Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00639 and H281DRAFT_00640 are separated by 123 nucleotides H281DRAFT_00640 and H281DRAFT_00641 are separated by 207 nucleotides
H281DRAFT_00639: H281DRAFT_00639 - CubicO group peptidase, beta-lactamase class C family, at 715,842 to 717,710
_00639
H281DRAFT_00640: H281DRAFT_00640 - putative regulator of deoxyribonate oxidation <small>(from data)</small>, at 717,834 to 718,859
_00640
H281DRAFT_00641: H281DRAFT_00641 - 2-deoxy-3-keto-D-ribonate cleavage enzyme <small>(from data)</small>, at 719,067 to 720,005
_00641
Position (kb) 717
718
719 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 716.899 kb on - strand, within H281DRAFT_00639 at 717.106 kb on - strand, within H281DRAFT_00639 at 717.351 kb on + strand, within H281DRAFT_00639 at 717.352 kb on - strand, within H281DRAFT_00639 at 717.358 kb on - strand, within H281DRAFT_00639 at 717.531 kb on + strand at 717.538 kb on + strand at 717.561 kb on + strand at 717.568 kb on + strand at 717.569 kb on - strand at 717.794 kb on - strand at 717.913 kb on - strand at 718.243 kb on + strand, within H281DRAFT_00640 at 718.244 kb on - strand, within H281DRAFT_00640 at 718.244 kb on - strand, within H281DRAFT_00640 at 718.358 kb on + strand, within H281DRAFT_00640 at 718.359 kb on - strand, within H281DRAFT_00640 at 718.532 kb on - strand, within H281DRAFT_00640 at 718.591 kb on + strand, within H281DRAFT_00640 at 718.826 kb on + strand at 718.827 kb on - strand at 718.827 kb on - strand at 718.936 kb on - strand at 719.061 kb on - strand at 719.343 kb on - strand, within H281DRAFT_00641 at 719.481 kb on + strand, within H281DRAFT_00641 at 719.586 kb on + strand, within H281DRAFT_00641 at 719.605 kb on - strand, within H281DRAFT_00641 at 719.640 kb on - strand, within H281DRAFT_00641 at 719.856 kb on + strand, within H281DRAFT_00641 at 719.857 kb on - strand, within H281DRAFT_00641
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 716,899 - H281DRAFT_00639 0.57 -1.7 717,106 - H281DRAFT_00639 0.68 +0.2 717,351 + H281DRAFT_00639 0.81 -0.0 717,352 - H281DRAFT_00639 0.81 +0.4 717,358 - H281DRAFT_00639 0.81 -0.8 717,531 + +0.8 717,538 + +1.3 717,561 + +0.6 717,568 + +0.3 717,569 - -0.0 717,794 - +0.6 717,913 - -2.5 718,243 + H281DRAFT_00640 0.40 -1.3 718,244 - H281DRAFT_00640 0.40 -1.2 718,244 - H281DRAFT_00640 0.40 -0.7 718,358 + H281DRAFT_00640 0.51 -1.2 718,359 - H281DRAFT_00640 0.51 -3.4 718,532 - H281DRAFT_00640 0.68 -2.1 718,591 + H281DRAFT_00640 0.74 -0.2 718,826 + +0.8 718,827 - -3.0 718,827 - -1.9 718,936 - -3.0 719,061 - -2.8 719,343 - H281DRAFT_00641 0.29 -2.8 719,481 + H281DRAFT_00641 0.44 -1.8 719,586 + H281DRAFT_00641 0.55 -3.4 719,605 - H281DRAFT_00641 0.57 -1.4 719,640 - H281DRAFT_00641 0.61 -2.1 719,856 + H281DRAFT_00641 0.84 -2.3 719,857 - H281DRAFT_00641 0.84 -2.8
Or see this region's nucleotide sequence