Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01193 and H281DRAFT_01194 are separated by 286 nucleotides H281DRAFT_01194 and H281DRAFT_01195 are separated by 310 nucleotides
H281DRAFT_01193: H281DRAFT_01193 - 4-hydroxyproline epimerase, at 29,397 to 30,368
_01193
H281DRAFT_01194: H281DRAFT_01194 - amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-), at 30,655 to 31,806
_01194
H281DRAFT_01195: H281DRAFT_01195 - 4-hydroxy-tetrahydrodipicolinate synthase, at 32,117 to 33,061
_01195
Position (kb)
30
31
32 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 30.042 kb on + strand, within H281DRAFT_01193 at 30.043 kb on - strand, within H281DRAFT_01193 at 30.161 kb on + strand, within H281DRAFT_01193 at 30.380 kb on + strand at 30.707 kb on + strand at 30.707 kb on + strand at 30.708 kb on - strand at 30.708 kb on - strand at 30.765 kb on + strand at 30.875 kb on + strand, within H281DRAFT_01194 at 30.917 kb on + strand, within H281DRAFT_01194 at 31.119 kb on - strand at 31.119 kb on - strand, within H281DRAFT_01194 at 31.194 kb on - strand, within H281DRAFT_01194 at 31.194 kb on - strand, within H281DRAFT_01194 at 31.398 kb on - strand, within H281DRAFT_01194 at 31.445 kb on + strand, within H281DRAFT_01194 at 31.915 kb on + strand at 31.917 kb on + strand at 31.917 kb on + strand at 31.917 kb on + strand at 31.917 kb on + strand at 31.918 kb on - strand at 31.918 kb on - strand at 31.978 kb on + strand at 32.149 kb on - strand at 32.170 kb on - strand at 32.170 kb on - strand at 32.271 kb on + strand, within H281DRAFT_01195 at 32.271 kb on + strand, within H281DRAFT_01195 at 32.434 kb on + strand, within H281DRAFT_01195 at 32.437 kb on + strand, within H281DRAFT_01195 at 32.438 kb on - strand, within H281DRAFT_01195 at 32.541 kb on + strand, within H281DRAFT_01195 at 32.541 kb on + strand, within H281DRAFT_01195 at 32.643 kb on + strand, within H281DRAFT_01195 at 32.655 kb on + strand, within H281DRAFT_01195 at 32.655 kb on + strand, within H281DRAFT_01195 at 32.655 kb on + strand, within H281DRAFT_01195 at 32.655 kb on + strand, within H281DRAFT_01195 at 32.656 kb on - strand, within H281DRAFT_01195 at 32.656 kb on - strand, within H281DRAFT_01195
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 30,042 + H281DRAFT_01193 0.66 +0.2 30,043 - H281DRAFT_01193 0.66 +1.5 30,161 + H281DRAFT_01193 0.79 +0.7 30,380 + +0.2 30,707 + +0.0 30,707 + -1.3 30,708 - -0.5 30,708 - -1.0 30,765 + +0.1 30,875 + H281DRAFT_01194 0.19 +0.2 30,917 + H281DRAFT_01194 0.23 -0.4 31,119 - -0.7 31,119 - H281DRAFT_01194 0.40 -0.3 31,194 - H281DRAFT_01194 0.47 +0.2 31,194 - H281DRAFT_01194 0.47 -0.5 31,398 - H281DRAFT_01194 0.64 -0.5 31,445 + H281DRAFT_01194 0.69 -0.3 31,915 + +0.4 31,917 + +0.1 31,917 + -0.4 31,917 + -0.4 31,917 + -0.3 31,918 - +0.2 31,918 - -0.9 31,978 + +2.2 32,149 - +1.2 32,170 - +0.1 32,170 - -0.2 32,271 + H281DRAFT_01195 0.16 +0.2 32,271 + H281DRAFT_01195 0.16 -2.1 32,434 + H281DRAFT_01195 0.34 -0.1 32,437 + H281DRAFT_01195 0.34 +1.2 32,438 - H281DRAFT_01195 0.34 +0.4 32,541 + H281DRAFT_01195 0.45 -0.0 32,541 + H281DRAFT_01195 0.45 +0.1 32,643 + H281DRAFT_01195 0.56 -1.9 32,655 + H281DRAFT_01195 0.57 -0.4 32,655 + H281DRAFT_01195 0.57 +0.2 32,655 + H281DRAFT_01195 0.57 +0.3 32,655 + H281DRAFT_01195 0.57 -1.8 32,656 - H281DRAFT_01195 0.57 +0.1 32,656 - H281DRAFT_01195 0.57 +1.5
Or see this region's nucleotide sequence