Experiment: 1-ethyl-3-methylimidazolium chloride 20 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0746 and Ga0059261_0747 are separated by 92 nucleotides Ga0059261_0747 and Ga0059261_0748 overlap by 1 nucleotides Ga0059261_0748 and Ga0059261_0749 are separated by 109 nucleotides Ga0059261_0749 and Ga0059261_0750 are separated by 93 nucleotides Ga0059261_0750 and Ga0059261_0751 are separated by 1 nucleotides
Ga0059261_0746: Ga0059261_0746 - Predicted permease, DMT superfamily, at 775,534 to 776,433
_0746
Ga0059261_0747: Ga0059261_0747 - Protein of unknown function (DUF2975), at 776,526 to 777,041
_0747
Ga0059261_0748: Ga0059261_0748 - Predicted transcriptional regulator, at 777,041 to 777,250
_0748
Ga0059261_0749: Ga0059261_0749 - Membrane transporters of cations and cationic drugs, at 777,360 to 777,680
_0749
Ga0059261_0750: Ga0059261_0750 - NADH:ubiquinone oxidoreductase subunit 3 (chain A), at 777,774 to 778,151
_0750
Ga0059261_0751: Ga0059261_0751 - DNA repair protein RadA, at 778,153 to 779,520
_0751
Position (kb) 777
778 Strain fitness (log2 ratio) -2
-1
0
1
2 at 776.444 kb on + strand at 776.444 kb on + strand at 776.511 kb on + strand at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 776.745 kb on + strand, within Ga0059261_0747 at 777.233 kb on + strand at 777.270 kb on + strand at 777.270 kb on + strand at 777.270 kb on + strand at 777.343 kb on + strand at 777.343 kb on + strand at 777.344 kb on - strand at 777.344 kb on - strand at 777.344 kb on - strand at 777.372 kb on + strand at 777.372 kb on + strand at 777.372 kb on + strand at 777.372 kb on + strand at 777.373 kb on - strand at 777.373 kb on - strand at 777.534 kb on + strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.535 kb on - strand, within Ga0059261_0749 at 777.640 kb on + strand at 777.640 kb on + strand, within Ga0059261_0749 at 777.640 kb on + strand, within Ga0059261_0749 at 777.641 kb on - strand, within Ga0059261_0749 at 777.641 kb on - strand, within Ga0059261_0749 at 777.641 kb on - strand, within Ga0059261_0749 at 777.829 kb on + strand, within Ga0059261_0750 at 777.830 kb on - strand, within Ga0059261_0750 at 777.918 kb on + strand, within Ga0059261_0750 at 777.919 kb on - strand, within Ga0059261_0750 at 777.919 kb on - strand, within Ga0059261_0750 at 777.919 kb on - strand, within Ga0059261_0750 at 777.975 kb on + strand, within Ga0059261_0750 at 777.975 kb on + strand, within Ga0059261_0750 at 777.976 kb on - strand, within Ga0059261_0750 at 777.976 kb on - strand, within Ga0059261_0750 at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.116 kb on + strand at 778.117 kb on - strand at 778.117 kb on - strand at 778.117 kb on - strand at 778.117 kb on - strand at 778.149 kb on + strand at 778.149 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.167 kb on + strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.168 kb on - strand at 778.451 kb on + strand, within Ga0059261_0751 at 778.452 kb on - strand, within Ga0059261_0751 at 778.495 kb on + strand at 778.577 kb on - strand, within Ga0059261_0751 at 778.630 kb on + strand, within Ga0059261_0751 at 778.631 kb on - strand, within Ga0059261_0751 at 778.631 kb on - strand, within Ga0059261_0751 at 778.631 kb on - strand, within Ga0059261_0751
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium chloride 20 mM remove 776,444 + +0.2 776,444 + +0.4 776,511 + +1.1 776,745 + Ga0059261_0747 0.42 -0.3 776,745 + Ga0059261_0747 0.42 -0.9 776,745 + Ga0059261_0747 0.42 +0.2 776,745 + Ga0059261_0747 0.42 -0.9 776,745 + Ga0059261_0747 0.42 -0.8 776,745 + Ga0059261_0747 0.42 -0.4 776,745 + Ga0059261_0747 0.42 +0.4 776,745 + Ga0059261_0747 0.42 +0.1 776,745 + Ga0059261_0747 0.42 -0.3 777,233 + -2.4 777,270 + +0.2 777,270 + -0.5 777,270 + -0.5 777,343 + +1.4 777,343 + +2.0 777,344 - -0.2 777,344 - -2.2 777,344 - -0.5 777,372 + +0.3 777,372 + -0.3 777,372 + -1.9 777,372 + -0.5 777,373 - -1.4 777,373 - +0.5 777,534 + Ga0059261_0749 0.54 -0.1 777,535 - Ga0059261_0749 0.55 -1.9 777,535 - Ga0059261_0749 0.55 -0.7 777,535 - Ga0059261_0749 0.55 -1.7 777,535 - Ga0059261_0749 0.55 -0.6 777,535 - Ga0059261_0749 0.55 +0.3 777,640 + +1.3 777,640 + Ga0059261_0749 0.87 +0.2 777,640 + Ga0059261_0749 0.87 -0.5 777,641 - Ga0059261_0749 0.88 -0.5 777,641 - Ga0059261_0749 0.88 -2.0 777,641 - Ga0059261_0749 0.88 +1.0 777,829 + Ga0059261_0750 0.15 -0.3 777,830 - Ga0059261_0750 0.15 +0.4 777,918 + Ga0059261_0750 0.38 +0.4 777,919 - Ga0059261_0750 0.38 +0.2 777,919 - Ga0059261_0750 0.38 +0.0 777,919 - Ga0059261_0750 0.38 +0.1 777,975 + Ga0059261_0750 0.53 +0.3 777,975 + Ga0059261_0750 0.53 -0.2 777,976 - Ga0059261_0750 0.53 +0.4 777,976 - Ga0059261_0750 0.53 -0.9 778,116 + -1.0 778,116 + +0.0 778,116 + +0.8 778,116 + -0.4 778,116 + -1.0 778,116 + -0.0 778,116 + -0.3 778,117 - -0.9 778,117 - +0.5 778,117 - +0.5 778,117 - -1.6 778,149 + -0.1 778,149 + -0.8 778,167 + +0.1 778,167 + +0.2 778,167 + -0.2 778,167 + -1.0 778,167 + -0.5 778,167 + +0.2 778,167 + +0.1 778,167 + -0.5 778,167 + +0.2 778,168 - -0.9 778,168 - -0.7 778,168 - +0.5 778,168 - -0.4 778,168 - -0.1 778,451 + Ga0059261_0751 0.22 -0.2 778,452 - Ga0059261_0751 0.22 -0.0 778,495 + +1.0 778,577 - Ga0059261_0751 0.31 +0.6 778,630 + Ga0059261_0751 0.35 -0.0 778,631 - Ga0059261_0751 0.35 +0.1 778,631 - Ga0059261_0751 0.35 -0.0 778,631 - Ga0059261_0751 0.35 -0.5
Or see this region's nucleotide sequence