Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00379 and H281DRAFT_00380 are separated by 126 nucleotides H281DRAFT_00380 and H281DRAFT_00381 are separated by 52 nucleotides
H281DRAFT_00379: H281DRAFT_00379 - dihydroorotate oxidase B, catalytic subunit /dihydrouracil dehydrogenase (NAD+) /dihydropyrimidine dehydrogenase (NADP+), at 417,964 to 419,292
_00379
H281DRAFT_00380: H281DRAFT_00380 - nucleobase:cation symporter-1, NCS1 family, at 419,419 to 420,930
_00380
H281DRAFT_00381: H281DRAFT_00381 - dihydropyrimidinase, at 420,983 to 422,434
_00381
Position (kb) 419
420
421 Strain fitness (log2 ratio) -1
0
1 at 418.964 kb on - strand, within H281DRAFT_00379 at 419.241 kb on - strand at 419.325 kb on + strand at 419.326 kb on - strand at 419.404 kb on - strand at 419.534 kb on - strand at 419.534 kb on - strand at 419.613 kb on + strand, within H281DRAFT_00380 at 419.614 kb on - strand, within H281DRAFT_00380 at 419.648 kb on + strand, within H281DRAFT_00380 at 419.837 kb on - strand, within H281DRAFT_00380 at 419.951 kb on - strand, within H281DRAFT_00380 at 419.951 kb on - strand, within H281DRAFT_00380 at 419.968 kb on - strand, within H281DRAFT_00380 at 420.452 kb on - strand, within H281DRAFT_00380 at 420.565 kb on + strand, within H281DRAFT_00380 at 420.566 kb on - strand, within H281DRAFT_00380 at 420.567 kb on + strand, within H281DRAFT_00380 at 420.568 kb on - strand, within H281DRAFT_00380 at 420.624 kb on - strand, within H281DRAFT_00380 at 420.635 kb on - strand, within H281DRAFT_00380 at 420.694 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.697 kb on - strand at 420.702 kb on + strand, within H281DRAFT_00380 at 420.822 kb on + strand at 420.829 kb on + strand at 420.835 kb on + strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.968 kb on + strand at 421.178 kb on - strand, within H281DRAFT_00381 at 421.221 kb on - strand, within H281DRAFT_00381 at 421.395 kb on - strand, within H281DRAFT_00381 at 421.395 kb on - strand, within H281DRAFT_00381 at 421.817 kb on + strand, within H281DRAFT_00381
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 418,964 - H281DRAFT_00379 0.75 +0.5 419,241 - -0.7 419,325 + -0.4 419,326 - -0.0 419,404 - +0.2 419,534 - -0.8 419,534 - +0.4 419,613 + H281DRAFT_00380 0.13 -0.7 419,614 - H281DRAFT_00380 0.13 -0.1 419,648 + H281DRAFT_00380 0.15 +0.4 419,837 - H281DRAFT_00380 0.28 -0.3 419,951 - H281DRAFT_00380 0.35 -0.3 419,951 - H281DRAFT_00380 0.35 +0.3 419,968 - H281DRAFT_00380 0.36 +0.6 420,452 - H281DRAFT_00380 0.68 +0.1 420,565 + H281DRAFT_00380 0.76 +0.7 420,566 - H281DRAFT_00380 0.76 -0.1 420,567 + H281DRAFT_00380 0.76 -0.6 420,568 - H281DRAFT_00380 0.76 -0.7 420,624 - H281DRAFT_00380 0.80 -0.5 420,635 - H281DRAFT_00380 0.80 +0.3 420,694 + H281DRAFT_00380 0.84 +0.3 420,696 + H281DRAFT_00380 0.84 +0.1 420,696 + H281DRAFT_00380 0.84 +1.2 420,696 + H281DRAFT_00380 0.84 -0.6 420,696 + H281DRAFT_00380 0.84 -0.6 420,697 - +1.1 420,702 + H281DRAFT_00380 0.85 -0.1 420,822 + +0.9 420,829 + -1.2 420,835 + -0.2 420,836 - -0.6 420,836 - +0.3 420,836 - +0.4 420,836 - +0.3 420,968 + -0.0 421,178 - H281DRAFT_00381 0.13 +0.9 421,221 - H281DRAFT_00381 0.16 +0.9 421,395 - H281DRAFT_00381 0.28 +0.7 421,395 - H281DRAFT_00381 0.28 +0.6 421,817 + H281DRAFT_00381 0.57 +0.7
Or see this region's nucleotide sequence