Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_27480 and AO356_27485 are separated by 45 nucleotides AO356_27485 and AO356_27490 are separated by 173 nucleotides
AO356_27480: AO356_27480 - hypothetical protein, at 6,263,235 to 6,264,242
_27480
AO356_27485: AO356_27485 - hypothetical protein, at 6,264,288 to 6,265,094
_27485
AO356_27490: AO356_27490 - xylose isomerase, at 6,265,268 to 6,266,077
_27490
Position (kb)
6264
6265
6266 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6263.460 kb on + strand, within AO356_27480 at 6263.460 kb on + strand, within AO356_27480 at 6263.460 kb on + strand, within AO356_27480 at 6263.460 kb on + strand, within AO356_27480 at 6263.460 kb on + strand, within AO356_27480 at 6263.460 kb on + strand, within AO356_27480 at 6263.460 kb on + strand, within AO356_27480 at 6263.461 kb on - strand, within AO356_27480 at 6263.461 kb on - strand, within AO356_27480 at 6263.461 kb on - strand, within AO356_27480 at 6263.461 kb on - strand, within AO356_27480 at 6263.525 kb on + strand, within AO356_27480 at 6263.614 kb on + strand, within AO356_27480 at 6263.615 kb on - strand, within AO356_27480 at 6263.704 kb on - strand, within AO356_27480 at 6263.759 kb on + strand, within AO356_27480 at 6263.759 kb on + strand, within AO356_27480 at 6263.760 kb on - strand, within AO356_27480 at 6263.818 kb on + strand, within AO356_27480 at 6263.819 kb on - strand, within AO356_27480 at 6263.997 kb on + strand, within AO356_27480 at 6263.997 kb on + strand, within AO356_27480 at 6263.998 kb on - strand, within AO356_27480 at 6264.084 kb on + strand, within AO356_27480 at 6264.085 kb on - strand, within AO356_27480 at 6264.088 kb on - strand, within AO356_27480 at 6264.135 kb on + strand, within AO356_27480 at 6264.135 kb on + strand, within AO356_27480 at 6264.135 kb on + strand, within AO356_27480 at 6264.135 kb on + strand, within AO356_27480 at 6264.192 kb on + strand at 6264.407 kb on - strand, within AO356_27485 at 6264.432 kb on + strand, within AO356_27485 at 6264.432 kb on + strand, within AO356_27485 at 6264.433 kb on - strand, within AO356_27485 at 6264.904 kb on + strand, within AO356_27485 at 6265.102 kb on + strand at 6265.103 kb on - strand at 6265.103 kb on - strand at 6265.168 kb on + strand at 6265.168 kb on + strand at 6265.179 kb on + strand at 6265.179 kb on + strand at 6265.228 kb on - strand at 6265.324 kb on - strand at 6265.415 kb on + strand, within AO356_27490 at 6265.416 kb on - strand, within AO356_27490 at 6265.494 kb on + strand, within AO356_27490 at 6265.495 kb on - strand, within AO356_27490 at 6265.530 kb on + strand, within AO356_27490 at 6265.530 kb on + strand, within AO356_27490 at 6265.531 kb on - strand, within AO356_27490 at 6265.552 kb on - strand, within AO356_27490 at 6265.583 kb on - strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.586 kb on + strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.587 kb on - strand, within AO356_27490 at 6265.647 kb on - strand, within AO356_27490 at 6265.653 kb on - strand, within AO356_27490 at 6265.698 kb on + strand, within AO356_27490 at 6265.698 kb on + strand, within AO356_27490 at 6265.698 kb on + strand, within AO356_27490 at 6265.699 kb on - strand, within AO356_27490 at 6265.711 kb on - strand, within AO356_27490 at 6265.905 kb on + strand, within AO356_27490 at 6265.905 kb on + strand, within AO356_27490 at 6266.078 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 6,263,460 + AO356_27480 0.22 +0.1 6,263,460 + AO356_27480 0.22 -0.2 6,263,460 + AO356_27480 0.22 -0.1 6,263,460 + AO356_27480 0.22 +0.3 6,263,460 + AO356_27480 0.22 -0.2 6,263,460 + AO356_27480 0.22 +0.8 6,263,460 + AO356_27480 0.22 +1.3 6,263,461 - AO356_27480 0.22 +2.1 6,263,461 - AO356_27480 0.22 -0.9 6,263,461 - AO356_27480 0.22 -0.5 6,263,461 - AO356_27480 0.22 +0.4 6,263,525 + AO356_27480 0.29 +0.3 6,263,614 + AO356_27480 0.38 -0.8 6,263,615 - AO356_27480 0.38 +0.5 6,263,704 - AO356_27480 0.47 +1.2 6,263,759 + AO356_27480 0.52 +1.3 6,263,759 + AO356_27480 0.52 +0.4 6,263,760 - AO356_27480 0.52 -1.2 6,263,818 + AO356_27480 0.58 +0.4 6,263,819 - AO356_27480 0.58 -0.9 6,263,997 + AO356_27480 0.76 -0.3 6,263,997 + AO356_27480 0.76 +0.7 6,263,998 - AO356_27480 0.76 +1.1 6,264,084 + AO356_27480 0.84 -0.1 6,264,085 - AO356_27480 0.84 +1.1 6,264,088 - AO356_27480 0.85 +3.1 6,264,135 + AO356_27480 0.89 -1.0 6,264,135 + AO356_27480 0.89 -0.9 6,264,135 + AO356_27480 0.89 -1.1 6,264,135 + AO356_27480 0.89 +1.4 6,264,192 + +0.5 6,264,407 - AO356_27485 0.15 +0.5 6,264,432 + AO356_27485 0.18 -2.1 6,264,432 + AO356_27485 0.18 +1.8 6,264,433 - AO356_27485 0.18 +0.3 6,264,904 + AO356_27485 0.76 +0.4 6,265,102 + +1.1 6,265,103 - +0.7 6,265,103 - +0.5 6,265,168 + -0.0 6,265,168 + -0.4 6,265,179 + -0.0 6,265,179 + -1.2 6,265,228 - +0.0 6,265,324 - -0.1 6,265,415 + AO356_27490 0.18 +0.3 6,265,416 - AO356_27490 0.18 +0.4 6,265,494 + AO356_27490 0.28 +0.2 6,265,495 - AO356_27490 0.28 +0.3 6,265,530 + AO356_27490 0.32 +1.5 6,265,530 + AO356_27490 0.32 -0.5 6,265,531 - AO356_27490 0.32 -0.2 6,265,552 - AO356_27490 0.35 +0.6 6,265,583 - AO356_27490 0.39 -0.2 6,265,586 + AO356_27490 0.39 -1.1 6,265,586 + AO356_27490 0.39 +0.6 6,265,586 + AO356_27490 0.39 +0.5 6,265,586 + AO356_27490 0.39 -0.2 6,265,586 + AO356_27490 0.39 -1.6 6,265,586 + AO356_27490 0.39 +0.3 6,265,586 + AO356_27490 0.39 -1.1 6,265,587 - AO356_27490 0.39 +0.3 6,265,587 - AO356_27490 0.39 -0.9 6,265,587 - AO356_27490 0.39 +0.6 6,265,587 - AO356_27490 0.39 -0.1 6,265,587 - AO356_27490 0.39 +0.2 6,265,587 - AO356_27490 0.39 -0.8 6,265,587 - AO356_27490 0.39 +0.1 6,265,647 - AO356_27490 0.47 +0.8 6,265,653 - AO356_27490 0.48 +0.3 6,265,698 + AO356_27490 0.53 -0.1 6,265,698 + AO356_27490 0.53 -0.0 6,265,698 + AO356_27490 0.53 +0.5 6,265,699 - AO356_27490 0.53 -0.5 6,265,711 - AO356_27490 0.55 -0.7 6,265,905 + AO356_27490 0.79 +0.5 6,265,905 + AO356_27490 0.79 -1.1 6,266,078 - +0.5
Or see this region's nucleotide sequence