Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_24630 and AO356_24635 are separated by 191 nucleotides AO356_24635 and AO356_24640 overlap by 44 nucleotides AO356_24640 and AO356_24645 overlap by 4 nucleotides
AO356_24630: AO356_24630 - exonuclease SbcD, at 5,570,731 to 5,571,975
_24630
AO356_24635: AO356_24635 - hypothetical protein, at 5,572,167 to 5,572,364
_24635
AO356_24640: AO356_24640 - protein BatD, at 5,572,321 to 5,573,958
_24640
AO356_24645: AO356_24645 - hypothetical protein, at 5,573,955 to 5,575,691
_24645
Position (kb) 5572
5573
5574 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5571.504 kb on - strand, within AO356_24630 at 5571.785 kb on + strand, within AO356_24630 at 5571.851 kb on - strand at 5571.851 kb on - strand at 5572.083 kb on + strand at 5572.322 kb on + strand at 5572.322 kb on + strand at 5572.323 kb on - strand at 5572.323 kb on - strand at 5572.331 kb on + strand at 5572.728 kb on - strand, within AO356_24640 at 5573.345 kb on + strand, within AO356_24640 at 5573.346 kb on - strand, within AO356_24640 at 5573.346 kb on - strand, within AO356_24640 at 5573.402 kb on + strand, within AO356_24640 at 5573.403 kb on - strand, within AO356_24640 at 5573.492 kb on + strand, within AO356_24640 at 5573.493 kb on - strand, within AO356_24640 at 5573.493 kb on - strand, within AO356_24640 at 5573.493 kb on - strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.528 kb on + strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5573.529 kb on - strand, within AO356_24640 at 5574.005 kb on + strand at 5574.472 kb on + strand, within AO356_24645 at 5574.523 kb on + strand, within AO356_24645 at 5574.523 kb on + strand, within AO356_24645 at 5574.524 kb on - strand, within AO356_24645
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 5,571,504 - AO356_24630 0.62 -0.3 5,571,785 + AO356_24630 0.85 +0.0 5,571,851 - +0.6 5,571,851 - +0.3 5,572,083 + -0.4 5,572,322 + +0.1 5,572,322 + -0.2 5,572,323 - +0.4 5,572,323 - -0.2 5,572,331 + -1.8 5,572,728 - AO356_24640 0.25 -1.5 5,573,345 + AO356_24640 0.63 -0.9 5,573,346 - AO356_24640 0.63 -1.0 5,573,346 - AO356_24640 0.63 -1.1 5,573,402 + AO356_24640 0.66 -0.8 5,573,403 - AO356_24640 0.66 -1.2 5,573,492 + AO356_24640 0.71 -0.9 5,573,493 - AO356_24640 0.72 -3.5 5,573,493 - AO356_24640 0.72 -1.4 5,573,493 - AO356_24640 0.72 -1.1 5,573,528 + AO356_24640 0.74 -2.0 5,573,528 + AO356_24640 0.74 -2.3 5,573,528 + AO356_24640 0.74 -1.6 5,573,528 + AO356_24640 0.74 -0.4 5,573,529 - AO356_24640 0.74 -1.2 5,573,529 - AO356_24640 0.74 -1.0 5,573,529 - AO356_24640 0.74 +0.7 5,573,529 - AO356_24640 0.74 -1.8 5,573,529 - AO356_24640 0.74 -3.1 5,573,529 - AO356_24640 0.74 +1.2 5,574,005 + -1.0 5,574,472 + AO356_24645 0.30 -3.2 5,574,523 + AO356_24645 0.33 -3.5 5,574,523 + AO356_24645 0.33 -1.1 5,574,524 - AO356_24645 0.33 -0.8
Or see this region's nucleotide sequence