Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01376 and H281DRAFT_01377 are separated by 331 nucleotides H281DRAFT_01377 and H281DRAFT_01378 are separated by 62 nucleotides H281DRAFT_01378 and H281DRAFT_01379 are separated by 77 nucleotides H281DRAFT_01379 and H281DRAFT_01380 are separated by 4 nucleotides H281DRAFT_01380 and H281DRAFT_01381 are separated by 437 nucleotides
H281DRAFT_01376: H281DRAFT_01376 - 4-oxalomesaconate tautomerase, at 221,097 to 222,203
_01376
H281DRAFT_01377: H281DRAFT_01377 - hypothetical protein, at 222,535 to 222,825
_01377
H281DRAFT_01378: H281DRAFT_01378 - hypothetical protein, at 222,888 to 223,031
_01378
H281DRAFT_01379: H281DRAFT_01379 - diguanylate cyclase/phosphodiesterase, at 223,109 to 225,451
_01379
H281DRAFT_01380: H281DRAFT_01380 - hypothetical protein, at 225,456 to 225,605
_01380
H281DRAFT_01381: H281DRAFT_01381 - Cellulose synthase subunit D, at 226,043 to 226,498
_01381
Position (kb) 223
224
225
226 Strain fitness (log2 ratio) -1
0
1
2 at 222.268 kb on - strand at 222.466 kb on + strand at 222.692 kb on - strand, within H281DRAFT_01377 at 222.837 kb on + strand at 222.838 kb on - strand at 223.288 kb on - strand at 223.291 kb on - strand at 223.421 kb on + strand, within H281DRAFT_01379 at 223.595 kb on + strand, within H281DRAFT_01379 at 223.595 kb on + strand, within H281DRAFT_01379 at 223.596 kb on - strand, within H281DRAFT_01379 at 223.596 kb on - strand, within H281DRAFT_01379 at 223.647 kb on + strand, within H281DRAFT_01379 at 223.647 kb on + strand, within H281DRAFT_01379 at 223.647 kb on + strand, within H281DRAFT_01379 at 223.648 kb on - strand, within H281DRAFT_01379 at 223.911 kb on + strand, within H281DRAFT_01379 at 224.289 kb on + strand, within H281DRAFT_01379 at 224.292 kb on + strand, within H281DRAFT_01379 at 224.292 kb on + strand, within H281DRAFT_01379 at 224.292 kb on + strand, within H281DRAFT_01379 at 224.604 kb on - strand at 224.924 kb on + strand, within H281DRAFT_01379 at 225.027 kb on + strand, within H281DRAFT_01379 at 225.028 kb on - strand, within H281DRAFT_01379 at 225.451 kb on + strand at 225.452 kb on - strand at 225.484 kb on + strand, within H281DRAFT_01380 at 225.492 kb on + strand, within H281DRAFT_01380 at 225.493 kb on - strand, within H281DRAFT_01380 at 225.493 kb on - strand, within H281DRAFT_01380 at 225.493 kb on - strand, within H281DRAFT_01380 at 225.493 kb on - strand, within H281DRAFT_01380 at 225.494 kb on + strand, within H281DRAFT_01380 at 225.544 kb on + strand, within H281DRAFT_01380 at 225.634 kb on + strand at 225.635 kb on - strand at 225.667 kb on + strand at 225.667 kb on + strand at 225.668 kb on - strand at 225.746 kb on + strand at 225.747 kb on - strand at 225.747 kb on - strand at 225.747 kb on - strand at 225.807 kb on + strand at 225.808 kb on - strand at 225.808 kb on - strand at 225.837 kb on + strand at 225.875 kb on + strand at 225.891 kb on - strand at 225.891 kb on - strand at 226.061 kb on + strand at 226.274 kb on + strand, within H281DRAFT_01381 at 226.275 kb on - strand, within H281DRAFT_01381 at 226.449 kb on - strand, within H281DRAFT_01381
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 222,268 - +1.5 222,466 + +0.0 222,692 - H281DRAFT_01377 0.54 +0.2 222,837 + +0.4 222,838 - +0.3 223,288 - -0.2 223,291 - +2.5 223,421 + H281DRAFT_01379 0.13 -0.1 223,595 + H281DRAFT_01379 0.21 +1.1 223,595 + H281DRAFT_01379 0.21 +0.1 223,596 - H281DRAFT_01379 0.21 +0.1 223,596 - H281DRAFT_01379 0.21 -0.2 223,647 + H281DRAFT_01379 0.23 +0.2 223,647 + H281DRAFT_01379 0.23 +0.1 223,647 + H281DRAFT_01379 0.23 -0.2 223,648 - H281DRAFT_01379 0.23 +0.1 223,911 + H281DRAFT_01379 0.34 +1.0 224,289 + H281DRAFT_01379 0.50 +0.8 224,292 + H281DRAFT_01379 0.50 -0.1 224,292 + H281DRAFT_01379 0.50 +0.3 224,292 + H281DRAFT_01379 0.50 +0.8 224,604 - +1.4 224,924 + H281DRAFT_01379 0.77 -0.3 225,027 + H281DRAFT_01379 0.82 -0.4 225,028 - H281DRAFT_01379 0.82 -0.3 225,451 + +0.2 225,452 - +0.4 225,484 + H281DRAFT_01380 0.19 +0.3 225,492 + H281DRAFT_01380 0.24 -0.2 225,493 - H281DRAFT_01380 0.25 -0.3 225,493 - H281DRAFT_01380 0.25 -0.1 225,493 - H281DRAFT_01380 0.25 -0.0 225,493 - H281DRAFT_01380 0.25 -1.0 225,494 + H281DRAFT_01380 0.25 -0.2 225,544 + H281DRAFT_01380 0.59 +0.4 225,634 + -0.3 225,635 - +1.7 225,667 + +0.3 225,667 + +0.5 225,668 - -0.1 225,746 + +0.0 225,747 - -0.2 225,747 - +0.6 225,747 - -0.2 225,807 + +0.8 225,808 - -0.2 225,808 - +0.6 225,837 + +0.1 225,875 + -0.6 225,891 - +0.5 225,891 - -0.4 226,061 + +0.4 226,274 + H281DRAFT_01381 0.51 -0.1 226,275 - H281DRAFT_01381 0.51 -0.9 226,449 - H281DRAFT_01381 0.89 +0.0
Or see this region's nucleotide sequence