and AO356_30170 are separated by 459 nucleotides AO356_30170 and AO356_30175 overlap by 4 nucleotides
AO356_30165: AO356_30165 - hypothetical protein, at 7,040,608 to 7,041,681
_30165
AO356_30170: AO356_30170 - cytochrome B, at 7,042,141 to 7,042,719
_30170
AO356_30175: AO356_30175 - caspase, at 7,042,716 to 7,043,798
_30175
Position (kb)
7042
7043 Strain fitness (log2 ratio)
-2
-1
0
1 at 7041.218 kb on + strand, within AO356_30165 at 7041.381 kb on + strand, within AO356_30165 at 7041.381 kb on + strand, within AO356_30165 at 7041.422 kb on + strand, within AO356_30165 at 7041.423 kb on - strand, within AO356_30165 at 7041.579 kb on - strand at 7041.619 kb on + strand at 7041.620 kb on - strand at 7041.620 kb on - strand at 7041.738 kb on + strand at 7041.739 kb on - strand at 7041.779 kb on + strand at 7041.782 kb on - strand at 7041.787 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.821 kb on - strand at 7041.978 kb on + strand at 7041.978 kb on + strand at 7041.979 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.081 kb on - strand at 7042.299 kb on + strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.300 kb on - strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.439 kb on + strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.440 kb on - strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.598 kb on + strand, within AO356_30170 at 7042.599 kb on - strand, within AO356_30170 at 7042.768 kb on + strand at 7042.798 kb on + strand at 7043.127 kb on + strand, within AO356_30175 at 7043.142 kb on - strand, within AO356_30175 at 7043.515 kb on + strand, within AO356_30175 at 7043.516 kb on - strand, within AO356_30175 at 7043.516 kb on - strand, within AO356_30175
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 7,041,218 + AO356_30165 0.57 +0.3 7,041,381 + AO356_30165 0.72 -1.2 7,041,381 + AO356_30165 0.72 +0.4 7,041,422 + AO356_30165 0.76 +1.2 7,041,423 - AO356_30165 0.76 -0.4 7,041,579 - -1.3 7,041,619 + +0.1 7,041,620 - +0.4 7,041,620 - +0.1 7,041,738 + +1.4 7,041,739 - +0.6 7,041,779 + +0.1 7,041,782 - -0.2 7,041,787 - +0.2 7,041,821 - +1.1 7,041,821 - -0.0 7,041,821 - -0.6 7,041,821 - +0.5 7,041,978 + +0.1 7,041,978 + -0.5 7,041,979 - +0.4 7,042,081 - -0.4 7,042,081 - -0.6 7,042,081 - -0.6 7,042,299 + AO356_30170 0.27 +1.4 7,042,300 - AO356_30170 0.27 -1.1 7,042,300 - AO356_30170 0.27 +1.1 7,042,300 - AO356_30170 0.27 -0.1 7,042,300 - AO356_30170 0.27 -0.5 7,042,300 - AO356_30170 0.27 +0.6 7,042,439 + AO356_30170 0.51 -0.5 7,042,439 + AO356_30170 0.51 +0.7 7,042,440 - AO356_30170 0.52 -0.2 7,042,440 - AO356_30170 0.52 +0.5 7,042,598 + AO356_30170 0.79 -1.9 7,042,598 + AO356_30170 0.79 +1.2 7,042,599 - AO356_30170 0.79 -0.5 7,042,768 + -1.1 7,042,798 + +0.8 7,043,127 + AO356_30175 0.38 -0.2 7,043,142 - AO356_30175 0.39 +1.1 7,043,515 + AO356_30175 0.74 +1.3 7,043,516 - AO356_30175 0.74 +0.8 7,043,516 - AO356_30175 0.74 +0.4
Or see this region's nucleotide sequence