Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00930 and H281DRAFT_00931 are separated by 70 nucleotides H281DRAFT_00931 and H281DRAFT_00932 are separated by 46 nucleotides H281DRAFT_00932 and H281DRAFT_00933 are separated by 176 nucleotides H281DRAFT_00933 and H281DRAFT_00934 are separated by 262 nucleotides
H281DRAFT_00930: H281DRAFT_00930 - phosphinothricin acetyltransferase, at 1,033,941 to 1,034,465
_00930
H281DRAFT_00931: H281DRAFT_00931 - TatD DNase family protein, at 1,034,536 to 1,035,330
_00931
H281DRAFT_00932: H281DRAFT_00932 - hypothetical protein, at 1,035,377 to 1,036,117
_00932
H281DRAFT_00933: H281DRAFT_00933 - hypothetical protein, at 1,036,294 to 1,036,650
_00933
H281DRAFT_00934: H281DRAFT_00934 - Small-conductance mechanosensitive channel, at 1,036,913 to 1,038,148
_00934
Position (kb)
1035
1036
1037 Strain fitness (log2 ratio)
-2
-1
0
1 at 1034.608 kb on - strand at 1034.704 kb on + strand, within H281DRAFT_00931 at 1034.821 kb on + strand, within H281DRAFT_00931 at 1034.822 kb on - strand, within H281DRAFT_00931 at 1034.822 kb on - strand, within H281DRAFT_00931 at 1034.929 kb on - strand, within H281DRAFT_00931 at 1034.955 kb on - strand, within H281DRAFT_00931 at 1035.055 kb on + strand, within H281DRAFT_00931 at 1035.056 kb on - strand, within H281DRAFT_00931 at 1035.193 kb on - strand, within H281DRAFT_00931 at 1035.193 kb on - strand, within H281DRAFT_00931 at 1035.205 kb on + strand, within H281DRAFT_00931 at 1035.215 kb on - strand, within H281DRAFT_00931 at 1035.366 kb on + strand at 1035.392 kb on - strand at 1035.392 kb on - strand at 1035.846 kb on - strand, within H281DRAFT_00932 at 1036.055 kb on + strand at 1036.055 kb on + strand at 1036.056 kb on - strand at 1036.057 kb on + strand at 1036.057 kb on + strand at 1036.421 kb on - strand, within H281DRAFT_00933 at 1036.421 kb on - strand, within H281DRAFT_00933 at 1036.421 kb on - strand, within H281DRAFT_00933 at 1036.456 kb on - strand, within H281DRAFT_00933 at 1036.473 kb on + strand, within H281DRAFT_00933 at 1036.477 kb on - strand, within H281DRAFT_00933 at 1036.499 kb on - strand, within H281DRAFT_00933 at 1036.547 kb on + strand, within H281DRAFT_00933 at 1036.555 kb on + strand, within H281DRAFT_00933 at 1036.555 kb on + strand, within H281DRAFT_00933 at 1036.555 kb on + strand, within H281DRAFT_00933 at 1036.556 kb on - strand, within H281DRAFT_00933 at 1036.556 kb on - strand, within H281DRAFT_00933 at 1036.648 kb on + strand at 1036.648 kb on + strand at 1036.648 kb on + strand at 1036.670 kb on + strand at 1036.782 kb on + strand at 1036.782 kb on + strand at 1036.924 kb on - strand at 1036.970 kb on - strand at 1036.970 kb on - strand at 1036.970 kb on - strand at 1036.970 kb on - strand at 1037.044 kb on + strand, within H281DRAFT_00934 at 1037.096 kb on + strand, within H281DRAFT_00934 at 1037.097 kb on - strand, within H281DRAFT_00934 at 1037.098 kb on + strand, within H281DRAFT_00934
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,034,608 - -0.7 1,034,704 + H281DRAFT_00931 0.21 +0.1 1,034,821 + H281DRAFT_00931 0.36 -0.8 1,034,822 - H281DRAFT_00931 0.36 +0.0 1,034,822 - H281DRAFT_00931 0.36 -1.0 1,034,929 - H281DRAFT_00931 0.49 -0.7 1,034,955 - H281DRAFT_00931 0.53 -0.5 1,035,055 + H281DRAFT_00931 0.65 +0.8 1,035,056 - H281DRAFT_00931 0.65 +0.4 1,035,193 - H281DRAFT_00931 0.83 -0.3 1,035,193 - H281DRAFT_00931 0.83 +0.7 1,035,205 + H281DRAFT_00931 0.84 +0.7 1,035,215 - H281DRAFT_00931 0.85 -0.2 1,035,366 + +0.7 1,035,392 - -1.3 1,035,392 - +0.2 1,035,846 - H281DRAFT_00932 0.63 -0.1 1,036,055 + +0.1 1,036,055 + +0.2 1,036,056 - -0.3 1,036,057 + -0.4 1,036,057 + +0.1 1,036,421 - H281DRAFT_00933 0.36 -1.3 1,036,421 - H281DRAFT_00933 0.36 -1.6 1,036,421 - H281DRAFT_00933 0.36 -0.3 1,036,456 - H281DRAFT_00933 0.45 -1.4 1,036,473 + H281DRAFT_00933 0.50 -0.6 1,036,477 - H281DRAFT_00933 0.51 -1.1 1,036,499 - H281DRAFT_00933 0.57 -0.8 1,036,547 + H281DRAFT_00933 0.71 -0.6 1,036,555 + H281DRAFT_00933 0.73 -0.7 1,036,555 + H281DRAFT_00933 0.73 +0.2 1,036,555 + H281DRAFT_00933 0.73 -0.3 1,036,556 - H281DRAFT_00933 0.73 -1.8 1,036,556 - H281DRAFT_00933 0.73 -1.9 1,036,648 + -0.1 1,036,648 + +0.3 1,036,648 + +0.2 1,036,670 + +0.4 1,036,782 + +1.3 1,036,782 + -0.8 1,036,924 - +0.3 1,036,970 - +0.6 1,036,970 - -0.5 1,036,970 - +0.1 1,036,970 - +0.1 1,037,044 + H281DRAFT_00934 0.11 +0.7 1,037,096 + H281DRAFT_00934 0.15 +0.5 1,037,097 - H281DRAFT_00934 0.15 +0.8 1,037,098 + H281DRAFT_00934 0.15 -0.7
Or see this region's nucleotide sequence