Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00467

Experiment: 2-Deoxy-D-Ribose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00466 and H281DRAFT_00467 are separated by 85 nucleotidesH281DRAFT_00467 and H281DRAFT_00468 are separated by 208 nucleotides H281DRAFT_00466: H281DRAFT_00466 - pyruvate dehydrogenase E1 component, at 521,176 to 523,872 _00466 H281DRAFT_00467: H281DRAFT_00467 - pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase), at 523,958 to 525,646 _00467 H281DRAFT_00468: H281DRAFT_00468 - dihydrolipoamide dehydrogenase, at 525,855 to 527,627 _00468 Position (kb) 523 524 525 526Strain fitness (log2 ratio) -1 0 1at 523.870 kb on + strandat 524.000 kb on + strandat 525.697 kb on + strandat 525.697 kb on + strandat 525.697 kb on + strandat 525.697 kb on + strandat 525.838 kb on + strandat 525.838 kb on + strandat 525.839 kb on - strandat 525.854 kb on + strandat 525.855 kb on - strandat 525.855 kb on - strandat 525.855 kb on - strandat 525.871 kb on + strandat 526.359 kb on - strand, within H281DRAFT_00468

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C)
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523,870 + -0.8
524,000 + -0.2
525,697 + +0.9
525,697 + +0.2
525,697 + +0.1
525,697 + -0.2
525,838 + -0.6
525,838 + -0.2
525,839 - +1.0
525,854 + -0.1
525,855 - +0.4
525,855 - -1.4
525,855 - -1.2
525,871 + -0.1
526,359 - H281DRAFT_00468 0.28 -0.7

Or see this region's nucleotide sequence