Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13650 and AO356_13655 are separated by 48 nucleotides AO356_13655 and AO356_13660 are separated by 90 nucleotides AO356_13660 and AO356_13665 are separated by 206 nucleotides
AO356_13650: AO356_13650 - cytochrome C, at 3,096,007 to 3,096,456
_13650
AO356_13655: AO356_13655 - hypothetical protein, at 3,096,505 to 3,096,900
_13655
AO356_13660: AO356_13660 - aromatic ring-opening dioxygenase LigA, at 3,096,991 to 3,098,664
_13660
AO356_13665: AO356_13665 - lysine transporter LysE, at 3,098,871 to 3,099,491
_13665
Position (kb)
3096
3097
3098
3099 Strain fitness (log2 ratio)
-2
-1
0
1 at 3096.015 kb on - strand at 3096.373 kb on + strand, within AO356_13650 at 3096.374 kb on - strand, within AO356_13650 at 3096.374 kb on - strand, within AO356_13650 at 3096.374 kb on - strand, within AO356_13650 at 3096.374 kb on - strand, within AO356_13650 at 3096.374 kb on - strand, within AO356_13650 at 3096.385 kb on + strand, within AO356_13650 at 3096.385 kb on + strand, within AO356_13650 at 3096.385 kb on + strand, within AO356_13650 at 3096.385 kb on + strand, within AO356_13650 at 3096.385 kb on + strand, within AO356_13650 at 3096.386 kb on - strand, within AO356_13650 at 3096.435 kb on + strand at 3096.435 kb on + strand at 3096.435 kb on + strand at 3096.435 kb on + strand at 3096.451 kb on + strand at 3096.451 kb on + strand at 3096.452 kb on - strand at 3096.452 kb on - strand at 3096.452 kb on - strand at 3096.452 kb on - strand at 3096.492 kb on - strand at 3096.492 kb on - strand at 3096.492 kb on - strand at 3096.510 kb on + strand at 3096.510 kb on + strand at 3096.510 kb on + strand at 3096.511 kb on - strand at 3096.655 kb on + strand, within AO356_13655 at 3096.655 kb on + strand, within AO356_13655 at 3096.655 kb on + strand, within AO356_13655 at 3096.655 kb on + strand, within AO356_13655 at 3096.655 kb on + strand, within AO356_13655 at 3096.656 kb on - strand, within AO356_13655 at 3096.656 kb on - strand, within AO356_13655 at 3096.656 kb on - strand, within AO356_13655 at 3096.656 kb on - strand, within AO356_13655 at 3096.656 kb on - strand, within AO356_13655 at 3096.865 kb on + strand at 3096.865 kb on + strand at 3096.865 kb on + strand at 3096.866 kb on - strand at 3096.866 kb on - strand at 3096.866 kb on - strand at 3096.866 kb on - strand at 3096.900 kb on + strand at 3096.900 kb on + strand at 3096.932 kb on + strand at 3096.933 kb on - strand at 3096.992 kb on + strand at 3097.018 kb on + strand at 3097.018 kb on + strand at 3097.018 kb on + strand at 3097.018 kb on + strand at 3097.018 kb on + strand at 3097.018 kb on + strand at 3097.018 kb on + strand at 3097.019 kb on - strand at 3097.019 kb on - strand at 3097.019 kb on - strand at 3097.019 kb on - strand at 3097.019 kb on - strand at 3097.019 kb on - strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.021 kb on + strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.022 kb on - strand at 3097.251 kb on + strand, within AO356_13660 at 3097.251 kb on + strand, within AO356_13660 at 3097.279 kb on - strand, within AO356_13660 at 3097.279 kb on - strand, within AO356_13660 at 3097.742 kb on + strand, within AO356_13660 at 3097.742 kb on + strand, within AO356_13660 at 3097.742 kb on + strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.743 kb on - strand, within AO356_13660 at 3097.748 kb on + strand, within AO356_13660 at 3097.748 kb on + strand, within AO356_13660 at 3097.749 kb on - strand, within AO356_13660 at 3097.749 kb on - strand, within AO356_13660 at 3097.749 kb on - strand, within AO356_13660 at 3097.913 kb on + strand, within AO356_13660 at 3097.913 kb on + strand, within AO356_13660 at 3097.914 kb on - strand, within AO356_13660 at 3098.120 kb on + strand, within AO356_13660 at 3098.120 kb on + strand, within AO356_13660 at 3098.120 kb on + strand, within AO356_13660 at 3098.121 kb on - strand, within AO356_13660 at 3098.121 kb on - strand, within AO356_13660 at 3098.121 kb on - strand, within AO356_13660 at 3098.480 kb on + strand, within AO356_13660 at 3098.480 kb on + strand, within AO356_13660 at 3098.480 kb on + strand, within AO356_13660 at 3098.481 kb on - strand, within AO356_13660 at 3098.481 kb on - strand, within AO356_13660 at 3098.481 kb on - strand, within AO356_13660 at 3098.481 kb on - strand, within AO356_13660 at 3098.481 kb on - strand, within AO356_13660 at 3098.481 kb on - strand, within AO356_13660 at 3098.630 kb on - strand at 3098.630 kb on - strand at 3098.648 kb on + strand at 3098.649 kb on - strand at 3098.649 kb on - strand at 3098.649 kb on - strand at 3098.649 kb on - strand at 3098.649 kb on - strand at 3098.688 kb on + strand at 3098.700 kb on - strand at 3099.123 kb on + strand, within AO356_13665 at 3099.123 kb on + strand, within AO356_13665 at 3099.124 kb on - strand, within AO356_13665 at 3099.124 kb on - strand, within AO356_13665 at 3099.124 kb on - strand, within AO356_13665 at 3099.124 kb on - strand, within AO356_13665 at 3099.124 kb on - strand, within AO356_13665 at 3099.139 kb on + strand, within AO356_13665 at 3099.139 kb on + strand, within AO356_13665 at 3099.140 kb on - strand, within AO356_13665 at 3099.140 kb on - strand, within AO356_13665 at 3099.233 kb on + strand, within AO356_13665 at 3099.287 kb on + strand, within AO356_13665 at 3099.287 kb on + strand, within AO356_13665 at 3099.287 kb on + strand, within AO356_13665 at 3099.294 kb on - strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.363 kb on + strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.364 kb on - strand, within AO356_13665 at 3099.369 kb on + strand, within AO356_13665 at 3099.369 kb on + strand, within AO356_13665 at 3099.369 kb on + strand, within AO356_13665 at 3099.369 kb on + strand, within AO356_13665 at 3099.369 kb on + strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.370 kb on - strand, within AO356_13665 at 3099.381 kb on + strand, within AO356_13665 at 3099.382 kb on - strand, within AO356_13665 at 3099.382 kb on - strand, within AO356_13665 at 3099.537 kb on - strand at 3099.601 kb on + strand at 3099.601 kb on + strand at 3099.602 kb on - strand at 3099.602 kb on - strand at 3099.646 kb on + strand at 3099.646 kb on + strand at 3099.646 kb on + strand at 3099.646 kb on + strand at 3099.647 kb on - strand at 3099.647 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 3,096,015 - -0.5 3,096,373 + AO356_13650 0.81 -0.1 3,096,374 - AO356_13650 0.82 -0.4 3,096,374 - AO356_13650 0.82 -0.4 3,096,374 - AO356_13650 0.82 -0.2 3,096,374 - AO356_13650 0.82 +0.3 3,096,374 - AO356_13650 0.82 +0.1 3,096,385 + AO356_13650 0.84 +0.0 3,096,385 + AO356_13650 0.84 -0.6 3,096,385 + AO356_13650 0.84 -1.0 3,096,385 + AO356_13650 0.84 -1.0 3,096,385 + AO356_13650 0.84 -1.7 3,096,386 - AO356_13650 0.84 +0.5 3,096,435 + -0.3 3,096,435 + -2.6 3,096,435 + -0.5 3,096,435 + +0.2 3,096,451 + +0.2 3,096,451 + -0.5 3,096,452 - -0.7 3,096,452 - -1.1 3,096,452 - -1.6 3,096,452 - +1.1 3,096,492 - +0.2 3,096,492 - -0.2 3,096,492 - +0.9 3,096,510 + -0.2 3,096,510 + -1.9 3,096,510 + -0.1 3,096,511 - +0.1 3,096,655 + AO356_13655 0.38 -1.6 3,096,655 + AO356_13655 0.38 +0.2 3,096,655 + AO356_13655 0.38 +0.1 3,096,655 + AO356_13655 0.38 -0.9 3,096,655 + AO356_13655 0.38 +0.6 3,096,656 - AO356_13655 0.38 +0.0 3,096,656 - AO356_13655 0.38 +0.2 3,096,656 - AO356_13655 0.38 +0.1 3,096,656 - AO356_13655 0.38 -1.3 3,096,656 - AO356_13655 0.38 -0.3 3,096,865 + +0.2 3,096,865 + -0.9 3,096,865 + +0.1 3,096,866 - -1.0 3,096,866 - -0.1 3,096,866 - +0.3 3,096,866 - -0.5 3,096,900 + -0.3 3,096,900 + +0.5 3,096,932 + +0.3 3,096,933 - +0.2 3,096,992 + -0.1 3,097,018 + +0.9 3,097,018 + -0.1 3,097,018 + +0.4 3,097,018 + -0.6 3,097,018 + +1.4 3,097,018 + -2.2 3,097,018 + -1.0 3,097,019 - +0.3 3,097,019 - +0.1 3,097,019 - +0.3 3,097,019 - +1.7 3,097,019 - +1.0 3,097,019 - -2.0 3,097,021 + -0.4 3,097,021 + -0.9 3,097,021 + -0.8 3,097,021 + -0.5 3,097,021 + -1.1 3,097,021 + +1.1 3,097,021 + -0.1 3,097,021 + +0.2 3,097,021 + -0.2 3,097,021 + -0.3 3,097,022 - -0.2 3,097,022 - -0.2 3,097,022 - +0.6 3,097,022 - +0.0 3,097,022 - +0.2 3,097,022 - -0.9 3,097,022 - -0.4 3,097,022 - +0.3 3,097,251 + AO356_13660 0.16 +0.7 3,097,251 + AO356_13660 0.16 +0.2 3,097,279 - AO356_13660 0.17 +0.1 3,097,279 - AO356_13660 0.17 +0.3 3,097,742 + AO356_13660 0.45 +0.7 3,097,742 + AO356_13660 0.45 +0.1 3,097,742 + AO356_13660 0.45 -1.4 3,097,743 - AO356_13660 0.45 +0.7 3,097,743 - AO356_13660 0.45 -0.6 3,097,743 - AO356_13660 0.45 +0.7 3,097,743 - AO356_13660 0.45 -0.4 3,097,743 - AO356_13660 0.45 -0.8 3,097,743 - AO356_13660 0.45 +0.9 3,097,743 - AO356_13660 0.45 +0.4 3,097,748 + AO356_13660 0.45 -0.5 3,097,748 + AO356_13660 0.45 +0.4 3,097,749 - AO356_13660 0.45 -0.2 3,097,749 - AO356_13660 0.45 +0.7 3,097,749 - AO356_13660 0.45 +0.8 3,097,913 + AO356_13660 0.55 -0.3 3,097,913 + AO356_13660 0.55 +0.3 3,097,914 - AO356_13660 0.55 +0.5 3,098,120 + AO356_13660 0.67 -0.5 3,098,120 + AO356_13660 0.67 -0.0 3,098,120 + AO356_13660 0.67 +0.2 3,098,121 - AO356_13660 0.68 -0.5 3,098,121 - AO356_13660 0.68 +0.7 3,098,121 - AO356_13660 0.68 +0.1 3,098,480 + AO356_13660 0.89 -0.2 3,098,480 + AO356_13660 0.89 +0.8 3,098,480 + AO356_13660 0.89 -0.8 3,098,481 - AO356_13660 0.89 +0.3 3,098,481 - AO356_13660 0.89 +1.2 3,098,481 - AO356_13660 0.89 +0.7 3,098,481 - AO356_13660 0.89 +0.2 3,098,481 - AO356_13660 0.89 -1.6 3,098,481 - AO356_13660 0.89 +0.9 3,098,630 - +0.4 3,098,630 - +0.7 3,098,648 + -0.7 3,098,649 - +0.1 3,098,649 - -0.0 3,098,649 - -0.6 3,098,649 - +0.2 3,098,649 - -0.5 3,098,688 + +0.3 3,098,700 - +0.8 3,099,123 + AO356_13665 0.41 -0.7 3,099,123 + AO356_13665 0.41 +0.6 3,099,124 - AO356_13665 0.41 +1.3 3,099,124 - AO356_13665 0.41 -0.0 3,099,124 - AO356_13665 0.41 +0.7 3,099,124 - AO356_13665 0.41 -0.6 3,099,124 - AO356_13665 0.41 -1.7 3,099,139 + AO356_13665 0.43 -0.1 3,099,139 + AO356_13665 0.43 +1.2 3,099,140 - AO356_13665 0.43 -1.2 3,099,140 - AO356_13665 0.43 -1.1 3,099,233 + AO356_13665 0.58 +0.5 3,099,287 + AO356_13665 0.67 -0.9 3,099,287 + AO356_13665 0.67 -0.2 3,099,287 + AO356_13665 0.67 +0.7 3,099,294 - AO356_13665 0.68 -0.5 3,099,363 + AO356_13665 0.79 -0.1 3,099,363 + AO356_13665 0.79 +1.5 3,099,363 + AO356_13665 0.79 +1.7 3,099,363 + AO356_13665 0.79 -1.1 3,099,363 + AO356_13665 0.79 +0.9 3,099,363 + AO356_13665 0.79 +0.2 3,099,363 + AO356_13665 0.79 -0.5 3,099,363 + AO356_13665 0.79 -1.1 3,099,363 + AO356_13665 0.79 -1.7 3,099,364 - AO356_13665 0.79 -1.1 3,099,364 - AO356_13665 0.79 -1.1 3,099,364 - AO356_13665 0.79 +0.9 3,099,364 - AO356_13665 0.79 -0.5 3,099,364 - AO356_13665 0.79 -1.0 3,099,364 - AO356_13665 0.79 +0.9 3,099,364 - AO356_13665 0.79 +0.3 3,099,364 - AO356_13665 0.79 -0.0 3,099,369 + AO356_13665 0.80 -2.7 3,099,369 + AO356_13665 0.80 +0.1 3,099,369 + AO356_13665 0.80 -0.4 3,099,369 + AO356_13665 0.80 +1.0 3,099,369 + AO356_13665 0.80 +0.1 3,099,370 - AO356_13665 0.80 +0.9 3,099,370 - AO356_13665 0.80 -0.0 3,099,370 - AO356_13665 0.80 +0.2 3,099,370 - AO356_13665 0.80 +1.0 3,099,370 - AO356_13665 0.80 -0.3 3,099,370 - AO356_13665 0.80 +1.4 3,099,370 - AO356_13665 0.80 +0.6 3,099,381 + AO356_13665 0.82 -0.3 3,099,382 - AO356_13665 0.82 -0.3 3,099,382 - AO356_13665 0.82 +0.4 3,099,537 - -0.7 3,099,601 + +1.0 3,099,601 + -0.3 3,099,602 - -0.2 3,099,602 - -0.9 3,099,646 + -1.9 3,099,646 + +0.1 3,099,646 + +0.5 3,099,646 + +0.7 3,099,647 - +0.5 3,099,647 - -0.2
Or see this region's nucleotide sequence