Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03822

Experiment: 2-Deoxy-D-Ribose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03821 and H281DRAFT_03822 are separated by 94 nucleotidesH281DRAFT_03822 and H281DRAFT_03823 are separated by 110 nucleotides H281DRAFT_03821: H281DRAFT_03821 - serine/threonine protein kinase, at 346,420 to 347,799 _03821 H281DRAFT_03822: H281DRAFT_03822 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 347,894 to 348,856 _03822 H281DRAFT_03823: H281DRAFT_03823 - methyl-accepting chemotaxis protein-1, serine sensor receptor, at 348,967 to 350,721 _03823 Position (kb) 347 348 349Strain fitness (log2 ratio) -1 0 1at 347.050 kb on - strand, within H281DRAFT_03821at 347.050 kb on - strand, within H281DRAFT_03821at 347.139 kb on - strand, within H281DRAFT_03821at 347.389 kb on + strand, within H281DRAFT_03821at 347.431 kb on - strand, within H281DRAFT_03821at 347.674 kb on - strandat 348.362 kb on + strand, within H281DRAFT_03822at 348.662 kb on + strand, within H281DRAFT_03822at 348.817 kb on - strandat 348.976 kb on - strandat 348.976 kb on - strandat 349.125 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C)
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347,050 - H281DRAFT_03821 0.46 +0.2
347,050 - H281DRAFT_03821 0.46 +0.1
347,139 - H281DRAFT_03821 0.52 +1.1
347,389 + H281DRAFT_03821 0.70 +0.1
347,431 - H281DRAFT_03821 0.73 -0.2
347,674 - -0.4
348,362 + H281DRAFT_03822 0.49 -0.1
348,662 + H281DRAFT_03822 0.80 +0.3
348,817 - +0.1
348,976 - +0.5
348,976 - -0.1
349,125 - +1.0

Or see this region's nucleotide sequence