Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS28010 and RR42_RS28015 are separated by 108 nucleotides RR42_RS28015 and RR42_RS28020 are separated by 59 nucleotides RR42_RS28020 and RR42_RS28025 are separated by 85 nucleotides
RR42_RS28010: RR42_RS28010 - alkylphosphonate ABC transporter substrate-binding protein, at 1,646,115 to 1,647,107
_RS28010
RR42_RS28015: RR42_RS28015 - phosphonate ABC transporter permease, at 1,647,216 to 1,648,007
_RS28015
RR42_RS28020: RR42_RS28020 - phosphohydrolase, at 1,648,067 to 1,648,603
_RS28020
RR42_RS28025: RR42_RS28025 - GNAT family acetyltransferase, at 1,648,689 to 1,649,144
_RS28025
Position (kb)
1647
1648
1649 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1646.216 kb on + strand, within RR42_RS28010 at 1646.323 kb on - strand, within RR42_RS28010 at 1646.592 kb on + strand, within RR42_RS28010 at 1646.592 kb on + strand, within RR42_RS28010 at 1646.592 kb on + strand, within RR42_RS28010 at 1646.593 kb on - strand, within RR42_RS28010 at 1646.593 kb on - strand, within RR42_RS28010 at 1646.757 kb on + strand, within RR42_RS28010 at 1646.767 kb on + strand, within RR42_RS28010 at 1646.871 kb on + strand, within RR42_RS28010 at 1646.872 kb on - strand, within RR42_RS28010 at 1646.925 kb on + strand, within RR42_RS28010 at 1646.925 kb on + strand, within RR42_RS28010 at 1646.926 kb on - strand, within RR42_RS28010 at 1646.926 kb on - strand, within RR42_RS28010 at 1646.926 kb on - strand, within RR42_RS28010 at 1647.167 kb on - strand at 1647.178 kb on + strand at 1647.519 kb on - strand, within RR42_RS28015 at 1647.538 kb on - strand, within RR42_RS28015 at 1647.605 kb on + strand, within RR42_RS28015 at 1647.623 kb on - strand, within RR42_RS28015 at 1647.768 kb on + strand, within RR42_RS28015 at 1647.807 kb on + strand, within RR42_RS28015 at 1647.808 kb on - strand, within RR42_RS28015 at 1647.808 kb on - strand, within RR42_RS28015 at 1647.853 kb on + strand, within RR42_RS28015 at 1648.121 kb on + strand, within RR42_RS28020 at 1648.122 kb on - strand, within RR42_RS28020 at 1648.122 kb on - strand, within RR42_RS28020 at 1648.361 kb on + strand, within RR42_RS28020 at 1648.386 kb on - strand, within RR42_RS28020 at 1648.512 kb on - strand, within RR42_RS28020 at 1648.818 kb on + strand, within RR42_RS28025 at 1648.818 kb on + strand, within RR42_RS28025 at 1648.818 kb on + strand, within RR42_RS28025 at 1648.819 kb on - strand, within RR42_RS28025 at 1648.822 kb on - strand, within RR42_RS28025
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 1,646,216 + RR42_RS28010 0.10 +0.4 1,646,323 - RR42_RS28010 0.21 +0.6 1,646,592 + RR42_RS28010 0.48 -1.5 1,646,592 + RR42_RS28010 0.48 +0.6 1,646,592 + RR42_RS28010 0.48 -1.8 1,646,593 - RR42_RS28010 0.48 -0.8 1,646,593 - RR42_RS28010 0.48 -0.6 1,646,757 + RR42_RS28010 0.65 +0.8 1,646,767 + RR42_RS28010 0.66 +1.4 1,646,871 + RR42_RS28010 0.76 -0.2 1,646,872 - RR42_RS28010 0.76 +0.3 1,646,925 + RR42_RS28010 0.82 -0.6 1,646,925 + RR42_RS28010 0.82 -0.2 1,646,926 - RR42_RS28010 0.82 +0.8 1,646,926 - RR42_RS28010 0.82 +1.1 1,646,926 - RR42_RS28010 0.82 -0.4 1,647,167 - -0.8 1,647,178 + +0.5 1,647,519 - RR42_RS28015 0.38 +0.5 1,647,538 - RR42_RS28015 0.41 -1.6 1,647,605 + RR42_RS28015 0.49 +0.8 1,647,623 - RR42_RS28015 0.51 +0.4 1,647,768 + RR42_RS28015 0.70 +2.0 1,647,807 + RR42_RS28015 0.75 +0.8 1,647,808 - RR42_RS28015 0.75 +0.3 1,647,808 - RR42_RS28015 0.75 +1.1 1,647,853 + RR42_RS28015 0.80 -1.8 1,648,121 + RR42_RS28020 0.10 +0.3 1,648,122 - RR42_RS28020 0.10 +0.2 1,648,122 - RR42_RS28020 0.10 -0.1 1,648,361 + RR42_RS28020 0.55 -1.6 1,648,386 - RR42_RS28020 0.59 -0.3 1,648,512 - RR42_RS28020 0.83 +1.1 1,648,818 + RR42_RS28025 0.28 -0.5 1,648,818 + RR42_RS28025 0.28 -0.1 1,648,818 + RR42_RS28025 0.28 -0.1 1,648,819 - RR42_RS28025 0.29 +0.1 1,648,822 - RR42_RS28025 0.29 +0.6
Or see this region's nucleotide sequence