Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09730 and AO356_09735 are separated by 85 nucleotides AO356_09735 and AO356_09740 overlap by 4 nucleotides AO356_09740 and AO356_09745 are separated by 577 nucleotides
AO356_09730: AO356_09730 - nitrogen regulation protein NR(I), at 2,208,422 to 2,209,858
_09730
AO356_09735: AO356_09735 - transposase, at 2,209,944 to 2,210,780
_09735
AO356_09740: AO356_09740 - transposase, at 2,210,777 to 2,211,079
_09740
AO356_09745: AO356_09745 - hypothetical protein, at 2,211,657 to 2,212,019
_09745
Position (kb)
2209
2210
2211 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2209.225 kb on + strand, within AO356_09730 at 2209.225 kb on + strand, within AO356_09730 at 2209.226 kb on - strand, within AO356_09730 at 2209.226 kb on - strand, within AO356_09730 at 2209.226 kb on - strand, within AO356_09730 at 2209.345 kb on + strand, within AO356_09730 at 2209.345 kb on + strand, within AO356_09730 at 2209.463 kb on + strand, within AO356_09730 at 2209.463 kb on + strand, within AO356_09730 at 2209.464 kb on - strand, within AO356_09730 at 2209.783 kb on + strand at 2209.783 kb on + strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.784 kb on - strand at 2209.867 kb on + strand at 2209.921 kb on - strand at 2211.140 kb on + strand at 2211.140 kb on + strand at 2211.266 kb on + strand at 2211.267 kb on - strand at 2211.399 kb on + strand at 2211.451 kb on + strand at 2211.452 kb on - strand at 2211.452 kb on - strand at 2211.452 kb on - strand at 2211.456 kb on - strand at 2211.456 kb on - strand at 2211.485 kb on + strand at 2211.485 kb on + strand at 2211.486 kb on - strand at 2211.512 kb on + strand at 2211.512 kb on + strand at 2211.512 kb on + strand at 2211.513 kb on - strand at 2211.552 kb on + strand at 2211.553 kb on - strand at 2211.579 kb on + strand at 2211.579 kb on + strand at 2211.579 kb on + strand at 2211.600 kb on - strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.658 kb on + strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand at 2211.659 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 2,209,225 + AO356_09730 0.56 +0.1 2,209,225 + AO356_09730 0.56 -0.5 2,209,226 - AO356_09730 0.56 +0.4 2,209,226 - AO356_09730 0.56 +0.3 2,209,226 - AO356_09730 0.56 -0.8 2,209,345 + AO356_09730 0.64 +0.0 2,209,345 + AO356_09730 0.64 +0.3 2,209,463 + AO356_09730 0.72 +0.3 2,209,463 + AO356_09730 0.72 -0.6 2,209,464 - AO356_09730 0.73 -0.3 2,209,783 + +0.0 2,209,783 + -0.5 2,209,784 - -0.3 2,209,784 - +0.2 2,209,784 - +0.3 2,209,784 - -1.1 2,209,784 - +0.3 2,209,867 + -0.3 2,209,921 - -1.3 2,211,140 + -0.3 2,211,140 + +0.0 2,211,266 + -0.4 2,211,267 - -0.2 2,211,399 + -2.8 2,211,451 + -0.2 2,211,452 - +0.4 2,211,452 - -0.1 2,211,452 - -0.5 2,211,456 - +1.5 2,211,456 - -0.5 2,211,485 + -0.3 2,211,485 + -1.5 2,211,486 - +0.1 2,211,512 + +0.1 2,211,512 + -1.1 2,211,512 + -2.1 2,211,513 - +0.3 2,211,552 + -0.6 2,211,553 - -0.2 2,211,579 + +0.3 2,211,579 + -0.1 2,211,579 + -0.4 2,211,600 - +0.2 2,211,658 + +0.9 2,211,658 + +0.1 2,211,658 + -0.0 2,211,658 + +1.2 2,211,658 + -0.9 2,211,658 + -0.1 2,211,659 - +0.6 2,211,659 - +0.0 2,211,659 - -0.1 2,211,659 - +0.3 2,211,659 - -0.5 2,211,659 - +0.8 2,211,659 - -2.0
Or see this region's nucleotide sequence