Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3311

Experiment: 1-ethyl-3-methylimidazolium chloride 20 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 20 mM
3,435,013	+		Ga0059261_3310	0.32	-0.3
3,435,013	+		Ga0059261_3310	0.32	-0.2
3,435,013	+		Ga0059261_3310	0.32	+0.3
3,435,013	+		Ga0059261_3310	0.32	-0.2
3,435,013	+		Ga0059261_3310	0.32	-0.8
3,435,014	-		Ga0059261_3310	0.32	+0.7
3,435,014	-		Ga0059261_3310	0.32	-0.2
3,435,014	-		Ga0059261_3310	0.32	+0.3
3,435,014	-		Ga0059261_3310	0.32	-0.0
3,435,014	-		Ga0059261_3310	0.32	-0.2
3,435,023	+		Ga0059261_3310	0.33	-0.5
3,435,073	+		Ga0059261_3310	0.37	-0.4
3,435,074	-		Ga0059261_3310	0.37	-1.4
3,435,074	-				+0.5
3,435,074	-		Ga0059261_3310	0.37	-0.2
3,435,074	-		Ga0059261_3310	0.37	+0.8
3,435,174	-		Ga0059261_3310	0.46	-0.0
3,435,394	+		Ga0059261_3310	0.64	+1.4
3,435,394	+		Ga0059261_3310	0.64	+0.7
3,435,394	+		Ga0059261_3310	0.64	-0.2
3,435,394	+		Ga0059261_3310	0.64	-0.9
3,435,395	-		Ga0059261_3310	0.64	+0.5
3,435,451	+		Ga0059261_3310	0.69	-0.3
3,435,451	+		Ga0059261_3310	0.69	-0.9
3,435,452	-		Ga0059261_3310	0.69	-1.0
3,435,452	-		Ga0059261_3310	0.69	-0.1
3,435,452	-		Ga0059261_3310	0.69	+1.0
3,435,452	-		Ga0059261_3310	0.69	+0.1
3,435,452	-		Ga0059261_3310	0.69	-0.3
3,435,538	+		Ga0059261_3310	0.76	-0.2
3,435,538	+		Ga0059261_3310	0.76	+0.4
3,435,538	+		Ga0059261_3310	0.76	-0.7
3,435,538	+		Ga0059261_3310	0.76	+0.2
3,435,539	-		Ga0059261_3310	0.76	-0.7
3,435,539	-		Ga0059261_3310	0.76	-1.0
3,435,539	-		Ga0059261_3310	0.76	-0.6
3,435,539	-		Ga0059261_3310	0.76	-0.0
3,435,547	+		Ga0059261_3310	0.77	-0.3
3,435,547	+		Ga0059261_3310	0.77	+0.5
3,435,548	-		Ga0059261_3310	0.77	-0.0
3,435,608	+		Ga0059261_3310	0.82	-0.0
3,435,625	+		Ga0059261_3310	0.83	+0.5
3,435,626	-		Ga0059261_3310	0.83	+0.1
3,435,679	+		Ga0059261_3310	0.88	+0.7
3,435,680	-		Ga0059261_3310	0.88	+0.9
3,435,680	-		Ga0059261_3310	0.88	-0.2
3,435,680	-				+0.5
3,435,680	-		Ga0059261_3310	0.88	+1.5
3,435,680	-		Ga0059261_3310	0.88	+0.7
3,435,680	-		Ga0059261_3310	0.88	+0.2
3,435,885	+				+0.0
3,435,886	-				-1.3
3,435,886	-				-0.2
3,435,907	-				+0.4
3,435,907	-				+0.3
3,435,912	+				+0.1
3,435,913	-				-0.6
3,435,913	-				+0.8
3,435,913	-				-2.4
3,435,951	+		Ga0059261_3311	0.10	-0.0
3,435,951	+		Ga0059261_3311	0.10	-0.3
3,435,951	+		Ga0059261_3311	0.10	-0.5
3,435,951	+		Ga0059261_3311	0.10	+0.4
3,435,952	-		Ga0059261_3311	0.10	+0.1
3,435,952	-		Ga0059261_3311	0.10	-0.4
3,435,952	-		Ga0059261_3311	0.10	+1.7
3,435,978	+		Ga0059261_3311	0.12	-0.1
3,435,978	+		Ga0059261_3311	0.12	-0.2
3,435,979	-		Ga0059261_3311	0.12	-0.4
3,435,979	-		Ga0059261_3311	0.12	+0.3
3,436,041	+		Ga0059261_3311	0.17	-0.6
3,436,047	+		Ga0059261_3311	0.18	+0.1
3,436,048	-		Ga0059261_3311	0.18	-0.5
3,436,048	-		Ga0059261_3311	0.18	-0.9
3,436,048	-		Ga0059261_3311	0.18	-0.0
3,436,048	-		Ga0059261_3311	0.18	-0.0
3,436,048	-		Ga0059261_3311	0.18	+0.4
3,436,053	+		Ga0059261_3311	0.18	+0.2
3,436,053	+		Ga0059261_3311	0.18	-0.7
3,436,053	+		Ga0059261_3311	0.18	-0.2
3,436,053	+		Ga0059261_3311	0.18	-0.3
3,436,053	+		Ga0059261_3311	0.18	+0.1
3,436,054	-		Ga0059261_3311	0.18	-0.0
3,436,054	-				-1.0
3,436,150	+		Ga0059261_3311	0.26	+0.4
3,436,151	-		Ga0059261_3311	0.26	+0.2
3,436,152	+		Ga0059261_3311	0.26	-0.0
3,436,152	+		Ga0059261_3311	0.26	+0.1
3,436,152	+		Ga0059261_3311	0.26	-0.1
3,436,152	+		Ga0059261_3311	0.26	+0.4
3,436,152	+		Ga0059261_3311	0.26	-0.2
3,436,152	+		Ga0059261_3311	0.26	+0.1
3,436,152	+		Ga0059261_3311	0.26	-1.3
3,436,152	+		Ga0059261_3311	0.26	-2.2
3,436,153	-		Ga0059261_3311	0.26	-1.1
3,436,153	-		Ga0059261_3311	0.26	-0.1
3,436,153	-		Ga0059261_3311	0.26	+0.1
3,436,153	-		Ga0059261_3311	0.26	-0.9
3,436,197	+		Ga0059261_3311	0.30	+0.2
3,436,197	+		Ga0059261_3311	0.30	+0.7
3,436,197	+		Ga0059261_3311	0.30	-0.0
3,436,197	+		Ga0059261_3311	0.30	-0.1
3,436,197	+		Ga0059261_3311	0.30	-1.0
3,436,197	+		Ga0059261_3311	0.30	-0.2
3,436,197	+		Ga0059261_3311	0.30	-0.6
3,436,198	-		Ga0059261_3311	0.30	-0.9
3,436,198	-		Ga0059261_3311	0.30	+0.5
3,436,198	-		Ga0059261_3311	0.30	+0.7
3,436,198	-		Ga0059261_3311	0.30	-0.2
3,436,198	-		Ga0059261_3311	0.30	+0.2
3,436,198	-		Ga0059261_3311	0.30	+0.3
3,436,198	-		Ga0059261_3311	0.30	-0.6
3,436,198	-		Ga0059261_3311	0.30	-0.4
3,436,242	+		Ga0059261_3311	0.34	-0.2
3,436,317	+		Ga0059261_3311	0.40	+0.2
3,436,317	+		Ga0059261_3311	0.40	+0.5
3,436,317	+		Ga0059261_3311	0.40	-0.4
3,436,317	+		Ga0059261_3311	0.40	-0.5
3,436,318	-		Ga0059261_3311	0.40	+0.0
3,436,318	-		Ga0059261_3311	0.40	-0.3
3,436,318	-		Ga0059261_3311	0.40	-0.7
3,436,318	-		Ga0059261_3311	0.40	-0.4
3,436,318	-		Ga0059261_3311	0.40	-0.6
3,436,318	-		Ga0059261_3311	0.40	+0.4
3,436,320	+		Ga0059261_3311	0.40	-0.3
3,436,320	+		Ga0059261_3311	0.40	+0.2
3,436,320	+		Ga0059261_3311	0.40	+0.4
3,436,320	+		Ga0059261_3311	0.40	+0.8
3,436,320	+		Ga0059261_3311	0.40	+0.2
3,436,320	+		Ga0059261_3311	0.40	-0.6
3,436,320	+		Ga0059261_3311	0.40	-0.4
3,436,320	+		Ga0059261_3311	0.40	-0.4
3,436,321	-		Ga0059261_3311	0.40	+0.6
3,436,321	-		Ga0059261_3311	0.40	-0.4
3,436,321	-		Ga0059261_3311	0.40	+0.3
3,436,321	-		Ga0059261_3311	0.40	-0.2
3,436,321	-		Ga0059261_3311	0.40	-0.2
3,436,321	-		Ga0059261_3311	0.40	+0.3
3,436,321	-		Ga0059261_3311	0.40	+0.3
3,436,321	-		Ga0059261_3311	0.40	-0.4
3,436,321	-		Ga0059261_3311	0.40	-0.0
3,436,321	-		Ga0059261_3311	0.40	+0.1
3,436,479	+				+0.4
3,436,479	+		Ga0059261_3311	0.53	-0.3
3,436,479	+		Ga0059261_3311	0.53	-0.2
3,436,479	+		Ga0059261_3311	0.53	-0.6
3,436,479	+		Ga0059261_3311	0.53	-0.6
3,436,479	+		Ga0059261_3311	0.53	-1.8
3,436,480	-		Ga0059261_3311	0.53	-0.8
3,436,480	-		Ga0059261_3311	0.53	+0.5
3,436,480	-		Ga0059261_3311	0.53	-0.2
3,436,480	-		Ga0059261_3311	0.53	-0.7
3,436,480	-		Ga0059261_3311	0.53	+0.8
3,436,480	-		Ga0059261_3311	0.53	+0.0
3,436,480	-		Ga0059261_3311	0.53	+0.2
3,436,480	-		Ga0059261_3311	0.53	-0.3
3,436,480	-				+0.5
3,436,705	+		Ga0059261_3311	0.71	-0.6
3,436,705	+		Ga0059261_3311	0.71	-0.0
3,436,705	+		Ga0059261_3311	0.71	-0.2
3,436,705	+		Ga0059261_3311	0.71	-0.6
3,436,706	-		Ga0059261_3311	0.71	-0.0
3,436,706	-		Ga0059261_3311	0.71	+0.7
3,436,706	-		Ga0059261_3311	0.71	-1.0
3,436,706	-		Ga0059261_3311	0.71	-0.0
3,436,706	-		Ga0059261_3311	0.71	+0.0
3,436,706	-		Ga0059261_3311	0.71	-1.4
3,436,706	-		Ga0059261_3311	0.71	-1.7
3,436,706	-		Ga0059261_3311	0.71	-0.9
3,436,706	-		Ga0059261_3311	0.71	-1.0
3,436,706	-		Ga0059261_3311	0.71	+1.5
3,436,722	+		Ga0059261_3311	0.72	-0.2
3,436,723	-		Ga0059261_3311	0.72	-0.4
3,436,780	-		Ga0059261_3311	0.77	+0.3
3,436,780	-		Ga0059261_3311	0.77	-0.6
3,436,780	-		Ga0059261_3311	0.77	+0.4
3,437,062	+				-0.1
3,437,062	+				-0.4
3,437,063	-				-0.2
3,437,074	+				-0.1
3,437,074	+				-0.2
3,437,074	+				-0.1
3,437,311	+		Ga0059261_3312	0.22	+0.4
3,437,312	-		Ga0059261_3312	0.22	-0.3
3,437,407	-		Ga0059261_3312	0.31	-0.9
3,437,599	+		Ga0059261_3312	0.48	-0.2
3,437,599	+		Ga0059261_3312	0.48	-0.0
3,437,599	+		Ga0059261_3312	0.48	+0.1
3,437,600	-		Ga0059261_3312	0.48	+0.2
3,437,600	-		Ga0059261_3312	0.48	-2.0
3,437,748	+		Ga0059261_3312	0.62	+0.1
3,437,748	+		Ga0059261_3312	0.62	-0.9
3,437,810	+		Ga0059261_3312	0.68	-0.9
3,437,810	+		Ga0059261_3312	0.68	+0.4
3,437,810	+		Ga0059261_3312	0.68	+0.4
3,437,811	-		Ga0059261_3312	0.68	-0.3
3,437,811	-		Ga0059261_3312	0.68	-0.1
3,437,811	-		Ga0059261_3312	0.68	-1.1
3,437,811	-		Ga0059261_3312	0.68	+0.5
3,437,811	-		Ga0059261_3312	0.68	+0.9
3,437,811	-		Ga0059261_3312	0.68	-0.6
3,437,872	+		Ga0059261_3312	0.73	-0.1
3,437,873	-		Ga0059261_3312	0.73	+0.4
3,437,873	-		Ga0059261_3312	0.73	-0.1
3,437,873	-		Ga0059261_3312	0.73	-0.6
3,437,875	+		Ga0059261_3312	0.74	-0.5
3,437,875	+		Ga0059261_3312	0.74	+0.3
3,437,876	-		Ga0059261_3312	0.74	+1.1
3,437,876	-		Ga0059261_3312	0.74	+0.8
3,437,876	-		Ga0059261_3312	0.74	-0.3
3,437,876	-		Ga0059261_3312	0.74	+0.0
3,437,876	-		Ga0059261_3312	0.74	-0.3
3,437,884	+		Ga0059261_3312	0.74	-0.3
3,437,884	+		Ga0059261_3312	0.74	-0.8
3,437,884	+		Ga0059261_3312	0.74	-0.5
3,437,884	+				-1.1
3,437,884	+		Ga0059261_3312	0.74	-0.7
3,437,884	+		Ga0059261_3312	0.74	-0.3
3,437,885	-		Ga0059261_3312	0.75	+0.1
3,437,885	-		Ga0059261_3312	0.75	-0.5
3,437,885	-		Ga0059261_3312	0.75	-0.1
3,437,885	-		Ga0059261_3312	0.75	-0.1
3,437,954	+		Ga0059261_3312	0.81	+0.1
3,437,954	+		Ga0059261_3312	0.81	+0.1
3,437,954	+		Ga0059261_3312	0.81	+1.1
3,437,955	-		Ga0059261_3312	0.81	+0.3