Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23885 and AO356_23890 are separated by 59 nucleotides AO356_23890 and AO356_23895 are separated by 257 nucleotides
AO356_23885: AO356_23885 - carbonate dehydratase, at 5,352,877 to 5,355,624
_23885
AO356_23890: AO356_23890 - universal stress protein, at 5,355,684 to 5,356,607
_23890
AO356_23895: AO356_23895 - hypothetical protein, at 5,356,865 to 5,358,115
_23895
Position (kb) 5355
5356
5357 Strain fitness (log2 ratio) -1
0
1
2 at 5354.705 kb on - strand, within AO356_23885 at 5354.761 kb on + strand, within AO356_23885 at 5354.761 kb on + strand, within AO356_23885 at 5354.762 kb on - strand, within AO356_23885 at 5354.778 kb on - strand, within AO356_23885 at 5354.778 kb on - strand, within AO356_23885 at 5354.778 kb on - strand, within AO356_23885 at 5354.799 kb on - strand, within AO356_23885 at 5354.870 kb on - strand, within AO356_23885 at 5355.214 kb on + strand, within AO356_23885 at 5355.214 kb on + strand, within AO356_23885 at 5355.214 kb on + strand, within AO356_23885 at 5355.214 kb on + strand, within AO356_23885 at 5355.287 kb on + strand, within AO356_23885 at 5355.287 kb on + strand, within AO356_23885 at 5355.288 kb on - strand, within AO356_23885 at 5355.383 kb on - strand at 5355.383 kb on - strand at 5355.386 kb on + strand at 5355.386 kb on + strand at 5355.386 kb on + strand at 5355.386 kb on + strand at 5355.387 kb on - strand at 5355.604 kb on + strand at 5355.604 kb on + strand at 5355.604 kb on + strand at 5355.604 kb on + strand at 5355.604 kb on + strand at 5355.605 kb on - strand at 5355.605 kb on - strand at 5355.643 kb on + strand at 5355.643 kb on + strand at 5355.733 kb on + strand at 5355.733 kb on + strand at 5355.781 kb on + strand, within AO356_23890 at 5355.935 kb on - strand, within AO356_23890 at 5355.989 kb on - strand, within AO356_23890 at 5356.018 kb on + strand, within AO356_23890 at 5356.018 kb on + strand, within AO356_23890 at 5356.019 kb on - strand, within AO356_23890 at 5356.024 kb on + strand, within AO356_23890 at 5356.024 kb on + strand, within AO356_23890 at 5356.024 kb on + strand, within AO356_23890 at 5356.024 kb on + strand, within AO356_23890 at 5356.024 kb on + strand, within AO356_23890 at 5356.024 kb on + strand, within AO356_23890 at 5356.025 kb on - strand, within AO356_23890 at 5356.025 kb on - strand, within AO356_23890 at 5356.025 kb on - strand, within AO356_23890 at 5356.025 kb on - strand, within AO356_23890 at 5356.102 kb on + strand, within AO356_23890 at 5356.102 kb on + strand, within AO356_23890 at 5356.102 kb on + strand, within AO356_23890 at 5356.103 kb on - strand, within AO356_23890 at 5356.103 kb on - strand, within AO356_23890 at 5356.103 kb on - strand, within AO356_23890 at 5356.499 kb on + strand, within AO356_23890 at 5356.500 kb on - strand, within AO356_23890 at 5356.602 kb on - strand at 5356.768 kb on - strand at 5357.091 kb on - strand, within AO356_23895 at 5357.091 kb on - strand, within AO356_23895 at 5357.206 kb on - strand, within AO356_23895 at 5357.354 kb on + strand, within AO356_23895
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 5,354,705 - AO356_23885 0.67 -0.2 5,354,761 + AO356_23885 0.69 +0.0 5,354,761 + AO356_23885 0.69 -0.0 5,354,762 - AO356_23885 0.69 +0.6 5,354,778 - AO356_23885 0.69 +0.1 5,354,778 - AO356_23885 0.69 -0.5 5,354,778 - AO356_23885 0.69 +0.8 5,354,799 - AO356_23885 0.70 -1.2 5,354,870 - AO356_23885 0.73 +0.9 5,355,214 + AO356_23885 0.85 +0.5 5,355,214 + AO356_23885 0.85 +0.4 5,355,214 + AO356_23885 0.85 +0.5 5,355,214 + AO356_23885 0.85 +0.5 5,355,287 + AO356_23885 0.88 -0.5 5,355,287 + AO356_23885 0.88 +0.1 5,355,288 - AO356_23885 0.88 +1.0 5,355,383 - -0.4 5,355,383 - +1.2 5,355,386 + -0.9 5,355,386 + -0.4 5,355,386 + +0.3 5,355,386 + -1.1 5,355,387 - +0.3 5,355,604 + -0.5 5,355,604 + -0.2 5,355,604 + +0.3 5,355,604 + -0.2 5,355,604 + -1.1 5,355,605 - -0.6 5,355,605 - -0.8 5,355,643 + +0.2 5,355,643 + +0.5 5,355,733 + +2.4 5,355,733 + -0.1 5,355,781 + AO356_23890 0.10 +0.1 5,355,935 - AO356_23890 0.27 -0.0 5,355,989 - AO356_23890 0.33 +1.0 5,356,018 + AO356_23890 0.36 +0.4 5,356,018 + AO356_23890 0.36 +1.2 5,356,019 - AO356_23890 0.36 +0.5 5,356,024 + AO356_23890 0.37 -1.6 5,356,024 + AO356_23890 0.37 -0.1 5,356,024 + AO356_23890 0.37 -1.2 5,356,024 + AO356_23890 0.37 -0.3 5,356,024 + AO356_23890 0.37 -0.8 5,356,024 + AO356_23890 0.37 -0.7 5,356,025 - AO356_23890 0.37 -0.1 5,356,025 - AO356_23890 0.37 +1.0 5,356,025 - AO356_23890 0.37 +0.1 5,356,025 - AO356_23890 0.37 +0.0 5,356,102 + AO356_23890 0.45 -0.7 5,356,102 + AO356_23890 0.45 -1.2 5,356,102 + AO356_23890 0.45 -0.8 5,356,103 - AO356_23890 0.45 -0.1 5,356,103 - AO356_23890 0.45 -0.0 5,356,103 - AO356_23890 0.45 -0.8 5,356,499 + AO356_23890 0.88 -1.0 5,356,500 - AO356_23890 0.88 +0.3 5,356,602 - +0.1 5,356,768 - +0.5 5,357,091 - AO356_23895 0.18 +0.2 5,357,091 - AO356_23895 0.18 -0.4 5,357,206 - AO356_23895 0.27 +0.8 5,357,354 + AO356_23895 0.39 -0.2
Or see this region's nucleotide sequence