Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01280

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
1,404,831	-		CCNA_01278	0.90	+2.6
1,404,832	-		CCNA_01278	0.90	+0.6
1,404,832	-		CCNA_01278	0.90	+0.8
1,404,857	+				-0.5
1,404,857	+				+0.7
1,404,865	-				-0.5
1,404,865	-				-1.4
1,404,875	-				+0.6
1,404,930	-				-2.5
1,404,974	+				+0.3
1,404,987	-				-0.1
1,404,992	-				-1.4
1,405,004	-				-3.4
1,405,031	+				-1.6
1,405,039	-				-1.1
1,405,046	-				-2.4
1,405,056	+				-1.1
1,405,062	+				-1.6
1,405,070	-				-2.1
1,405,115	+		CCNA_01279	0.15	-1.6
1,405,115	+		CCNA_01279	0.15	-1.1
1,405,123	-		CCNA_01279	0.16	-3.0
1,405,236	-		CCNA_01279	0.30	-1.6
1,405,248	-		CCNA_01279	0.32	-0.4
1,405,446	-		CCNA_01279	0.57	-0.7
1,405,515	-		CCNA_01279	0.66	-3.2
1,405,515	-		CCNA_01279	0.66	-2.6
1,405,526	-		CCNA_01279	0.67	-0.8
1,405,570	+		CCNA_01279	0.73	-0.4
1,405,591	-		CCNA_01279	0.76	-3.7
1,405,640	-		CCNA_01279	0.82	-2.8
1,405,659	-		CCNA_01279	0.84	-1.8
1,405,694	+		CCNA_01279	0.89	-1.8
1,405,764	-				+0.8
1,405,809	-				+0.1
1,405,809	-				-3.0
1,405,811	+				+1.5
1,405,811	+				+1.8
1,405,811	+				+0.2
1,405,819	-				+1.2
1,405,819	-				+0.9
1,405,824	-				-0.8
1,405,829	-				+0.7
1,405,870	+				-1.6
1,405,945	+		CCNA_01280	0.12	-2.9
1,405,945	+		CCNA_01280	0.12	+1.1
1,405,945	+		CCNA_01280	0.12	-1.7
1,405,988	+		CCNA_01280	0.16	+1.8
1,405,993	+		CCNA_01280	0.17	-0.9
1,406,001	-		CCNA_01280	0.17	+0.2
1,406,001	-		CCNA_01280	0.17	-3.1
1,406,001	-		CCNA_01280	0.17	+1.3
1,406,001	-		CCNA_01280	0.17	-0.4
1,406,020	+		CCNA_01280	0.19	-2.0
1,406,028	-		CCNA_01280	0.20	-0.1
1,406,038	+		CCNA_01280	0.21	-1.1
1,406,046	-		CCNA_01280	0.21	+0.5
1,406,049	+		CCNA_01280	0.22	+0.7
1,406,056	-		CCNA_01280	0.22	+1.3
1,406,062	-		CCNA_01280	0.23	-0.1
1,406,142	-		CCNA_01280	0.30	-0.1
1,406,142	-		CCNA_01280	0.30	-2.0
1,406,197	+		CCNA_01280	0.35	-2.7
1,406,205	-		CCNA_01280	0.36	-1.0
1,406,205	-		CCNA_01280	0.36	-0.1
1,406,241	-		CCNA_01280	0.39	+1.2
1,406,241	-				+0.6
1,406,241	-		CCNA_01280	0.39	-0.5
1,406,251	-		CCNA_01280	0.40	+0.8
1,406,253	-		CCNA_01280	0.41	-3.4
1,406,253	-		CCNA_01280	0.41	-1.9
1,406,302	+		CCNA_01280	0.45	-2.6
1,406,344	-		CCNA_01280	0.49	-0.9
1,406,344	-		CCNA_01280	0.49	+1.0
1,406,344	-		CCNA_01280	0.49	+1.4
1,406,388	-		CCNA_01280	0.53	+1.1
1,406,444	+		CCNA_01280	0.58	-1.0
1,406,511	-		CCNA_01280	0.64	-1.1
1,406,570	+		CCNA_01280	0.70	+1.7
1,406,573	-		CCNA_01280	0.70	+2.5
1,406,613	+		CCNA_01280	0.74	-3.0
1,406,621	-		CCNA_01280	0.74	+1.3
1,406,645	+		CCNA_01280	0.77	-2.7
1,406,674	+		CCNA_01280	0.79	+0.5
1,406,677	-		CCNA_01280	0.80	+1.2
1,406,687	-		CCNA_01280	0.80	-2.8
1,406,704	+		CCNA_01280	0.82	+1.6
1,406,752	-		CCNA_01280	0.86	-0.5
1,406,761	+		CCNA_01280	0.87	-2.0
1,406,782	+		CCNA_01280	0.89	-3.1
1,406,815	+				-0.8
1,406,815	+				-0.0
1,406,823	-				-0.7
1,406,825	+				-0.3
1,406,835	+				+1.8
1,406,835	+				-0.4
1,406,846	+				+1.6
1,406,854	-				+1.0
1,406,899	-				-0.1
1,406,926	-				-2.6
1,406,988	-				+0.3
1,406,990	+				+0.3
1,406,990	+				-3.6
1,406,998	-				-3.0
1,406,998	-				+1.9
1,406,998	-				+0.6
1,407,074	+				-1.3
1,407,075	-				-0.8
1,407,082	-				+1.3
1,407,094	-				-1.4
1,407,094	-				-0.0
1,407,099	-				-1.5
1,407,101	+				+1.7
1,407,112	+				-3.6
1,407,142	+				+1.0
1,407,142	+				-0.4
1,407,142	+				-0.4
1,407,150	-				-2.0
1,407,150	-				-1.1
1,407,169	+				-2.4
1,407,177	-				-0.4
1,407,195	+				-1.1
1,407,216	+		CCNA_01281	0.10	-2.6
1,407,219	-		CCNA_01281	0.10	-0.4
1,407,219	-		CCNA_01281	0.10	-1.5
1,407,224	-		CCNA_01281	0.11	-1.8
1,407,224	-		CCNA_01281	0.11	-2.2
1,407,224	-		CCNA_01281	0.11	+1.2
1,407,238	+		CCNA_01281	0.12	-2.3
1,407,241	-		CCNA_01281	0.12	+0.1
1,407,241	-		CCNA_01281	0.12	+1.2
1,407,284	-		CCNA_01281	0.15	-3.3
1,407,296	+		CCNA_01281	0.16	+1.7
1,407,304	-		CCNA_01281	0.16	+0.2
1,407,368	+		CCNA_01281	0.20	-1.6
1,407,383	+		CCNA_01281	0.21	+2.1
1,407,383	+		CCNA_01281	0.21	+2.7
1,407,385	+		CCNA_01281	0.22	-2.1
1,407,391	-		CCNA_01281	0.22	-0.5
1,407,391	-		CCNA_01281	0.22	-1.0
1,407,402	+		CCNA_01281	0.23	+0.9
1,407,402	+		CCNA_01281	0.23	-1.4
1,407,402	+		CCNA_01281	0.23	+0.8
1,407,402	+		CCNA_01281	0.23	-2.2
1,407,402	+		CCNA_01281	0.23	-3.6
1,407,402	+		CCNA_01281	0.23	+1.5
1,407,402	+		CCNA_01281	0.23	-1.5
1,407,402	+		CCNA_01281	0.23	-2.7
1,407,402	+		CCNA_01281	0.23	+1.8
1,407,402	+		CCNA_01281	0.23	-2.8
1,407,408	+		CCNA_01281	0.23	+0.6
1,407,410	-		CCNA_01281	0.23	+1.3
1,407,410	-		CCNA_01281	0.23	+1.2
1,407,410	-		CCNA_01281	0.23	-1.4
1,407,410	-		CCNA_01281	0.23	-3.4
1,407,410	-		CCNA_01281	0.23	+1.2
1,407,410	-		CCNA_01281	0.23	+0.5
1,407,410	-		CCNA_01281	0.23	-0.5
1,407,410	-		CCNA_01281	0.23	-1.5
1,407,410	-		CCNA_01281	0.23	+2.2
1,407,410	-		CCNA_01281	0.23	-0.4
1,407,410	-		CCNA_01281	0.23	-2.3
1,407,422	+		CCNA_01281	0.24	+1.9
1,407,431	-		CCNA_01281	0.25	+0.3
1,407,475	+		CCNA_01281	0.28	-2.2
1,407,550	+		CCNA_01281	0.33	+0.2
1,407,558	+		CCNA_01281	0.33	+0.3
1,407,559	-		CCNA_01281	0.33	+1.3
1,407,563	+		CCNA_01281	0.33	+0.9
1,407,571	-		CCNA_01281	0.34	-1.2
1,407,646	+		CCNA_01281	0.39	-2.1
1,407,654	-		CCNA_01281	0.40	-3.0
1,407,678	+		CCNA_01281	0.41	-0.5
1,407,685	-		CCNA_01281	0.42	-1.4
1,407,686	-		CCNA_01281	0.42	+0.9
1,407,709	+		CCNA_01281	0.43	-2.1
1,407,709	+		CCNA_01281	0.43	+0.6
1,407,709	+		CCNA_01281	0.43	+0.1
1,407,709	+		CCNA_01281	0.43	+1.3
1,407,717	-		CCNA_01281	0.44	-2.9
1,407,717	-		CCNA_01281	0.44	-2.8
1,407,717	-		CCNA_01281	0.44	-1.3
1,407,717	-		CCNA_01281	0.44	-1.6
1,407,717	-		CCNA_01281	0.44	-2.9
1,407,810	-		CCNA_01281	0.50	-0.5
1,407,810	-		CCNA_01281	0.50	-0.5
1,407,811	+		CCNA_01281	0.50	-1.6
1,407,829	-		CCNA_01281	0.51	-1.1
1,407,837	+		CCNA_01281	0.52	+0.9
1,407,837	+		CCNA_01281	0.52	-0.4
1,407,837	+		CCNA_01281	0.52	-2.5
1,407,845	-		CCNA_01281	0.52	-1.0
1,407,845	-		CCNA_01281	0.52	+0.5
1,407,847	+		CCNA_01281	0.53	-0.8
1,407,863	+		CCNA_01281	0.54	+1.0
1,407,873	+		CCNA_01281	0.54	-0.7