Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_11730 and AO356_11735 are separated by 206 nucleotides AO356_11735 and AO356_11740 are separated by 1 nucleotides AO356_11740 and AO356_11745 are separated by 327 nucleotides AO356_11745 and AO356_11750 overlap by 8 nucleotides
AO356_11730: AO356_11730 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase, at 2,656,114 to 2,657,481
_11730
AO356_11735: AO356_11735 - XRE family transcriptional regulator, at 2,657,688 to 2,658,464
_11735
AO356_11740: AO356_11740 - glucosamine--fructose-6-phosphate aminotransferase, at 2,658,466 to 2,660,298
_11740
AO356_11745: AO356_11745 - hypothetical protein, at 2,660,626 to 2,661,084
_11745
AO356_11750: AO356_11750 - toxin HipA, at 2,661,077 to 2,662,333
_11750
Position (kb)
2658
2659
2660
2661 Strain fitness (log2 ratio)
-2
-1
0
1 at 2657.479 kb on + strand at 2657.479 kb on + strand at 2657.528 kb on + strand at 2657.528 kb on + strand at 2657.528 kb on + strand at 2657.529 kb on - strand at 2657.529 kb on - strand at 2657.529 kb on - strand at 2657.529 kb on - strand at 2657.535 kb on + strand at 2657.535 kb on + strand at 2657.535 kb on + strand at 2657.536 kb on - strand at 2657.544 kb on - strand at 2657.544 kb on - strand at 2657.544 kb on - strand at 2657.702 kb on + strand at 2657.702 kb on + strand at 2657.798 kb on + strand, within AO356_11735 at 2657.916 kb on + strand, within AO356_11735 at 2657.916 kb on + strand, within AO356_11735 at 2658.230 kb on + strand, within AO356_11735 at 2658.394 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.333 kb on + strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.334 kb on - strand at 2660.337 kb on + strand at 2660.337 kb on + strand at 2660.337 kb on + strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.338 kb on - strand at 2660.356 kb on + strand at 2660.357 kb on - strand at 2660.366 kb on - strand at 2660.399 kb on + strand at 2660.400 kb on - strand at 2660.416 kb on + strand at 2660.416 kb on + strand at 2660.416 kb on + strand at 2660.417 kb on - strand at 2660.417 kb on - strand at 2660.417 kb on - strand at 2660.813 kb on - strand, within AO356_11745 at 2660.813 kb on - strand, within AO356_11745 at 2661.065 kb on + strand at 2661.065 kb on + strand at 2661.098 kb on + strand at 2661.172 kb on + strand at 2661.173 kb on - strand at 2661.173 kb on - strand at 2661.248 kb on + strand, within AO356_11750 at 2661.249 kb on - strand, within AO356_11750 at 2661.292 kb on - strand, within AO356_11750
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,657,479 + +0.8 2,657,479 + +0.5 2,657,528 + -0.2 2,657,528 + +0.5 2,657,528 + -0.3 2,657,529 - -0.0 2,657,529 - -0.1 2,657,529 - -0.1 2,657,529 - -0.3 2,657,535 + -0.7 2,657,535 + -0.8 2,657,535 + -0.3 2,657,536 - -0.1 2,657,544 - +0.3 2,657,544 - +0.1 2,657,544 - +0.6 2,657,702 + +0.7 2,657,702 + +0.2 2,657,798 + AO356_11735 0.14 +0.2 2,657,916 + AO356_11735 0.29 +0.8 2,657,916 + AO356_11735 0.29 +0.6 2,658,230 + AO356_11735 0.70 -2.0 2,658,394 + -0.5 2,660,333 + +0.4 2,660,333 + +0.2 2,660,333 + +0.0 2,660,333 + +0.9 2,660,333 + -1.0 2,660,333 + +1.5 2,660,333 + +0.3 2,660,333 + -0.3 2,660,334 - +0.6 2,660,334 - -0.2 2,660,334 - +0.2 2,660,334 - -0.3 2,660,334 - -0.3 2,660,334 - +1.7 2,660,334 - +0.1 2,660,334 - +0.4 2,660,334 - -0.7 2,660,334 - +0.8 2,660,334 - -0.1 2,660,334 - +0.3 2,660,334 - +1.1 2,660,337 + +0.5 2,660,337 + -0.9 2,660,337 + -0.6 2,660,338 - +0.5 2,660,338 - -0.4 2,660,338 - +0.5 2,660,338 - +0.5 2,660,356 + +1.5 2,660,357 - -0.0 2,660,366 - +0.0 2,660,399 + -0.9 2,660,400 - +0.3 2,660,416 + +0.8 2,660,416 + +1.5 2,660,416 + +0.6 2,660,417 - -0.4 2,660,417 - -0.3 2,660,417 - -0.3 2,660,813 - AO356_11745 0.41 -0.6 2,660,813 - AO356_11745 0.41 -0.3 2,661,065 + +0.1 2,661,065 + -0.5 2,661,098 + +1.2 2,661,172 + -0.2 2,661,173 - +1.0 2,661,173 - +0.3 2,661,248 + AO356_11750 0.14 +1.1 2,661,249 - AO356_11750 0.14 -0.2 2,661,292 - AO356_11750 0.17 +0.2
Or see this region's nucleotide sequence