Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2946

Experiment: 1-ethyl-3-methylimidazolium chloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 10 mM
3,056,805	+		Ga0059261_2945	0.34	-0.1
3,056,806	-		Ga0059261_2945	0.34	+0.2
3,056,806	-		Ga0059261_2945	0.34	+0.5
3,056,887	-		Ga0059261_2945	0.40	-1.0
3,057,084	+		Ga0059261_2945	0.54	-0.4
3,057,090	+		Ga0059261_2945	0.55	-0.1
3,057,091	-		Ga0059261_2945	0.55	-1.1
3,057,168	+		Ga0059261_2945	0.60	+0.1
3,057,168	+		Ga0059261_2945	0.60	+0.5
3,057,168	+		Ga0059261_2945	0.60	-1.0
3,057,168	+		Ga0059261_2945	0.60	-0.1
3,057,169	-		Ga0059261_2945	0.60	+1.0
3,057,169	-				-0.1
3,057,179	+		Ga0059261_2945	0.61	+0.1
3,057,179	+		Ga0059261_2945	0.61	+0.7
3,057,180	-		Ga0059261_2945	0.61	-0.1
3,057,267	+		Ga0059261_2945	0.67	-0.1
3,057,267	+				+0.5
3,057,267	+		Ga0059261_2945	0.67	+0.0
3,057,267	+		Ga0059261_2945	0.67	+0.3
3,057,267	+		Ga0059261_2945	0.67	+0.6
3,057,267	+		Ga0059261_2945	0.67	-0.2
3,057,267	+		Ga0059261_2945	0.67	+0.7
3,057,267	+		Ga0059261_2945	0.67	-0.1
3,057,267	+		Ga0059261_2945	0.67	+0.1
3,057,267	+		Ga0059261_2945	0.67	-1.3
3,057,268	-		Ga0059261_2945	0.67	-0.2
3,057,268	-		Ga0059261_2945	0.67	-0.3
3,057,268	-		Ga0059261_2945	0.67	-0.7
3,057,268	-		Ga0059261_2945	0.67	+0.7
3,057,268	-		Ga0059261_2945	0.67	-0.9
3,057,268	-		Ga0059261_2945	0.67	-0.1
3,057,268	-		Ga0059261_2945	0.67	-0.0
3,057,268	-		Ga0059261_2945	0.67	-0.3
3,057,268	-		Ga0059261_2945	0.67	-0.4
3,057,268	-		Ga0059261_2945	0.67	-0.1
3,057,268	-		Ga0059261_2945	0.67	+0.2
3,057,268	-		Ga0059261_2945	0.67	-0.7
3,057,269	+		Ga0059261_2945	0.67	+0.7
3,057,269	+		Ga0059261_2945	0.67	+0.1
3,057,270	-		Ga0059261_2945	0.67	-0.8
3,057,270	-		Ga0059261_2945	0.67	-0.2
3,057,270	-		Ga0059261_2945	0.67	+0.1
3,057,270	-		Ga0059261_2945	0.67	-0.1
3,057,309	+		Ga0059261_2945	0.70	-1.5
3,057,309	+		Ga0059261_2945	0.70	-0.2
3,057,309	+		Ga0059261_2945	0.70	-0.1
3,057,310	-		Ga0059261_2945	0.70	-0.9
3,057,310	-		Ga0059261_2945	0.70	+0.5
3,057,310	-		Ga0059261_2945	0.70	-0.4
3,057,310	-		Ga0059261_2945	0.70	+1.5
3,057,310	-		Ga0059261_2945	0.70	-0.1
3,057,310	-		Ga0059261_2945	0.70	-0.5
3,057,330	+		Ga0059261_2945	0.72	+0.2
3,057,331	-		Ga0059261_2945	0.72	+0.0
3,057,331	-		Ga0059261_2945	0.72	+0.2
3,057,390	+		Ga0059261_2945	0.76	+0.7
3,057,390	+		Ga0059261_2945	0.76	-0.3
3,057,390	+		Ga0059261_2945	0.76	+1.3
3,057,390	+		Ga0059261_2945	0.76	+1.2
3,057,390	+		Ga0059261_2945	0.76	-1.1
3,057,390	+		Ga0059261_2945	0.76	+0.5
3,057,390	+		Ga0059261_2945	0.76	-0.6
3,057,390	+		Ga0059261_2945	0.76	+0.1
3,057,391	-		Ga0059261_2945	0.76	-0.3
3,057,391	-		Ga0059261_2945	0.76	-0.3
3,057,391	-		Ga0059261_2945	0.76	-0.1
3,057,391	-		Ga0059261_2945	0.76	+0.9
3,057,391	-		Ga0059261_2945	0.76	+1.1
3,057,391	-		Ga0059261_2945	0.76	+0.5
3,057,391	-		Ga0059261_2945	0.76	-0.8
3,057,391	-		Ga0059261_2945	0.76	-0.2
3,057,391	-		Ga0059261_2945	0.76	-0.6
3,057,391	-		Ga0059261_2945	0.76	+0.5
3,057,391	-		Ga0059261_2945	0.76	+1.0
3,057,480	+		Ga0059261_2945	0.82	-0.7
3,057,480	+		Ga0059261_2945	0.82	-0.6
3,057,481	-		Ga0059261_2945	0.82	-0.2
3,057,499	+		Ga0059261_2945	0.84	+0.3
3,057,507	+		Ga0059261_2945	0.84	+0.0
3,057,507	+		Ga0059261_2945	0.84	-0.1
3,057,508	-		Ga0059261_2945	0.84	-1.3
3,057,540	+		Ga0059261_2945	0.87	-0.2
3,057,541	-		Ga0059261_2945	0.87	-0.9
3,057,638	+				-0.6
3,057,638	+				-0.1
3,057,638	+				+0.5
3,057,638	+				+0.1
3,057,639	-				-0.5
3,057,639	-				+0.5
3,057,639	-				+0.7
3,057,726	+				-0.3
3,057,819	+		Ga0059261_2946	0.10	+0.6
3,057,819	+		Ga0059261_2946	0.10	-0.5
3,057,819	+		Ga0059261_2946	0.10	-0.6
3,057,819	+				-0.1
3,057,820	-		Ga0059261_2946	0.10	+0.1
3,057,820	-		Ga0059261_2946	0.10	-0.4
3,057,820	-		Ga0059261_2946	0.10	-0.3
3,057,858	+		Ga0059261_2946	0.15	-0.9
3,057,858	+				+1.1
3,057,858	+		Ga0059261_2946	0.15	+0.5
3,057,858	+		Ga0059261_2946	0.15	-1.1
3,057,859	-		Ga0059261_2946	0.15	+0.9
3,057,859	-		Ga0059261_2946	0.15	+0.6
3,057,865	-		Ga0059261_2946	0.15	+0.6
3,057,929	+		Ga0059261_2946	0.23	+0.9
3,057,929	+		Ga0059261_2946	0.23	+0.2
3,057,930	-		Ga0059261_2946	0.23	+0.1
3,058,047	+		Ga0059261_2946	0.36	+0.5
3,058,047	+		Ga0059261_2946	0.36	-1.1
3,058,047	+				+0.7
3,058,047	+		Ga0059261_2946	0.36	-0.6
3,058,047	+		Ga0059261_2946	0.36	+0.1
3,058,047	+		Ga0059261_2946	0.36	-0.2
3,058,048	-				-0.9
3,058,048	-		Ga0059261_2946	0.36	-0.4
3,058,048	-		Ga0059261_2946	0.36	-0.3
3,058,048	-		Ga0059261_2946	0.36	+0.1
3,058,048	-		Ga0059261_2946	0.36	-0.2
3,058,048	-				-0.1
3,058,286	-		Ga0059261_2946	0.62	+0.5
3,058,286	-		Ga0059261_2946	0.62	-0.1
3,058,333	+		Ga0059261_2946	0.67	+0.1
3,058,333	+		Ga0059261_2946	0.67	-0.3
3,058,333	+		Ga0059261_2946	0.67	-1.9
3,058,334	-		Ga0059261_2946	0.67	-0.1
3,058,334	-		Ga0059261_2946	0.67	+0.5
3,058,334	-		Ga0059261_2946	0.67	-1.0
3,058,334	-		Ga0059261_2946	0.67	-0.1
3,058,334	-		Ga0059261_2946	0.67	-0.5
3,058,689	+				-3.3
3,058,689	+				+0.1
3,058,689	+				+0.1
3,058,689	+				-0.0
3,058,689	+				-1.6
3,058,689	+				+0.1
3,058,689	+				-0.8
3,058,690	-				+1.5
3,058,703	+				+0.0
3,058,794	+				-0.5
3,058,862	+		Ga0059261_2947	0.10	+0.3
3,058,879	+		Ga0059261_2947	0.12	+0.3
3,058,880	-		Ga0059261_2947	0.12	+1.1
3,058,892	+		Ga0059261_2947	0.13	+0.5
3,058,892	+		Ga0059261_2947	0.13	-0.4
3,058,892	+		Ga0059261_2947	0.13	+1.2
3,058,892	+		Ga0059261_2947	0.13	+0.1
3,058,892	+		Ga0059261_2947	0.13	-1.1
3,058,892	+		Ga0059261_2947	0.13	+0.3
3,058,892	+		Ga0059261_2947	0.13	+1.1
3,058,893	-		Ga0059261_2947	0.13	-0.3
3,058,893	-		Ga0059261_2947	0.13	-0.2
3,058,893	-		Ga0059261_2947	0.13	+2.1
3,058,893	-		Ga0059261_2947	0.13	+0.0
3,058,893	-		Ga0059261_2947	0.13	-0.2
3,058,973	+		Ga0059261_2947	0.20	-0.3
3,058,974	-		Ga0059261_2947	0.20	+0.5
3,059,321	+		Ga0059261_2947	0.51	-0.5
3,059,321	+		Ga0059261_2947	0.51	-0.6
3,059,322	-		Ga0059261_2947	0.51	+0.4
3,059,322	-		Ga0059261_2947	0.51	-0.1
3,059,322	-		Ga0059261_2947	0.51	+1.0
3,059,322	-		Ga0059261_2947	0.51	-0.5
3,059,322	-		Ga0059261_2947	0.51	-0.2
3,059,322	-		Ga0059261_2947	0.51	+0.3
3,059,501	+		Ga0059261_2947	0.66	+0.4
3,059,501	+		Ga0059261_2947	0.66	-0.1
3,059,501	+		Ga0059261_2947	0.66	-0.2
3,059,501	+		Ga0059261_2947	0.66	-0.2
3,059,501	+		Ga0059261_2947	0.66	-0.1
3,059,501	+		Ga0059261_2947	0.66	-1.2
3,059,502	-		Ga0059261_2947	0.66	+0.1
3,059,502	-		Ga0059261_2947	0.66	+0.1
3,059,502	-		Ga0059261_2947	0.66	+2.0
3,059,502	-		Ga0059261_2947	0.66	-1.1
3,059,502	-		Ga0059261_2947	0.66	+1.0
3,059,502	-		Ga0059261_2947	0.66	+0.2
3,059,502	-		Ga0059261_2947	0.66	-0.0
3,059,585	+		Ga0059261_2947	0.74	-0.1
3,059,585	+		Ga0059261_2947	0.74	+0.7
3,059,585	+		Ga0059261_2947	0.74	+0.4
3,059,586	-		Ga0059261_2947	0.74	-2.2
3,059,586	-		Ga0059261_2947	0.74	+0.4
3,059,586	-		Ga0059261_2947	0.74	-0.9
3,059,586	-		Ga0059261_2947	0.74	+0.4
3,059,626	+		Ga0059261_2947	0.77	+0.0
3,059,626	+		Ga0059261_2947	0.77	+0.9
3,059,626	+		Ga0059261_2947	0.77	+0.6
3,059,626	+		Ga0059261_2947	0.77	-0.4
3,059,626	+		Ga0059261_2947	0.77	-0.5
3,059,627	-		Ga0059261_2947	0.77	+0.6
3,059,627	-				-0.1