Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03432

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,594,626	+		CCNA_03431	0.24	-0.8
3,594,626	+		CCNA_03431	0.24	-0.8
3,594,642	+		CCNA_03431	0.25	-2.1
3,594,650	-		CCNA_03431	0.25	+0.9
3,594,694	+				+0.6
3,594,746	+		CCNA_03431	0.33	-0.9
3,594,747	+		CCNA_03431	0.33	-1.5
3,594,763	-		CCNA_03431	0.34	-3.0
3,594,769	+		CCNA_03431	0.35	-1.8
3,594,779	-		CCNA_03431	0.35	-2.6
3,594,790	+		CCNA_03431	0.36	-4.6
3,594,820	+		CCNA_03431	0.39	-1.0
3,594,827	+		CCNA_03431	0.39	-3.7
3,594,857	+		CCNA_03431	0.41	+0.4
3,594,857	+		CCNA_03431	0.41	+0.5
3,594,857	+		CCNA_03431	0.41	-1.4
3,594,863	+		CCNA_03431	0.42	-1.7
3,594,863	+		CCNA_03431	0.42	+0.8
3,594,865	-		CCNA_03431	0.42	-3.1
3,594,865	-		CCNA_03431	0.42	+0.8
3,594,888	-		CCNA_03431	0.44	-1.9
3,594,911	+		CCNA_03431	0.46	-0.6
3,594,926	+		CCNA_03431	0.47	-1.5
3,594,926	+		CCNA_03431	0.47	-2.0
3,594,934	+		CCNA_03431	0.47	-1.2
3,594,934	-		CCNA_03431	0.47	-3.1
3,594,934	-		CCNA_03431	0.47	-1.2
3,594,934	-		CCNA_03431	0.47	-2.0
3,594,953	+		CCNA_03431	0.49	-2.1
3,594,954	+		CCNA_03431	0.49	+0.2
3,594,957	-		CCNA_03431	0.49	-2.7
3,594,959	+		CCNA_03431	0.49	-0.3
3,594,962	-		CCNA_03431	0.49	-1.7
3,594,980	+		CCNA_03431	0.51	-1.2
3,594,993	+		CCNA_03431	0.52	-3.2
3,594,993	+		CCNA_03431	0.52	-4.2
3,594,993	+		CCNA_03431	0.52	-1.1
3,594,993	+		CCNA_03431	0.52	-1.9
3,594,999	-		CCNA_03431	0.52	-2.7
3,595,001	-		CCNA_03431	0.52	-3.1
3,595,001	-		CCNA_03431	0.52	-2.2
3,595,001	-		CCNA_03431	0.52	-0.1
3,595,001	-		CCNA_03431	0.52	-1.4
3,595,009	-		CCNA_03431	0.53	-1.7
3,595,034	-		CCNA_03431	0.55	-2.6
3,595,046	+		CCNA_03431	0.56	-0.1
3,595,047	+		CCNA_03431	0.56	-1.9
3,595,073	+		CCNA_03431	0.58	-0.6
3,595,106	+		CCNA_03431	0.61	-1.2
3,595,113	-		CCNA_03431	0.61	-3.5
3,595,124	+		CCNA_03431	0.62	-0.3
3,595,131	+		CCNA_03431	0.62	-2.0
3,595,131	+		CCNA_03431	0.62	-0.1
3,595,139	-		CCNA_03431	0.63	-1.5
3,595,156	+		CCNA_03431	0.64	-2.2
3,595,162	+		CCNA_03431	0.65	-3.2
3,595,162	-		CCNA_03431	0.65	-0.8
3,595,177	+		CCNA_03431	0.66	-2.7
3,595,199	-		CCNA_03431	0.68	-2.6
3,595,214	+		CCNA_03431	0.69	-0.8
3,595,214	+		CCNA_03431	0.69	-1.8
3,595,214	+		CCNA_03431	0.69	-0.2
3,595,214	+		CCNA_03431	0.69	-2.5
3,595,214	+		CCNA_03431	0.69	-0.8
3,595,214	+		CCNA_03431	0.69	-0.4
3,595,214	+		CCNA_03431	0.69	-0.8
3,595,214	+		CCNA_03431	0.69	-2.3
3,595,214	+		CCNA_03431	0.69	+0.8
3,595,214	+		CCNA_03431	0.69	-2.3
3,595,214	+		CCNA_03431	0.69	-1.4
3,595,214	+		CCNA_03431	0.69	-2.9
3,595,214	+		CCNA_03431	0.69	-1.2
3,595,214	+		CCNA_03431	0.69	-0.9
3,595,214	+		CCNA_03431	0.69	+0.4
3,595,214	+		CCNA_03431	0.69	-2.3
3,595,214	+		CCNA_03431	0.69	-3.1
3,595,214	+		CCNA_03431	0.69	-0.4
3,595,214	+		CCNA_03431	0.69	-2.6
3,595,214	+		CCNA_03431	0.69	-1.2
3,595,214	+		CCNA_03431	0.69	-2.4
3,595,214	+		CCNA_03431	0.69	-3.6
3,595,214	+		CCNA_03431	0.69	-1.6
3,595,214	+		CCNA_03431	0.69	-1.2
3,595,214	+		CCNA_03431	0.69	-0.8
3,595,214	+		CCNA_03431	0.69	-2.1
3,595,216	-		CCNA_03431	0.69	-3.6
3,595,222	-		CCNA_03431	0.69	-1.6
3,595,222	-		CCNA_03431	0.69	-1.9
3,595,222	-		CCNA_03431	0.69	+1.6
3,595,222	-		CCNA_03431	0.69	+0.3
3,595,222	-		CCNA_03431	0.69	+1.3
3,595,222	-		CCNA_03431	0.69	-1.9
3,595,222	-		CCNA_03431	0.69	+0.6
3,595,222	-		CCNA_03431	0.69	-1.9
3,595,222	-		CCNA_03431	0.69	-0.8
3,595,222	-		CCNA_03431	0.69	-1.7
3,595,222	-		CCNA_03431	0.69	-1.8
3,595,222	-		CCNA_03431	0.69	-0.8
3,595,222	-		CCNA_03431	0.69	+1.1
3,595,222	-		CCNA_03431	0.69	+1.3
3,595,222	-		CCNA_03431	0.69	-3.4
3,595,222	-		CCNA_03431	0.69	-2.2
3,595,222	-		CCNA_03431	0.69	-2.2
3,595,222	-		CCNA_03431	0.69	-3.7
3,595,222	-		CCNA_03431	0.69	-2.4
3,595,224	+		CCNA_03431	0.70	-2.9
3,595,229	+		CCNA_03431	0.70	-1.1
3,595,275	+		CCNA_03431	0.74	+0.7
3,595,291	-		CCNA_03431	0.75	+0.4
3,595,310	+		CCNA_03431	0.76	+0.2
3,595,317	+		CCNA_03431	0.77	-2.4
3,595,336	-		CCNA_03431	0.78	-3.2
3,595,344	-		CCNA_03431	0.79	-1.2
3,595,344	-		CCNA_03431	0.79	-0.8
3,595,348	+		CCNA_03431	0.79	+0.9
3,595,349	-		CCNA_03431	0.79	-2.2
3,595,467	+		CCNA_03431	0.88	-1.6
3,595,477	-		CCNA_03431	0.89	-1.1
3,595,499	-				-0.2
3,595,501	+				-0.9
3,595,568	+				-2.5
3,595,582	-				-2.2
3,595,589	+				+0.5
3,595,597	-				+0.3
3,595,597	-				-0.1
3,595,597	-				+4.9
3,595,597	-				+0.1
3,595,597	-				-0.3
3,595,597	-				-0.6
3,595,601	+				+0.7
3,595,601	+				-0.2
3,595,606	+				-1.9
3,595,606	+				+1.0
3,595,647	+				+1.5
3,595,647	+				+1.7
3,595,647	+				+0.4
3,595,649	+				+1.1
3,595,657	-				+1.0
3,595,657	-				+0.8
3,595,657	-				+1.9
3,595,681	-				+0.9
3,595,683	+				-1.1
3,595,683	+				+0.5
3,595,683	+				+0.7
3,595,683	+				+2.3
3,595,683	+				+0.9
3,595,691	-				-0.8
3,595,691	-				+3.3
3,595,691	-				-0.2
3,595,692	+				+3.3
3,595,699	-		CCNA_03432	0.11	+0.6
3,595,700	-		CCNA_03432	0.11	+0.9
3,595,711	+		CCNA_03432	0.12	-1.7
3,595,721	+		CCNA_03432	0.13	-0.8
3,595,721	+		CCNA_03432	0.13	-1.2
3,595,721	+		CCNA_03432	0.13	+0.9
3,595,723	+		CCNA_03432	0.13	-0.9
3,595,723	+		CCNA_03432	0.13	+1.1
3,595,723	+		CCNA_03432	0.13	-0.3
3,595,729	-		CCNA_03432	0.14	-1.0
3,595,729	-		CCNA_03432	0.14	-0.4
3,595,729	-		CCNA_03432	0.14	+0.3
3,595,731	-		CCNA_03432	0.14	-2.3
3,595,743	+		CCNA_03432	0.16	+0.1
3,595,751	-		CCNA_03432	0.17	+0.5
3,595,751	-		CCNA_03432	0.17	-1.5
3,595,753	-		CCNA_03432	0.17	+0.2
3,595,781	+		CCNA_03432	0.20	+1.6
3,595,789	-		CCNA_03432	0.21	-2.5
3,595,792	+		CCNA_03432	0.22	+1.2
3,595,798	-		CCNA_03432	0.22	+2.1
3,595,818	-		CCNA_03432	0.25	-0.8
3,595,818	-		CCNA_03432	0.25	-0.2
3,595,818	-		CCNA_03432	0.25	+0.5
3,595,827	+		CCNA_03432	0.26	+1.4
3,595,836	-		CCNA_03432	0.27	+1.5
3,595,857	+		CCNA_03432	0.29	-0.5
3,595,865	-		CCNA_03432	0.30	-2.1
3,595,960	+		CCNA_03432	0.41	-0.8
3,596,004	+		CCNA_03432	0.47	-2.0
3,596,010	+		CCNA_03432	0.47	+0.2
3,596,012	-		CCNA_03432	0.48	+1.6
3,596,012	-		CCNA_03432	0.48	-0.2
3,596,060	-		CCNA_03432	0.53	-1.3
3,596,072	-		CCNA_03432	0.55	+0.2
3,596,072	-		CCNA_03432	0.55	+1.6
3,596,085	+				+0.2
3,596,085	+		CCNA_03432	0.56	-0.1
3,596,093	-		CCNA_03432	0.57	+0.7
3,596,093	-		CCNA_03432	0.57	-0.2
3,596,095	-		CCNA_03432	0.57	-0.2
3,596,100	-		CCNA_03432	0.58	+0.7
3,596,100	-		CCNA_03432	0.58	-2.9
3,596,100	-		CCNA_03432	0.58	-1.1
3,596,100	-		CCNA_03432	0.58	+2.4
3,596,111	+		CCNA_03432	0.59	-0.1
3,596,111	+		CCNA_03432	0.59	-0.4
3,596,118	-		CCNA_03432	0.60	+1.6
3,596,119	-		CCNA_03432	0.60	+0.7
3,596,119	-		CCNA_03432	0.60	+1.7
3,596,120	-		CCNA_03432	0.60	+0.4
3,596,165	-		CCNA_03432	0.66	+0.8
3,596,178	-		CCNA_03432	0.67	+1.7
3,596,192	+		CCNA_03432	0.69	-1.6
3,596,192	+		CCNA_03432	0.69	-3.1
3,596,192	+		CCNA_03432	0.69	+1.5
3,596,200	-		CCNA_03432	0.70	+0.6
3,596,200	-		CCNA_03432	0.70	-0.8
3,596,200	-		CCNA_03432	0.70	+0.6
3,596,203	+		CCNA_03432	0.70	-1.1
3,596,204	-		CCNA_03432	0.70	+2.3
3,596,213	+		CCNA_03432	0.71	-1.1
3,596,213	+		CCNA_03432	0.71	-1.8
3,596,213	+		CCNA_03432	0.71	-0.8
3,596,213	+		CCNA_03432	0.71	-1.6
3,596,213	+		CCNA_03432	0.71	-0.4
3,596,213	+		CCNA_03432	0.71	+1.4
3,596,225	+		CCNA_03432	0.73	+0.0
3,596,288	+		CCNA_03432	0.80	-0.4
3,596,297	+		CCNA_03432	0.81	+0.0
3,596,309	-		CCNA_03432	0.83	-0.1
3,596,331	-		CCNA_03432	0.85	-1.4
3,596,341	-		CCNA_03432	0.87	-0.4
3,596,354	-		CCNA_03432	0.88	-0.7
3,596,356	+		CCNA_03432	0.88	-1.4
3,596,364	+		CCNA_03432	0.89	-2.2
3,596,365	-		CCNA_03432	0.89	-1.7
3,596,447	-				-1.0
3,596,473	-				+1.4
3,596,473	-				-3.2
3,596,485	+				-0.2
3,596,515	-				+4.3
3,596,553	+				+4.1
3,596,555	-				-0.4
3,596,559	+				-0.4
3,596,584	-				+1.8
3,596,594	+				-0.1
3,596,600	-				-2.1
3,596,629	-				-1.6
3,596,638	+				+0.9
3,596,638	+				-1.4
3,596,638	+				-1.7
3,596,638	+				-0.1
3,596,643	+				-2.7
3,596,643	+				-0.6
3,596,643	+				+1.0
3,596,643	+				+0.0
3,596,643	+				+0.7
3,596,643	+				-0.6
3,596,646	-				-2.6
3,596,646	-				+1.8
3,596,651	-				+1.0
3,596,651	-				+0.8
3,596,651	-				+1.4
3,596,651	-				+1.0
3,596,651	-				-2.2
3,596,661	+				-1.5
3,596,671	+				-2.5
3,596,671	+				-2.4
3,596,707	-		CCNA_03433	0.11	+0.7
3,596,707	-		CCNA_03433	0.11	+0.6
3,596,708	+		CCNA_03433	0.11	-2.5
3,596,713	+		CCNA_03433	0.11	+0.8
3,596,733	+		CCNA_03433	0.13	+1.9
3,596,733	+		CCNA_03433	0.13	-1.2
3,596,751	+		CCNA_03433	0.14	+2.2
3,596,758	+		CCNA_03433	0.15	-1.7
3,596,766	-		CCNA_03433	0.16	-1.2
3,596,832	-		CCNA_03433	0.21	+0.6
3,596,867	-		CCNA_03433	0.24	-1.7
3,596,878	-		CCNA_03433	0.25	-0.8
3,596,902	-		CCNA_03433	0.27	+0.7
3,596,932	+		CCNA_03433	0.29	-0.8
3,596,943	+		CCNA_03433	0.30	-1.1
3,597,042	+		CCNA_03433	0.38	-3.2
3,597,055	-		CCNA_03433	0.39	-1.5
3,597,056	-		CCNA_03433	0.39	-0.3
3,597,058	+		CCNA_03433	0.39	+1.5
3,597,079	-		CCNA_03433	0.41	+1.4
3,597,082	+		CCNA_03433	0.41	-2.0
3,597,082	+		CCNA_03433	0.41	-2.0
3,597,082	+		CCNA_03433	0.41	+2.5
3,597,095	+		CCNA_03433	0.42	-1.2
3,597,105	+		CCNA_03433	0.43	-0.9
3,597,135	+		CCNA_03433	0.46	-1.1
3,597,143	-		CCNA_03433	0.46	+1.8
3,597,158	-		CCNA_03433	0.48	-0.6
3,597,160	+		CCNA_03433	0.48	-1.4
3,597,160	+		CCNA_03433	0.48	+1.8
3,597,160	+		CCNA_03433	0.48	+0.2
3,597,160	+		CCNA_03433	0.48	-0.5
3,597,160	+		CCNA_03433	0.48	+1.3
3,597,160	+		CCNA_03433	0.48	+0.6
3,597,168	-		CCNA_03433	0.48	-0.8
3,597,168	-		CCNA_03433	0.48	-0.4
3,597,168	-		CCNA_03433	0.48	+2.7
3,597,181	+		CCNA_03433	0.49	+0.5
3,597,189	-		CCNA_03433	0.50	+0.6
3,597,190	+		CCNA_03433	0.50	-1.6
3,597,194	-		CCNA_03433	0.50	+1.8
3,597,196	+		CCNA_03433	0.51	-1.0
3,597,202	+		CCNA_03433	0.51	-1.5
3,597,202	+				+1.2
3,597,207	+		CCNA_03433	0.52	+1.4
3,597,215	-		CCNA_03433	0.52	-0.5
3,597,217	+		CCNA_03433	0.52	-1.5
3,597,217	+		CCNA_03433	0.52	-1.2
3,597,217	+		CCNA_03433	0.52	+2.9
3,597,217	+		CCNA_03433	0.52	+1.6
3,597,217	+		CCNA_03433	0.52	-1.4
3,597,217	+		CCNA_03433	0.52	-0.7
3,597,217	+		CCNA_03433	0.52	-1.5
3,597,217	+		CCNA_03433	0.52	+0.9
3,597,217	+		CCNA_03433	0.52	-0.4
3,597,225	-		CCNA_03433	0.53	-0.3
3,597,225	-		CCNA_03433	0.53	+1.2
3,597,225	-		CCNA_03433	0.53	+1.2
3,597,225	-		CCNA_03433	0.53	-1.0
3,597,225	-		CCNA_03433	0.53	+3.3
3,597,225	-		CCNA_03433	0.53	+1.0
3,597,225	-		CCNA_03433	0.53	-2.3
3,597,225	-		CCNA_03433	0.53	+0.1
3,597,225	-		CCNA_03433	0.53	+1.0
3,597,235	+		CCNA_03433	0.54	+1.3
3,597,235	+		CCNA_03433	0.54	+0.5
3,597,235	+		CCNA_03433	0.54	-0.0
3,597,243	-		CCNA_03433	0.54	+2.0
3,597,243	-		CCNA_03433	0.54	-2.0
3,597,292	-		CCNA_03433	0.58	+0.6
3,597,370	+		CCNA_03433	0.65	+0.9
3,597,371	+		CCNA_03433	0.65	+0.4
3,597,379	-		CCNA_03433	0.66	-1.1
3,597,379	-		CCNA_03433	0.66	-3.0
3,597,384	-		CCNA_03433	0.66	+1.3
3,597,404	-		CCNA_03433	0.68	+1.3
3,597,424	+		CCNA_03433	0.69	-1.5
3,597,431	+		CCNA_03433	0.70	-2.0
3,597,432	-		CCNA_03433	0.70	-0.4
3,597,450	+		CCNA_03433	0.71	-1.2