Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00108 and H281DRAFT_00109 are separated by 30 nucleotides H281DRAFT_00109 and H281DRAFT_00110 are separated by 62 nucleotides H281DRAFT_00110 and H281DRAFT_00111 are separated by 15 nucleotides
H281DRAFT_00108: H281DRAFT_00108 - Predicted dehydrogenase, at 113,024 to 114,175
_00108
H281DRAFT_00109: H281DRAFT_00109 - hypothetical protein, at 114,206 to 114,466
_00109
H281DRAFT_00110: H281DRAFT_00110 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 114,529 to 117,723
_00110
H281DRAFT_00111: H281DRAFT_00111 - RND family efflux transporter, MFP subunit, at 117,739 to 118,962
_00111
Position (kb) 114
115
116
117
118 Strain fitness (log2 ratio) -1
0
1 at 113.772 kb on + strand, within H281DRAFT_00108 at 113.773 kb on - strand, within H281DRAFT_00108 at 113.811 kb on + strand, within H281DRAFT_00108 at 114.005 kb on + strand, within H281DRAFT_00108 at 114.008 kb on - strand, within H281DRAFT_00108 at 114.285 kb on + strand, within H281DRAFT_00109 at 114.286 kb on - strand, within H281DRAFT_00109 at 114.286 kb on - strand, within H281DRAFT_00109 at 114.495 kb on + strand at 114.630 kb on + strand at 114.744 kb on + strand at 114.745 kb on - strand at 114.745 kb on - strand at 114.973 kb on - strand, within H281DRAFT_00110 at 114.973 kb on - strand, within H281DRAFT_00110 at 115.041 kb on - strand, within H281DRAFT_00110 at 115.677 kb on + strand, within H281DRAFT_00110 at 115.677 kb on + strand, within H281DRAFT_00110 at 115.677 kb on + strand, within H281DRAFT_00110 at 115.678 kb on - strand, within H281DRAFT_00110 at 115.859 kb on + strand, within H281DRAFT_00110 at 115.859 kb on + strand, within H281DRAFT_00110 at 115.859 kb on + strand, within H281DRAFT_00110 at 115.860 kb on - strand, within H281DRAFT_00110 at 115.865 kb on + strand, within H281DRAFT_00110 at 115.866 kb on - strand, within H281DRAFT_00110 at 116.102 kb on + strand, within H281DRAFT_00110 at 116.102 kb on + strand, within H281DRAFT_00110 at 116.175 kb on - strand, within H281DRAFT_00110 at 116.444 kb on - strand, within H281DRAFT_00110 at 116.524 kb on - strand, within H281DRAFT_00110 at 116.552 kb on + strand, within H281DRAFT_00110 at 116.553 kb on - strand, within H281DRAFT_00110 at 117.318 kb on + strand at 117.318 kb on + strand, within H281DRAFT_00110 at 117.319 kb on - strand, within H281DRAFT_00110 at 117.340 kb on + strand, within H281DRAFT_00110 at 117.653 kb on - strand at 117.653 kb on - strand at 117.849 kb on + strand at 117.850 kb on - strand at 117.850 kb on - strand at 117.850 kb on - strand at 118.013 kb on + strand, within H281DRAFT_00111 at 118.021 kb on - strand, within H281DRAFT_00111 at 118.092 kb on + strand, within H281DRAFT_00111 at 118.093 kb on - strand, within H281DRAFT_00111 at 118.151 kb on + strand, within H281DRAFT_00111 at 118.151 kb on + strand, within H281DRAFT_00111 at 118.152 kb on - strand, within H281DRAFT_00111 at 118.152 kb on - strand, within H281DRAFT_00111 at 118.213 kb on + strand, within H281DRAFT_00111 at 118.487 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111 at 118.634 kb on + strand, within H281DRAFT_00111
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 113,772 + H281DRAFT_00108 0.65 +0.1 113,773 - H281DRAFT_00108 0.65 -0.1 113,811 + H281DRAFT_00108 0.68 +0.3 114,005 + H281DRAFT_00108 0.85 +0.9 114,008 - H281DRAFT_00108 0.85 +0.1 114,285 + H281DRAFT_00109 0.30 +1.0 114,286 - H281DRAFT_00109 0.31 +0.4 114,286 - H281DRAFT_00109 0.31 -1.4 114,495 + -0.1 114,630 + -0.1 114,744 + +0.0 114,745 - +0.3 114,745 - -0.2 114,973 - H281DRAFT_00110 0.14 -0.7 114,973 - H281DRAFT_00110 0.14 -0.4 115,041 - H281DRAFT_00110 0.16 +1.3 115,677 + H281DRAFT_00110 0.36 -0.7 115,677 + H281DRAFT_00110 0.36 +0.3 115,677 + H281DRAFT_00110 0.36 -1.0 115,678 - H281DRAFT_00110 0.36 -0.0 115,859 + H281DRAFT_00110 0.42 -0.1 115,859 + H281DRAFT_00110 0.42 -1.7 115,859 + H281DRAFT_00110 0.42 -0.0 115,860 - H281DRAFT_00110 0.42 +0.0 115,865 + H281DRAFT_00110 0.42 +1.0 115,866 - H281DRAFT_00110 0.42 +0.8 116,102 + H281DRAFT_00110 0.49 +0.2 116,102 + H281DRAFT_00110 0.49 -0.8 116,175 - H281DRAFT_00110 0.52 +0.7 116,444 - H281DRAFT_00110 0.60 +0.2 116,524 - H281DRAFT_00110 0.62 -1.7 116,552 + H281DRAFT_00110 0.63 +0.9 116,553 - H281DRAFT_00110 0.63 -0.8 117,318 + +1.6 117,318 + H281DRAFT_00110 0.87 +0.2 117,319 - H281DRAFT_00110 0.87 +0.1 117,340 + H281DRAFT_00110 0.88 +0.4 117,653 - -0.1 117,653 - +0.4 117,849 + -0.1 117,850 - +0.1 117,850 - +0.2 117,850 - -0.3 118,013 + H281DRAFT_00111 0.22 -1.7 118,021 - H281DRAFT_00111 0.23 -0.2 118,092 + H281DRAFT_00111 0.29 -0.5 118,093 - H281DRAFT_00111 0.29 +0.5 118,151 + H281DRAFT_00111 0.34 -0.3 118,151 + H281DRAFT_00111 0.34 -0.1 118,152 - H281DRAFT_00111 0.34 +0.5 118,152 - H281DRAFT_00111 0.34 +1.4 118,213 + H281DRAFT_00111 0.39 -0.5 118,487 + H281DRAFT_00111 0.61 -0.4 118,634 + H281DRAFT_00111 0.73 +0.3 118,634 + H281DRAFT_00111 0.73 +0.2
Or see this region's nucleotide sequence