Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2617

Experiment: 1-ethyl-3-methylimidazolium chloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 10 mM
2,705,694	+		Ga0059261_2616	0.56	+0.0
2,705,694	+		Ga0059261_2616	0.56	-1.1
2,705,694	+		Ga0059261_2616	0.56	+0.1
2,705,694	+		Ga0059261_2616	0.56	+0.3
2,705,695	-		Ga0059261_2616	0.56	+0.5
2,705,695	-		Ga0059261_2616	0.56	+0.4
2,705,695	-		Ga0059261_2616	0.56	+1.5
2,705,695	-		Ga0059261_2616	0.56	-0.5
2,705,714	-		Ga0059261_2616	0.57	-0.2
2,705,800	+		Ga0059261_2616	0.62	+0.2
2,705,800	+		Ga0059261_2616	0.62	-0.3
2,705,800	+		Ga0059261_2616	0.62	-0.4
2,705,800	+		Ga0059261_2616	0.62	-0.5
2,705,801	-		Ga0059261_2616	0.62	-1.2
2,705,801	-		Ga0059261_2616	0.62	-0.8
2,705,801	-		Ga0059261_2616	0.62	+1.0
2,705,801	-		Ga0059261_2616	0.62	+1.7
2,705,958	+		Ga0059261_2616	0.71	+0.2
2,705,958	+		Ga0059261_2616	0.71	-0.1
2,705,958	+		Ga0059261_2616	0.71	+0.5
2,705,958	+		Ga0059261_2616	0.71	+0.2
2,705,959	-		Ga0059261_2616	0.71	-0.8
2,705,959	-		Ga0059261_2616	0.71	+0.4
2,705,959	-		Ga0059261_2616	0.71	+0.5
2,705,959	-		Ga0059261_2616	0.71	+0.5
2,705,964	+		Ga0059261_2616	0.72	+0.7
2,705,965	-		Ga0059261_2616	0.72	-0.7
2,705,965	-		Ga0059261_2616	0.72	-0.3
2,705,965	-		Ga0059261_2616	0.72	-3.2
2,705,965	-		Ga0059261_2616	0.72	-0.2
2,705,973	+		Ga0059261_2616	0.72	-0.7
2,705,973	+		Ga0059261_2616	0.72	-0.5
2,705,973	+		Ga0059261_2616	0.72	+0.0
2,705,973	+		Ga0059261_2616	0.72	-0.4
2,705,973	+		Ga0059261_2616	0.72	+1.1
2,705,973	+		Ga0059261_2616	0.72	+0.4
2,705,973	+		Ga0059261_2616	0.72	-0.8
2,705,973	+		Ga0059261_2616	0.72	-0.3
2,705,973	+		Ga0059261_2616	0.72	-0.2
2,705,974	-		Ga0059261_2616	0.72	+0.9
2,705,974	-		Ga0059261_2616	0.72	+0.4
2,705,974	-		Ga0059261_2616	0.72	+1.1
2,705,974	-		Ga0059261_2616	0.72	-0.5
2,705,974	-		Ga0059261_2616	0.72	+0.1
2,705,974	-		Ga0059261_2616	0.72	+0.2
2,705,974	-		Ga0059261_2616	0.72	+0.7
2,705,974	-		Ga0059261_2616	0.72	-0.3
2,705,974	-		Ga0059261_2616	0.72	-0.4
2,706,019	+		Ga0059261_2616	0.75	+0.8
2,706,019	+		Ga0059261_2616	0.75	-0.1
2,706,019	+		Ga0059261_2616	0.75	-0.8
2,706,019	+		Ga0059261_2616	0.75	+0.1
2,706,019	+		Ga0059261_2616	0.75	+0.0
2,706,019	+		Ga0059261_2616	0.75	-1.3
2,706,019	+		Ga0059261_2616	0.75	-0.0
2,706,019	+		Ga0059261_2616	0.75	-1.4
2,706,019	+		Ga0059261_2616	0.75	-0.4
2,706,019	+				-0.3
2,706,020	-		Ga0059261_2616	0.75	+0.9
2,706,020	-		Ga0059261_2616	0.75	+0.2
2,706,020	-		Ga0059261_2616	0.75	+0.5
2,706,020	-		Ga0059261_2616	0.75	-0.2
2,706,020	-		Ga0059261_2616	0.75	-0.7
2,706,020	-		Ga0059261_2616	0.75	+0.1
2,706,020	-		Ga0059261_2616	0.75	+0.4
2,706,020	-		Ga0059261_2616	0.75	+0.6
2,706,020	-		Ga0059261_2616	0.75	-0.1
2,706,020	-		Ga0059261_2616	0.75	-0.9
2,706,051	+		Ga0059261_2616	0.77	-0.3
2,706,051	+		Ga0059261_2616	0.77	-0.5
2,706,051	+		Ga0059261_2616	0.77	+0.5
2,706,051	+		Ga0059261_2616	0.77	+0.2
2,706,051	+				-0.8
2,706,052	-		Ga0059261_2616	0.77	+0.3
2,706,052	-		Ga0059261_2616	0.77	+0.2
2,706,052	-		Ga0059261_2616	0.77	-0.3
2,706,052	-		Ga0059261_2616	0.77	-0.2
2,706,052	-		Ga0059261_2616	0.77	+0.5
2,706,052	-		Ga0059261_2616	0.77	-0.1
2,706,052	-		Ga0059261_2616	0.77	-2.2
2,706,052	-		Ga0059261_2616	0.77	+0.3
2,706,052	-		Ga0059261_2616	0.77	-0.6
2,706,159	+		Ga0059261_2616	0.83	+0.3
2,706,159	+		Ga0059261_2616	0.83	+0.9
2,706,159	+		Ga0059261_2616	0.83	-0.6
2,706,159	+		Ga0059261_2616	0.83	+0.4
2,706,160	-		Ga0059261_2616	0.83	-0.7
2,706,160	-		Ga0059261_2616	0.83	-0.7
2,706,160	-		Ga0059261_2616	0.83	-1.9
2,706,162	+		Ga0059261_2616	0.83	+0.5
2,706,162	+		Ga0059261_2616	0.83	-0.3
2,706,162	+		Ga0059261_2616	0.83	+0.2
2,706,162	+		Ga0059261_2616	0.83	-0.1
2,706,162	+		Ga0059261_2616	0.83	-1.1
2,706,162	+		Ga0059261_2616	0.83	+0.2
2,706,163	-		Ga0059261_2616	0.83	+0.5
2,706,163	-		Ga0059261_2616	0.83	+0.2
2,706,369	-				+0.3
2,706,632	-		Ga0059261_2617	0.11	-0.5
2,706,716	+		Ga0059261_2617	0.27	+0.9
2,706,874	+		Ga0059261_2617	0.55	-1.2
2,706,874	+		Ga0059261_2617	0.55	-0.5
2,706,874	+		Ga0059261_2617	0.55	+0.7
2,706,875	-		Ga0059261_2617	0.56	+0.8
2,706,875	-		Ga0059261_2617	0.56	-0.8
2,707,022	+		Ga0059261_2617	0.83	+0.5
2,707,022	+		Ga0059261_2617	0.83	+0.8
2,707,023	-		Ga0059261_2617	0.83	-0.3
2,707,023	-		Ga0059261_2617	0.83	-0.0
2,707,023	-		Ga0059261_2617	0.83	+0.3
2,707,023	-		Ga0059261_2617	0.83	+0.5
2,707,121	+				-0.1
2,707,121	+				-1.4
2,707,121	+				+0.5
2,707,121	+				+0.5
2,707,121	+				+0.1
2,707,121	+				+0.7
2,707,121	+				+1.2
2,707,122	-				-0.5
2,707,122	-				+0.5
2,707,122	-				-0.5
2,707,122	-				+0.3
2,707,123	+				+0.4
2,707,123	+				+0.2
2,707,123	+				-0.6
2,707,123	+				-0.5
2,707,123	+				+1.2
2,707,124	-				+0.3
2,707,124	-				+0.5
2,707,124	-				+0.4
2,707,124	-				-0.6
2,707,124	-				-0.0
2,707,124	-				+0.1
2,707,340	+				+0.5
2,707,341	-				-0.2
2,707,357	+				-0.4
2,707,358	-				-0.3
2,707,386	-				+0.6
2,707,386	-				+0.3
2,707,386	-				-0.3
2,707,713	+		Ga0059261_2618	0.81	-0.7
2,707,713	+		Ga0059261_2618	0.81	+0.2
2,707,713	+		Ga0059261_2618	0.81	+0.2
2,707,714	-				+0.9
2,707,714	-		Ga0059261_2618	0.81	+0.4
2,707,714	-		Ga0059261_2618	0.81	-0.9
2,707,815	+				+0.3
2,707,816	+				-0.6
2,707,816	+				-0.4
2,707,816	+				-0.6
2,707,816	+				+0.4
2,707,816	+				-0.1
2,707,817	-				-0.1
2,707,817	-				+0.3
2,707,817	-				-0.5
2,707,817	-				-0.0
2,707,817	-				+0.1
2,707,817	-				+0.4
2,707,817	-				-0.5
2,707,875	-				-1.3
2,707,886	+				+0.5
2,707,886	+				+0.4
2,707,886	+				-0.3
2,707,886	+				+1.0
2,707,886	+				-0.3
2,707,887	-				-1.1
2,707,887	-				+0.1
2,707,887	-				+0.2
2,708,049	+		Ga0059261_2619	0.14	-0.2
2,708,049	+		Ga0059261_2619	0.14	-0.1
2,708,092	+		Ga0059261_2619	0.18	+0.1