Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02925

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,086,085	+				+2.5
3,086,085	+				+0.3
3,086,093	-				+2.3
3,086,093	-				+2.3
3,086,153	+				+2.2
3,086,209	+				-0.5
3,086,209	+				-1.8
3,086,209	+				+1.0
3,086,209	+				-1.2
3,086,209	+				-0.1
3,086,217	-				+1.2
3,086,217	-				-2.4
3,086,217	-				+1.3
3,086,217	-				+1.2
3,086,217	-				-1.1
3,086,217	-				+0.5
3,086,217	-				+1.4
3,086,233	+				+1.7
3,086,250	-		CCNA_02924	0.14	-1.6
3,086,267	+		CCNA_02924	0.20	+0.4
3,086,328	-		CCNA_02924	0.42	+0.8
3,086,329	+		CCNA_02924	0.42	-0.8
3,086,359	+		CCNA_02924	0.53	-0.3
3,086,367	-				+0.9
3,086,392	+		CCNA_02924	0.65	-1.9
3,086,400	+		CCNA_02924	0.68	-0.6
3,086,413	+		CCNA_02924	0.72	+2.2
3,086,413	-		CCNA_02924	0.72	-1.2
3,086,418	+		CCNA_02924	0.74	+2.8
3,086,485	+				-0.2
3,086,485	+				+1.5
3,086,493	-				-2.0
3,086,500	+				-1.8
3,086,508	-				+1.4
3,086,513	+				+2.1
3,086,515	+				-1.4
3,086,521	-				+1.0
3,086,614	+				+1.0
3,086,636	+				-0.3
3,086,636	+				-0.1
3,086,636	+				+0.9
3,086,636	+				-0.3
3,086,636	+				+0.0
3,086,636	+				+1.3
3,086,636	+				+3.3
3,086,636	+				+1.4
3,086,636	+				-0.2
3,086,636	+				+0.9
3,086,636	+				+0.0
3,086,636	+				+0.8
3,086,636	+				+1.0
3,086,636	+				-1.0
3,086,636	+				+1.1
3,086,636	+				+0.6
3,086,636	+				+1.9
3,086,636	+				-0.0
3,086,636	+				+3.1
3,086,637	+				-0.7
3,086,637	+				-0.7
3,086,637	+				+0.9
3,086,637	-				-3.2
3,086,644	-				-1.2
3,086,644	-				+0.3
3,086,644	-				+1.0
3,086,644	-				+1.1
3,086,644	-				-0.4
3,086,644	-				+0.3
3,086,644	-				-0.8
3,086,644	-				-0.7
3,086,644	-				-1.0
3,086,644	-				+1.4
3,086,644	-				-2.8
3,086,644	-				+1.0
3,086,644	-				-1.2
3,086,644	-				-1.7
3,086,644	-				+1.1
3,086,644	-				-0.4
3,086,644	-				+1.5
3,086,651	+				-3.3
3,086,651	-				-1.0
3,086,651	-				-2.2
3,086,666	-				-3.1
3,086,667	-				+3.0
3,086,670	+				-1.6
3,086,670	+				+2.2
3,086,678	-				+1.9
3,086,689	-				+1.1
3,086,739	+				-2.5
3,086,747	-				+0.2
3,086,747	-				+1.2
3,086,747	-				+0.9
3,086,750	+				+1.0
3,086,761	+				-2.5
3,086,761	+				-0.6
3,086,761	+				-0.0
3,086,761	+				-0.5
3,086,761	+				-0.8
3,086,761	+				-1.3
3,088,098	+				+1.8
3,088,190	+				-2.7
3,088,198	-				+1.1
3,088,208	-				+0.4
3,088,208	-				+0.9
3,088,224	+				+1.5
3,088,280	+				+1.2
3,088,280	+				+0.9
3,088,288	-				-1.9
3,088,301	+				+0.1
3,088,301	+				+1.7
3,088,301	+				-0.1
3,088,307	+				+0.3
3,088,309	-				-0.4
3,088,312	+				-2.2
3,088,320	-				+2.7
3,088,320	-				-1.1
3,088,324	+				+0.1
3,088,324	+				-1.4
3,088,324	+				-2.2
3,088,332	-				-0.4
3,088,332	-				-1.5
3,088,332	-				-2.1
3,088,344	+				-0.0
3,088,368	-				-1.6
3,088,368	-				-2.2
3,088,369	-				+2.0
3,088,389	+				-2.4
3,088,389	+				-1.2
3,088,405	+		CCNA_02926	0.16	-2.4
3,088,413	-		CCNA_02926	0.21	-0.1
3,088,434	-		CCNA_02926	0.33	+2.0
3,088,437	+		CCNA_02926	0.35	+0.2
3,088,466	-		CCNA_02926	0.52	-1.8
3,088,490	-		CCNA_02926	0.66	-1.2
3,088,490	-		CCNA_02926	0.66	-1.1
3,088,550	+				+0.8
3,088,558	-				+2.1
3,088,558	-				-1.5
3,088,602	-				-0.5
3,088,616	+				-0.2
3,088,616	+				+2.1
3,088,616	+				+1.5
3,088,616	+				+0.5
3,088,616	+				-0.3
3,088,616	+				+1.2
3,088,616	+				-1.7
3,088,616	+				-1.3
3,088,624	-				+0.2
3,088,624	-				+1.5
3,088,624	-				+1.5
3,088,624	-				-1.6
3,088,624	-				-3.2
3,088,624	-				-1.7
3,088,649	+				-0.3
3,088,649	+				+0.9
3,088,657	-				-2.5
3,088,659	+				+2.8
3,088,664	+				+2.1
3,088,672	-				+0.5
3,088,778	+		CCNA_02927	0.11	-1.2
3,088,778	+		CCNA_02927	0.11	-0.3
3,088,778	+		CCNA_02927	0.11	+2.5
3,088,786	-		CCNA_02927	0.12	+0.6
3,088,786	-		CCNA_02927	0.12	+0.2
3,088,786	-		CCNA_02927	0.12	+1.1
3,088,786	-		CCNA_02927	0.12	-2.0
3,088,811	+		CCNA_02927	0.16	+0.8
3,088,815	-		CCNA_02927	0.16	-2.3
3,088,844	-		CCNA_02927	0.20	-0.0
3,088,853	+		CCNA_02927	0.21	-0.8
3,088,853	+		CCNA_02927	0.21	+2.6
3,088,861	-		CCNA_02927	0.22	-1.4
3,088,873	+		CCNA_02927	0.24	+0.2
3,088,874	+		CCNA_02927	0.24	-2.4
3,088,874	+		CCNA_02927	0.24	+0.4
3,088,881	-		CCNA_02927	0.25	-0.7
3,088,882	-		CCNA_02927	0.25	+2.1
3,088,882	-		CCNA_02927	0.25	+1.0
3,088,919	+		CCNA_02927	0.30	+0.6
3,088,929	+		CCNA_02927	0.32	+0.9
3,088,929	+		CCNA_02927	0.32	+0.8
3,088,945	-				+1.8
3,088,953	-		CCNA_02927	0.35	-1.6
3,088,954	-		CCNA_02927	0.35	-2.8
3,088,954	-		CCNA_02927	0.35	-0.4
3,088,956	+		CCNA_02927	0.35	-0.3
3,088,959	-		CCNA_02927	0.36	-0.7
3,088,964	-		CCNA_02927	0.36	-1.4
3,088,970	-		CCNA_02927	0.37	+0.2
3,089,021	-		CCNA_02927	0.44	+0.2
3,089,036	+		CCNA_02927	0.46	-1.1
3,089,038	+		CCNA_02927	0.46	-2.0
3,089,044	-		CCNA_02927	0.47	+0.3
3,089,048	+		CCNA_02927	0.48	-2.0
3,089,051	-		CCNA_02927	0.48	-1.2
3,089,058	+		CCNA_02927	0.49	-1.4
3,089,080	+		CCNA_02927	0.52	+0.6