Experiment: Cobalt chloride 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06855 and AO356_06860 are separated by 10 nucleotides AO356_06860 and AO356_06865 overlap by 1 nucleotides AO356_06865 and AO356_06870 are separated by 34 nucleotides
AO356_06855: AO356_06855 - peptide ABC transporter ATP-binding protein, at 1,512,684 to 1,513,523
_06855
AO356_06860: AO356_06860 - D-ala-D-ala transporter subunit, at 1,513,534 to 1,514,442
_06860
AO356_06865: AO356_06865 - ABC transporter permease, at 1,514,442 to 1,515,479
_06865
AO356_06870: AO356_06870 - ABC transporter substrate-binding protein, at 1,515,514 to 1,517,136
_06870
Position (kb)
1514
1515
1516 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1513.512 kb on + strand at 1513.513 kb on - strand at 1513.655 kb on + strand, within AO356_06860 at 1513.655 kb on + strand, within AO356_06860 at 1513.655 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.129 kb on + strand, within AO356_06860 at 1514.130 kb on - strand, within AO356_06860 at 1514.150 kb on + strand, within AO356_06860 at 1514.150 kb on + strand, within AO356_06860 at 1514.151 kb on - strand, within AO356_06860 at 1514.151 kb on - strand, within AO356_06860 at 1514.180 kb on + strand, within AO356_06860 at 1514.180 kb on + strand, within AO356_06860 at 1514.471 kb on - strand at 1514.471 kb on - strand at 1514.471 kb on - strand at 1514.576 kb on - strand, within AO356_06865 at 1514.642 kb on - strand, within AO356_06865 at 1514.746 kb on + strand, within AO356_06865 at 1514.746 kb on + strand, within AO356_06865 at 1514.747 kb on - strand, within AO356_06865 at 1514.797 kb on + strand, within AO356_06865 at 1514.798 kb on - strand, within AO356_06865 at 1514.933 kb on - strand, within AO356_06865 at 1514.980 kb on + strand, within AO356_06865 at 1514.980 kb on + strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1514.981 kb on - strand, within AO356_06865 at 1515.245 kb on - strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.292 kb on + strand, within AO356_06865 at 1515.305 kb on - strand, within AO356_06865 at 1515.527 kb on + strand at 1515.569 kb on + strand at 1515.570 kb on - strand at 1515.570 kb on - strand at 1515.648 kb on - strand at 1515.648 kb on - strand at 1515.648 kb on - strand at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.803 kb on + strand, within AO356_06870 at 1515.804 kb on - strand, within AO356_06870 at 1515.804 kb on - strand, within AO356_06870 at 1515.804 kb on - strand, within AO356_06870 at 1515.899 kb on + strand, within AO356_06870 at 1515.899 kb on + strand, within AO356_06870 at 1515.899 kb on + strand, within AO356_06870 at 1515.900 kb on - strand, within AO356_06870 at 1516.145 kb on + strand, within AO356_06870 at 1516.207 kb on + strand, within AO356_06870 at 1516.253 kb on + strand, within AO356_06870 at 1516.254 kb on - strand, within AO356_06870 at 1516.254 kb on - strand, within AO356_06870 at 1516.254 kb on - strand, within AO356_06870 at 1516.256 kb on + strand, within AO356_06870 at 1516.257 kb on - strand, within AO356_06870 at 1516.439 kb on + strand, within AO356_06870 at 1516.439 kb on + strand, within AO356_06870
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.08 mM remove 1,513,512 + +0.4 1,513,513 - +0.5 1,513,655 + AO356_06860 0.13 +0.5 1,513,655 + AO356_06860 0.13 +0.5 1,513,655 + AO356_06860 0.13 +0.2 1,514,129 + AO356_06860 0.65 +0.2 1,514,129 + AO356_06860 0.65 +1.1 1,514,129 + AO356_06860 0.65 +0.7 1,514,129 + AO356_06860 0.65 -0.5 1,514,129 + AO356_06860 0.65 -0.2 1,514,130 - AO356_06860 0.66 -0.3 1,514,150 + AO356_06860 0.68 +0.3 1,514,150 + AO356_06860 0.68 -0.3 1,514,151 - AO356_06860 0.68 +0.3 1,514,151 - AO356_06860 0.68 +0.2 1,514,180 + AO356_06860 0.71 +0.6 1,514,180 + AO356_06860 0.71 +0.1 1,514,471 - +0.0 1,514,471 - +0.4 1,514,471 - -0.7 1,514,576 - AO356_06865 0.13 -0.4 1,514,642 - AO356_06865 0.19 -0.4 1,514,746 + AO356_06865 0.29 -0.0 1,514,746 + AO356_06865 0.29 -0.3 1,514,747 - AO356_06865 0.29 +0.9 1,514,797 + AO356_06865 0.34 +0.3 1,514,798 - AO356_06865 0.34 -0.0 1,514,933 - AO356_06865 0.47 +0.5 1,514,980 + AO356_06865 0.52 -0.2 1,514,980 + AO356_06865 0.52 +0.4 1,514,981 - AO356_06865 0.52 -0.9 1,514,981 - AO356_06865 0.52 +0.0 1,514,981 - AO356_06865 0.52 -0.3 1,514,981 - AO356_06865 0.52 -1.4 1,515,245 - AO356_06865 0.77 +0.4 1,515,292 + AO356_06865 0.82 +1.9 1,515,292 + AO356_06865 0.82 +0.3 1,515,292 + AO356_06865 0.82 +0.5 1,515,292 + AO356_06865 0.82 -0.2 1,515,305 - AO356_06865 0.83 -0.8 1,515,527 + -0.0 1,515,569 + +1.1 1,515,570 - -1.9 1,515,570 - +0.2 1,515,648 - -1.6 1,515,648 - +0.1 1,515,648 - +0.3 1,515,803 + AO356_06870 0.18 +0.6 1,515,803 + AO356_06870 0.18 +0.5 1,515,803 + AO356_06870 0.18 +0.9 1,515,803 + AO356_06870 0.18 -0.2 1,515,803 + AO356_06870 0.18 -0.9 1,515,804 - AO356_06870 0.18 -0.5 1,515,804 - AO356_06870 0.18 -0.8 1,515,804 - AO356_06870 0.18 -0.7 1,515,899 + AO356_06870 0.24 +0.1 1,515,899 + AO356_06870 0.24 +0.6 1,515,899 + AO356_06870 0.24 +0.3 1,515,900 - AO356_06870 0.24 +0.3 1,516,145 + AO356_06870 0.39 -0.0 1,516,207 + AO356_06870 0.43 -0.2 1,516,253 + AO356_06870 0.46 -1.1 1,516,254 - AO356_06870 0.46 -1.4 1,516,254 - AO356_06870 0.46 -1.9 1,516,254 - AO356_06870 0.46 +0.1 1,516,256 + AO356_06870 0.46 -0.0 1,516,257 - AO356_06870 0.46 -0.0 1,516,439 + AO356_06870 0.57 +0.3 1,516,439 + AO356_06870 0.57 -0.6
Or see this region's nucleotide sequence