Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_30375

Experiment: Nickel (II) chloride 0.625 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_30370 and AO356_30375 are separated by 500 nucleotidesAO356_30375 and AO356_30380 are separated by 369 nucleotides AO356_30370: AO356_30370 - CoA-binding protein, at 7,088,279 to 7,090,393 _30370 AO356_30375: AO356_30375 - hypothetical protein, at 7,090,894 to 7,091,505 _30375 AO356_30380: AO356_30380 - lactonase, at 7,091,875 to 7,092,891 _30380 Position (kb) 7090 7091 7092Strain fitness (log2 ratio) -1 0 1 2at 7090.015 kb on + strand, within AO356_30370at 7090.015 kb on + strand, within AO356_30370at 7090.182 kb on - strandat 7090.248 kb on + strandat 7090.281 kb on + strandat 7090.304 kb on + strandat 7090.305 kb on - strandat 7090.387 kb on + strandat 7090.399 kb on + strandat 7090.400 kb on - strandat 7090.569 kb on + strandat 7090.569 kb on + strandat 7090.690 kb on + strandat 7090.724 kb on + strandat 7090.724 kb on + strandat 7090.724 kb on + strandat 7090.724 kb on + strandat 7090.724 kb on + strandat 7090.724 kb on + strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.725 kb on - strandat 7090.759 kb on + strandat 7091.000 kb on + strand, within AO356_30375at 7091.099 kb on - strand, within AO356_30375at 7091.099 kb on - strand, within AO356_30375at 7091.123 kb on - strand, within AO356_30375at 7091.508 kb on + strandat 7091.605 kb on - strandat 7091.622 kb on + strandat 7091.739 kb on - strandat 7091.924 kb on - strandat 7091.984 kb on + strand, within AO356_30380at 7092.128 kb on + strand, within AO356_30380at 7092.129 kb on - strand, within AO356_30380at 7092.173 kb on + strand, within AO356_30380at 7092.364 kb on + strand, within AO356_30380at 7092.364 kb on + strand, within AO356_30380at 7092.365 kb on - strand, within AO356_30380at 7092.365 kb on - strand, within AO356_30380at 7092.412 kb on + strand, within AO356_30380at 7092.413 kb on - strand, within AO356_30380at 7092.413 kb on - strand, within AO356_30380at 7092.413 kb on - strand, within AO356_30380at 7092.413 kb on - strand, within AO356_30380at 7092.416 kb on - strand, within AO356_30380

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Per-strain Table

Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM
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7,090,015 + AO356_30370 0.82 -0.7
7,090,015 + AO356_30370 0.82 -0.5
7,090,182 - -0.2
7,090,248 + +0.5
7,090,281 + -0.3
7,090,304 + -1.4
7,090,305 - +0.5
7,090,387 + +0.3
7,090,399 + +0.3
7,090,400 - -1.2
7,090,569 + +0.3
7,090,569 + -0.7
7,090,690 + -0.8
7,090,724 + -0.5
7,090,724 + -0.3
7,090,724 + -0.3
7,090,724 + -0.3
7,090,724 + -0.9
7,090,724 + -1.2
7,090,725 - +1.2
7,090,725 - -0.3
7,090,725 - +0.9
7,090,725 - +1.2
7,090,725 - -0.4
7,090,725 - +0.4
7,090,725 - -1.7
7,090,725 - +1.4
7,090,759 + -0.2
7,091,000 + AO356_30375 0.17 -0.7
7,091,099 - AO356_30375 0.33 -1.7
7,091,099 - AO356_30375 0.33 -0.4
7,091,123 - AO356_30375 0.37 -0.9
7,091,508 + -0.3
7,091,605 - -0.6
7,091,622 + +0.3
7,091,739 - -0.3
7,091,924 - -0.5
7,091,984 + AO356_30380 0.11 -1.4
7,092,128 + AO356_30380 0.25 +0.9
7,092,129 - AO356_30380 0.25 +0.7
7,092,173 + AO356_30380 0.29 +0.6
7,092,364 + AO356_30380 0.48 -0.2
7,092,364 + AO356_30380 0.48 +2.0
7,092,365 - AO356_30380 0.48 +0.6
7,092,365 - AO356_30380 0.48 -0.8
7,092,412 + AO356_30380 0.53 +0.4
7,092,413 - AO356_30380 0.53 +0.1
7,092,413 - AO356_30380 0.53 -0.3
7,092,413 - AO356_30380 0.53 +0.4
7,092,413 - AO356_30380 0.53 +1.0
7,092,416 - AO356_30380 0.53 +0.4

Or see this region's nucleotide sequence