Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00910 and H281DRAFT_00911 are separated by 10 nucleotides H281DRAFT_00911 and H281DRAFT_00912 are separated by 1 nucleotides H281DRAFT_00912 and H281DRAFT_00913 are separated by 388 nucleotides H281DRAFT_00913 and H281DRAFT_00914 are separated by 49 nucleotides
H281DRAFT_00910: H281DRAFT_00910 - peptidyl-prolyl cis-trans isomerase C, at 1,012,652 to 1,013,431
_00910
H281DRAFT_00911: H281DRAFT_00911 - transcriptional regulator, BolA protein family, at 1,013,442 to 1,013,753
_00911
H281DRAFT_00912: H281DRAFT_00912 - intracellular septation protein, at 1,013,755 to 1,014,285
_00912
H281DRAFT_00913: H281DRAFT_00913 - peptide-methionine (R)-S-oxide reductase, at 1,014,674 to 1,015,096
_00913
H281DRAFT_00914: H281DRAFT_00914 - Uncharacterized conserved protein YdiU, UPF0061 family, at 1,015,146 to 1,016,702
_00914
Position (kb)
1013
1014
1015 Strain fitness (log2 ratio)
-1
0
1 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.875 kb on + strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1012.876 kb on - strand, within H281DRAFT_00910 at 1013.038 kb on - strand, within H281DRAFT_00910 at 1013.477 kb on - strand, within H281DRAFT_00911 at 1013.477 kb on - strand, within H281DRAFT_00911 at 1013.534 kb on - strand, within H281DRAFT_00911 at 1013.691 kb on - strand, within H281DRAFT_00911 at 1013.744 kb on + strand at 1013.771 kb on + strand at 1014.692 kb on + strand at 1014.692 kb on + strand at 1014.692 kb on + strand at 1014.859 kb on - strand, within H281DRAFT_00913 at 1014.859 kb on - strand, within H281DRAFT_00913 at 1014.859 kb on - strand, within H281DRAFT_00913 at 1014.859 kb on - strand, within H281DRAFT_00913 at 1014.933 kb on + strand, within H281DRAFT_00913 at 1014.934 kb on - strand, within H281DRAFT_00913 at 1014.961 kb on - strand, within H281DRAFT_00913 at 1015.097 kb on - strand at 1015.119 kb on + strand at 1015.119 kb on + strand at 1015.202 kb on - strand at 1015.202 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,012,875 + H281DRAFT_00910 0.29 -0.9 1,012,875 + H281DRAFT_00910 0.29 -0.1 1,012,875 + H281DRAFT_00910 0.29 +0.5 1,012,875 + H281DRAFT_00910 0.29 -0.6 1,012,875 + H281DRAFT_00910 0.29 -0.2 1,012,876 - H281DRAFT_00910 0.29 -0.3 1,012,876 - H281DRAFT_00910 0.29 -1.3 1,012,876 - H281DRAFT_00910 0.29 -0.5 1,012,876 - H281DRAFT_00910 0.29 -0.1 1,013,038 - H281DRAFT_00910 0.49 -0.6 1,013,477 - H281DRAFT_00911 0.11 +0.6 1,013,477 - H281DRAFT_00911 0.11 -0.3 1,013,534 - H281DRAFT_00911 0.29 -0.3 1,013,691 - H281DRAFT_00911 0.80 -0.5 1,013,744 + +0.3 1,013,771 + -0.2 1,014,692 + -0.2 1,014,692 + -0.1 1,014,692 + +0.0 1,014,859 - H281DRAFT_00913 0.44 -0.1 1,014,859 - H281DRAFT_00913 0.44 -0.4 1,014,859 - H281DRAFT_00913 0.44 -0.7 1,014,859 - H281DRAFT_00913 0.44 -0.1 1,014,933 + H281DRAFT_00913 0.61 -0.7 1,014,934 - H281DRAFT_00913 0.61 -0.3 1,014,961 - H281DRAFT_00913 0.68 -0.7 1,015,097 - -0.2 1,015,119 + -0.1 1,015,119 + -0.5 1,015,202 - -0.3 1,015,202 - -0.5
Or see this region's nucleotide sequence