Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01585

Experiment: 2-Deoxy-D-Ribose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01584 and H281DRAFT_01585 are separated by 41 nucleotidesH281DRAFT_01585 and H281DRAFT_01586 overlap by 4 nucleotidesH281DRAFT_01586 and H281DRAFT_01587 overlap by 4 nucleotides H281DRAFT_01584: H281DRAFT_01584 - enamidase, at 462,400 to 463,599 _01584 H281DRAFT_01585: H281DRAFT_01585 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 463,641 to 464,354 _01585 H281DRAFT_01586: H281DRAFT_01586 - amino acid/amide ABC transporter ATP-binding protein 1, HAAT family, at 464,351 to 465,160 _01586 H281DRAFT_01587: H281DRAFT_01587 - amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family, at 465,157 to 467,097 _01587 Position (kb) 463 464 465Strain fitness (log2 ratio) -2 -1 0 1at 462.885 kb on + strand, within H281DRAFT_01584at 463.654 kb on + strandat 463.654 kb on + strandat 464.311 kb on + strandat 464.312 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C)
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462,885 + H281DRAFT_01584 0.40 -0.5
463,654 + +0.3
463,654 + -2.5
464,311 + +0.3
464,312 - -1.0

Or see this region's nucleotide sequence