Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01897 and H281DRAFT_01898 are separated by 131 nucleotides H281DRAFT_01898 and H281DRAFT_01899 are separated by 117 nucleotides H281DRAFT_01899 and H281DRAFT_01900 are separated by 115 nucleotides
H281DRAFT_01897: H281DRAFT_01897 - Acetyl esterase/lipase, at 10,102 to 11,064
_01897
H281DRAFT_01898: H281DRAFT_01898 - CHRD domain-containing protein, at 11,196 to 11,630
_01898
H281DRAFT_01899: H281DRAFT_01899 - hypothetical protein, at 11,748 to 11,867
_01899
H281DRAFT_01900: H281DRAFT_01900 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 11,983 to 13,323
_01900
Position (kb)
11
12 Strain fitness (log2 ratio)
-1
0
1 at 10.391 kb on + strand, within H281DRAFT_01897 at 10.392 kb on - strand, within H281DRAFT_01897 at 10.410 kb on + strand, within H281DRAFT_01897 at 10.411 kb on - strand, within H281DRAFT_01897 at 10.411 kb on - strand, within H281DRAFT_01897 at 10.440 kb on + strand, within H281DRAFT_01897 at 10.658 kb on + strand, within H281DRAFT_01897 at 10.659 kb on - strand, within H281DRAFT_01897 at 10.721 kb on + strand, within H281DRAFT_01897 at 10.802 kb on + strand, within H281DRAFT_01897 at 10.802 kb on + strand, within H281DRAFT_01897 at 10.802 kb on + strand, within H281DRAFT_01897 at 10.803 kb on - strand, within H281DRAFT_01897 at 10.823 kb on + strand, within H281DRAFT_01897 at 10.823 kb on + strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 11.099 kb on + strand at 11.099 kb on + strand at 11.099 kb on + strand at 11.099 kb on + strand at 11.100 kb on - strand at 11.100 kb on - strand at 11.197 kb on + strand at 11.197 kb on + strand at 11.198 kb on - strand at 11.198 kb on - strand at 11.198 kb on - strand at 11.249 kb on + strand at 11.263 kb on + strand, within H281DRAFT_01898 at 11.263 kb on + strand at 11.264 kb on - strand, within H281DRAFT_01898 at 11.289 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.435 kb on - strand, within H281DRAFT_01898 at 11.505 kb on + strand, within H281DRAFT_01898 at 11.506 kb on - strand, within H281DRAFT_01898 at 11.506 kb on - strand, within H281DRAFT_01898 at 11.506 kb on - strand, within H281DRAFT_01898 at 11.548 kb on - strand, within H281DRAFT_01898 at 11.624 kb on + strand at 11.644 kb on + strand at 11.692 kb on + strand at 11.692 kb on + strand at 11.692 kb on + strand at 11.692 kb on + strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.695 kb on + strand at 11.695 kb on + strand at 11.695 kb on + strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.741 kb on + strand at 11.742 kb on - strand at 11.775 kb on - strand, within H281DRAFT_01899 at 11.793 kb on + strand, within H281DRAFT_01899 at 11.834 kb on + strand, within H281DRAFT_01899 at 11.835 kb on - strand, within H281DRAFT_01899 at 11.835 kb on - strand, within H281DRAFT_01899 at 12.057 kb on + strand at 12.087 kb on + strand at 12.373 kb on - strand, within H281DRAFT_01900 at 12.373 kb on - strand, within H281DRAFT_01900 at 12.425 kb on + strand, within H281DRAFT_01900 at 12.597 kb on - strand, within H281DRAFT_01900 at 12.604 kb on + strand, within H281DRAFT_01900 at 12.604 kb on + strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.615 kb on + strand, within H281DRAFT_01900 at 12.615 kb on + strand, within H281DRAFT_01900 at 12.616 kb on - strand, within H281DRAFT_01900 at 12.616 kb on - strand, within H281DRAFT_01900
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 10,391 + H281DRAFT_01897 0.30 +0.2 10,392 - H281DRAFT_01897 0.30 -0.1 10,410 + H281DRAFT_01897 0.32 -0.1 10,411 - H281DRAFT_01897 0.32 +0.7 10,411 - H281DRAFT_01897 0.32 +0.3 10,440 + H281DRAFT_01897 0.35 +0.5 10,658 + H281DRAFT_01897 0.58 +1.5 10,659 - H281DRAFT_01897 0.58 +0.7 10,721 + H281DRAFT_01897 0.64 -1.2 10,802 + H281DRAFT_01897 0.73 +0.4 10,802 + H281DRAFT_01897 0.73 -1.4 10,802 + H281DRAFT_01897 0.73 +0.2 10,803 - H281DRAFT_01897 0.73 +0.1 10,823 + H281DRAFT_01897 0.75 -0.1 10,823 + H281DRAFT_01897 0.75 +1.0 10,824 - H281DRAFT_01897 0.75 +1.2 10,824 - H281DRAFT_01897 0.75 +0.4 10,824 - H281DRAFT_01897 0.75 -0.4 10,824 - H281DRAFT_01897 0.75 +0.3 11,099 + +0.7 11,099 + +0.2 11,099 + +0.1 11,099 + -0.4 11,100 - -0.2 11,100 - -0.7 11,197 + -0.3 11,197 + -0.4 11,198 - -0.5 11,198 - +0.2 11,198 - -0.2 11,249 + -0.4 11,263 + H281DRAFT_01898 0.15 +0.8 11,263 + +1.2 11,264 - H281DRAFT_01898 0.16 +1.0 11,289 + H281DRAFT_01898 0.21 -0.4 11,434 + H281DRAFT_01898 0.55 -0.4 11,434 + H281DRAFT_01898 0.55 +0.0 11,434 + H281DRAFT_01898 0.55 +1.4 11,434 + H281DRAFT_01898 0.55 +0.5 11,435 - H281DRAFT_01898 0.55 -0.1 11,505 + H281DRAFT_01898 0.71 +0.5 11,506 - H281DRAFT_01898 0.71 +0.2 11,506 - H281DRAFT_01898 0.71 -0.3 11,506 - H281DRAFT_01898 0.71 +0.7 11,548 - H281DRAFT_01898 0.81 +0.8 11,624 + +0.3 11,644 + -0.5 11,692 + -0.4 11,692 + -0.5 11,692 + +0.3 11,692 + +0.3 11,693 - -0.1 11,693 - -0.0 11,693 - +0.5 11,693 - +0.6 11,693 - +0.1 11,695 + +0.8 11,695 + +0.3 11,695 + -0.1 11,696 - -0.5 11,696 - +0.1 11,696 - +0.9 11,696 - +0.3 11,696 - +0.6 11,741 + +0.1 11,742 - +0.6 11,775 - H281DRAFT_01899 0.23 -0.3 11,793 + H281DRAFT_01899 0.38 -0.6 11,834 + H281DRAFT_01899 0.72 +0.6 11,835 - H281DRAFT_01899 0.72 -1.4 11,835 - H281DRAFT_01899 0.72 -0.7 12,057 + -0.3 12,087 + -0.0 12,373 - H281DRAFT_01900 0.29 +1.6 12,373 - H281DRAFT_01900 0.29 -0.4 12,425 + H281DRAFT_01900 0.33 +0.1 12,597 - H281DRAFT_01900 0.46 +1.0 12,604 + H281DRAFT_01900 0.46 +0.3 12,604 + H281DRAFT_01900 0.46 +0.1 12,605 - H281DRAFT_01900 0.46 +0.5 12,605 - H281DRAFT_01900 0.46 +0.1 12,605 - H281DRAFT_01900 0.46 -0.1 12,615 + H281DRAFT_01900 0.47 -0.1 12,615 + H281DRAFT_01900 0.47 +0.6 12,616 - H281DRAFT_01900 0.47 +0.1 12,616 - H281DRAFT_01900 0.47 -0.4
Or see this region's nucleotide sequence