Experiment: Nickel (II) chloride 0.625 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14270 and AO356_14275 are separated by 478 nucleotides AO356_14275 and AO356_14280 are separated by 199 nucleotides AO356_14280 and AO356_14285 are separated by 8 nucleotides AO356_14285 and AO356_14290 are separated by 74 nucleotides
AO356_14270: AO356_14270 - DNA primase, at 3,245,504 to 3,247,462
_14270
AO356_14275: AO356_14275 - 30S ribosomal protein S21, at 3,247,941 to 3,248,156
_14275
AO356_14280: AO356_14280 - tRNA threonylcarbamoyl adenosine modification protein TsaD, at 3,248,356 to 3,249,381
_14280
AO356_14285: AO356_14285 - glycerol-3-phosphate acyltransferase, at 3,249,390 to 3,249,959
_14285
AO356_14290: AO356_14290 - dihydroneopterin aldolase, at 3,250,034 to 3,250,387
_14290
AO356_14295: AO356_14295 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 3,250,378 to 3,250,896
_14295
Position (kb)
3248
3249
3250 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3247.490 kb on - strand at 3247.588 kb on - strand at 3247.588 kb on - strand at 3247.588 kb on - strand at 3247.588 kb on - strand at 3247.588 kb on - strand at 3247.588 kb on - strand at 3247.588 kb on - strand at 3247.615 kb on - strand at 3247.615 kb on - strand at 3247.615 kb on - strand at 3247.615 kb on - strand at 3247.615 kb on - strand at 3247.615 kb on - strand at 3247.615 kb on - strand at 3247.619 kb on - strand at 3247.619 kb on - strand at 3247.619 kb on - strand at 3247.625 kb on - strand at 3247.682 kb on - strand at 3247.872 kb on - strand at 3247.872 kb on - strand at 3247.888 kb on - strand at 3248.312 kb on + strand at 3248.360 kb on + strand at 3249.387 kb on + strand at 3249.388 kb on - strand at 3249.391 kb on + strand at 3249.392 kb on - strand at 3249.392 kb on - strand at 3249.426 kb on + strand at 3249.426 kb on + strand at 3249.426 kb on + strand at 3249.426 kb on + strand at 3249.427 kb on - strand at 3249.427 kb on - strand at 3249.565 kb on + strand, within AO356_14285 at 3249.565 kb on + strand, within AO356_14285 at 3249.565 kb on + strand, within AO356_14285 at 3249.566 kb on - strand, within AO356_14285 at 3249.673 kb on + strand, within AO356_14285 at 3249.673 kb on + strand, within AO356_14285 at 3249.674 kb on - strand, within AO356_14285 at 3249.674 kb on - strand, within AO356_14285 at 3249.674 kb on - strand, within AO356_14285 at 3249.931 kb on + strand at 3249.962 kb on + strand at 3249.962 kb on + strand at 3249.962 kb on + strand at 3249.962 kb on + strand at 3249.962 kb on + strand at 3249.962 kb on + strand at 3249.966 kb on + strand at 3249.966 kb on + strand at 3249.966 kb on + strand at 3249.966 kb on + strand at 3249.966 kb on + strand at 3249.966 kb on + strand at 3249.966 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nickel (II) chloride 0.625 mM remove 3,247,490 - -0.3 3,247,588 - -0.8 3,247,588 - -1.4 3,247,588 - -0.2 3,247,588 - +0.1 3,247,588 - -1.5 3,247,588 - -0.7 3,247,588 - -0.9 3,247,615 - -0.2 3,247,615 - -0.2 3,247,615 - -0.0 3,247,615 - +0.1 3,247,615 - -0.6 3,247,615 - -0.8 3,247,615 - -0.2 3,247,619 - -0.0 3,247,619 - -1.5 3,247,619 - -0.8 3,247,625 - +0.3 3,247,682 - -1.7 3,247,872 - +0.0 3,247,872 - -2.0 3,247,888 - -0.5 3,248,312 + -1.0 3,248,360 + +0.0 3,249,387 + +0.4 3,249,388 - -2.1 3,249,391 + +2.2 3,249,392 - -1.5 3,249,392 - +0.0 3,249,426 + +1.5 3,249,426 + +1.6 3,249,426 + +1.0 3,249,426 + +2.1 3,249,427 - -3.7 3,249,427 - -0.5 3,249,565 + AO356_14285 0.31 +2.7 3,249,565 + AO356_14285 0.31 +3.4 3,249,565 + AO356_14285 0.31 +1.7 3,249,566 - AO356_14285 0.31 -0.6 3,249,673 + AO356_14285 0.50 +1.9 3,249,673 + AO356_14285 0.50 +1.4 3,249,674 - AO356_14285 0.50 -1.3 3,249,674 - AO356_14285 0.50 -0.9 3,249,674 - AO356_14285 0.50 -0.1 3,249,931 + +1.2 3,249,962 + +1.7 3,249,962 + +1.3 3,249,962 + +1.6 3,249,962 + +0.9 3,249,962 + +1.5 3,249,962 + +1.6 3,249,966 + +1.3 3,249,966 + +2.1 3,249,966 + +2.5 3,249,966 + +0.8 3,249,966 + +1.9 3,249,966 + +1.8 3,249,966 + +0.9
Or see this region's nucleotide sequence