Experiment: Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25160 and AO356_25165 are separated by 10 nucleotides AO356_25165 and AO356_25170 overlap by 7 nucleotides AO356_25170 and AO356_25175 overlap by 1 nucleotides AO356_25175 and AO356_25180 are separated by 165 nucleotides
AO356_25160: AO356_25160 - protease, at 5,693,893 to 5,694,888
_25160
AO356_25165: AO356_25165 - protease, at 5,694,899 to 5,695,789
_25165
AO356_25170: AO356_25170 - lipid carrier protein, at 5,695,783 to 5,696,253
_25170
AO356_25175: AO356_25175 - zinc-binding protein, at 5,696,253 to 5,696,627
_25175
AO356_25180: AO356_25180 - DnrE protein, at 5,696,793 to 5,697,470
_25180
Position (kb) 5695
5696
5697 Strain fitness (log2 ratio) -1
0
1 at 5694.929 kb on + strand at 5694.960 kb on - strand at 5694.995 kb on + strand, within AO356_25165 at 5695.078 kb on + strand, within AO356_25165 at 5695.403 kb on + strand, within AO356_25165 at 5695.403 kb on + strand, within AO356_25165 at 5695.599 kb on - strand, within AO356_25165 at 5695.768 kb on - strand at 5695.768 kb on - strand at 5695.985 kb on - strand, within AO356_25170 at 5695.985 kb on - strand, within AO356_25170 at 5696.101 kb on - strand, within AO356_25170 at 5696.193 kb on - strand, within AO356_25170 at 5696.283 kb on + strand at 5696.283 kb on + strand at 5696.283 kb on + strand at 5696.794 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM remove 5,694,929 + +0.7 5,694,960 - +0.2 5,694,995 + AO356_25165 0.11 -0.3 5,695,078 + AO356_25165 0.20 -0.1 5,695,403 + AO356_25165 0.57 -0.7 5,695,403 + AO356_25165 0.57 -0.1 5,695,599 - AO356_25165 0.79 -1.0 5,695,768 - +0.6 5,695,768 - -0.7 5,695,985 - AO356_25170 0.43 +0.7 5,695,985 - AO356_25170 0.43 -0.2 5,696,101 - AO356_25170 0.68 +0.2 5,696,193 - AO356_25170 0.87 +1.2 5,696,283 + +0.2 5,696,283 + -0.4 5,696,283 + +1.5 5,696,794 + -0.5
Or see this region's nucleotide sequence