Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_1117

Experiment: 1-ethyl-3-methylimidazolium chloride 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium chloride 10 mM
1,140,961	-				+0.6
1,140,961	-				-1.3
1,140,961	-				+0.7
1,140,961	-				+0.3
1,141,246	-		Ga0059261_1115	0.48	-0.0
1,141,246	-		Ga0059261_1115	0.48	-0.2
1,141,326	+		Ga0059261_1115	0.63	+0.6
1,141,327	-		Ga0059261_1115	0.64	+0.1
1,141,488	+				+1.0
1,141,488	+				-0.0
1,141,489	-				+0.1
1,141,489	-				+0.1
1,141,594	+		Ga0059261_1116	0.18	+0.3
1,141,594	+		Ga0059261_1116	0.18	-0.5
1,141,594	+		Ga0059261_1116	0.18	-0.3
1,141,594	+		Ga0059261_1116	0.18	-0.3
1,141,594	+		Ga0059261_1116	0.18	-1.3
1,141,594	+		Ga0059261_1116	0.18	-1.2
1,141,594	+		Ga0059261_1116	0.18	-1.5
1,141,594	+		Ga0059261_1116	0.18	+0.8
1,141,594	+		Ga0059261_1116	0.18	-0.3
1,141,594	+		Ga0059261_1116	0.18	+0.0
1,141,594	+		Ga0059261_1116	0.18	-0.6
1,141,594	+		Ga0059261_1116	0.18	+0.1
1,141,594	+		Ga0059261_1116	0.18	-0.0
1,141,594	+		Ga0059261_1116	0.18	-0.4
1,141,594	+		Ga0059261_1116	0.18	-0.8
1,141,594	+		Ga0059261_1116	0.18	+0.3
1,141,594	+		Ga0059261_1116	0.18	-0.9
1,141,594	+		Ga0059261_1116	0.18	+0.6
1,141,594	+		Ga0059261_1116	0.18	+1.3
1,141,595	-		Ga0059261_1116	0.18	+0.7
1,141,595	-		Ga0059261_1116	0.18	+0.3
1,141,595	-		Ga0059261_1116	0.18	-0.7
1,141,595	-		Ga0059261_1116	0.18	+0.8
1,141,595	-		Ga0059261_1116	0.18	+0.6
1,141,595	-		Ga0059261_1116	0.18	+0.2
1,141,595	-		Ga0059261_1116	0.18	+1.3
1,141,595	-		Ga0059261_1116	0.18	+0.5
1,141,595	-		Ga0059261_1116	0.18	+0.4
1,141,595	-		Ga0059261_1116	0.18	+0.5
1,141,595	-		Ga0059261_1116	0.18	-0.9
1,141,595	-		Ga0059261_1116	0.18	-0.2
1,141,595	-				+1.9
1,141,736	+		Ga0059261_1116	0.54	+0.7
1,141,736	+		Ga0059261_1116	0.54	+1.1
1,141,736	+		Ga0059261_1116	0.54	-0.0
1,141,736	+				+1.9
1,141,736	+		Ga0059261_1116	0.54	+0.2
1,141,737	-		Ga0059261_1116	0.55	-2.3
1,141,738	+		Ga0059261_1116	0.55	+0.3
1,141,738	+		Ga0059261_1116	0.55	+0.5
1,141,738	+		Ga0059261_1116	0.55	-0.6
1,141,738	+		Ga0059261_1116	0.55	-0.4
1,141,738	+		Ga0059261_1116	0.55	+0.3
1,141,739	-		Ga0059261_1116	0.55	-0.9
1,141,887	+				+0.6
1,141,887	+				+0.2
1,141,887	+				+1.1
1,141,887	+				+1.3
1,141,887	+				-0.1
1,141,888	-				+0.0
1,141,888	-				-1.7
1,141,888	-				-0.3
1,141,888	-				+0.8
1,141,888	-				+0.2
1,141,930	+				+0.9
1,141,930	+				-2.0
1,141,930	+				-1.0
1,141,931	-				+0.3
1,141,976	+				+0.6
1,141,976	+				+1.5
1,141,976	+				+2.0
1,141,976	+				-0.8
1,141,976	+				+0.3
1,141,976	+				-0.3
1,141,977	-				-0.3
1,141,977	-				+0.2
1,141,977	-				+0.2
1,141,977	-				+0.0
1,141,977	-				-0.8
1,142,026	+				+0.1
1,142,281	+		Ga0059261_1117	0.34	+1.6
1,142,281	+		Ga0059261_1117	0.34	+0.1
1,142,281	+		Ga0059261_1117	0.34	-0.2
1,142,281	+		Ga0059261_1117	0.34	-0.0
1,142,281	+		Ga0059261_1117	0.34	-1.6
1,142,281	+		Ga0059261_1117	0.34	+0.5
1,142,281	+		Ga0059261_1117	0.34	-0.2
1,142,282	-		Ga0059261_1117	0.34	+0.2
1,142,282	-		Ga0059261_1117	0.34	+0.7
1,142,282	-		Ga0059261_1117	0.34	+0.3
1,142,282	-		Ga0059261_1117	0.34	+1.4
1,142,282	-		Ga0059261_1117	0.34	-1.9
1,142,282	-		Ga0059261_1117	0.34	+0.2
1,142,282	-		Ga0059261_1117	0.34	-0.8
1,142,282	-		Ga0059261_1117	0.34	-0.4
1,142,387	+		Ga0059261_1117	0.44	+1.6
1,142,387	+		Ga0059261_1117	0.44	-1.3
1,142,387	+		Ga0059261_1117	0.44	-0.1
1,142,388	-		Ga0059261_1117	0.44	+1.9
1,142,388	-		Ga0059261_1117	0.44	+0.3
1,142,388	-		Ga0059261_1117	0.44	+0.4
1,142,388	-		Ga0059261_1117	0.44	+2.0
1,142,388	-		Ga0059261_1117	0.44	+1.1
1,142,388	-		Ga0059261_1117	0.44	+0.0
1,142,388	-		Ga0059261_1117	0.44	-0.2
1,142,985	+				+0.5
1,142,985	+				+0.3
1,142,985	+				-1.6
1,142,985	+				+0.3
1,142,985	+				+0.3
1,142,985	+				-0.4
1,142,985	+				+0.3
1,142,985	+				-0.4
1,142,985	+				+0.0
1,142,985	+				+0.3
1,142,985	+				+0.2
1,142,985	+				+0.3
1,142,986	-				+0.7
1,142,986	-				+0.2
1,142,986	-				+0.0
1,142,986	-				+0.7
1,142,986	-				+0.8
1,142,986	-				+0.9
1,142,986	-				-0.2
1,142,986	-				-0.1
1,142,986	-				+1.1
1,142,986	-				+0.6
1,142,986	-				-0.6
1,142,986	-				+0.4
1,142,986	-				+0.6
1,142,986	-				+2.9
1,143,052	+		Ga0059261_1118	0.10	+0.8
1,143,054	+				-0.7
1,143,054	+		Ga0059261_1118	0.11	+0.2
1,143,054	+		Ga0059261_1118	0.11	-1.0
1,143,054	+		Ga0059261_1118	0.11	+0.3
1,143,054	+		Ga0059261_1118	0.11	-0.0
1,143,054	+		Ga0059261_1118	0.11	-0.3
1,143,055	-		Ga0059261_1118	0.11	+0.7
1,143,055	-		Ga0059261_1118	0.11	+2.0
1,143,055	-		Ga0059261_1118	0.11	+0.2
1,143,055	-		Ga0059261_1118	0.11	-0.6
1,143,055	-		Ga0059261_1118	0.11	-0.6
1,143,055	-		Ga0059261_1118	0.11	+1.3
1,143,055	-		Ga0059261_1118	0.11	-0.8
1,143,055	-		Ga0059261_1118	0.11	+0.7
1,143,055	-		Ga0059261_1118	0.11	-0.5
1,143,055	-				+1.3
1,143,126	+		Ga0059261_1118	0.19	+0.3
1,143,126	+		Ga0059261_1118	0.19	+0.4
1,143,126	+		Ga0059261_1118	0.19	-0.1
1,143,126	+		Ga0059261_1118	0.19	-2.2
1,143,126	+		Ga0059261_1118	0.19	-0.5
1,143,127	-		Ga0059261_1118	0.19	-1.2
1,143,159	+		Ga0059261_1118	0.22	+0.8
1,143,159	+		Ga0059261_1118	0.22	+0.5
1,143,159	+		Ga0059261_1118	0.22	-0.0
1,143,159	+		Ga0059261_1118	0.22	-0.3
1,143,159	+		Ga0059261_1118	0.22	-1.0
1,143,160	-		Ga0059261_1118	0.22	+0.4
1,143,160	-		Ga0059261_1118	0.22	+0.1
1,143,160	-		Ga0059261_1118	0.22	-1.5
1,143,160	-		Ga0059261_1118	0.22	+0.1
1,143,160	-		Ga0059261_1118	0.22	-0.3
1,143,280	-				+3.6
1,143,313	+		Ga0059261_1118	0.39	-0.7
1,143,314	-		Ga0059261_1118	0.40	-0.3
1,143,314	-		Ga0059261_1118	0.40	-0.1
1,143,314	-		Ga0059261_1118	0.40	-0.1
1,143,314	-		Ga0059261_1118	0.40	+1.0
1,143,314	-		Ga0059261_1118	0.40	+0.3
1,143,314	-		Ga0059261_1118	0.40	-0.0
1,143,314	-		Ga0059261_1118	0.40	-0.7
1,143,314	-		Ga0059261_1118	0.40	+0.1
1,143,314	-		Ga0059261_1118	0.40	-0.0
1,143,314	-		Ga0059261_1118	0.40	-0.3
1,143,314	-		Ga0059261_1118	0.40	+1.3
1,143,315	+		Ga0059261_1118	0.40	+0.2
1,143,315	+		Ga0059261_1118	0.40	+0.7
1,143,315	+		Ga0059261_1118	0.40	+0.5
1,143,315	+		Ga0059261_1118	0.40	+0.1
1,143,316	-		Ga0059261_1118	0.40	-0.2
1,143,316	-		Ga0059261_1118	0.40	-0.2
1,143,441	+		Ga0059261_1118	0.54	+0.8
1,143,441	+		Ga0059261_1118	0.54	-0.1
1,143,442	-		Ga0059261_1118	0.54	+0.3
1,143,442	-		Ga0059261_1118	0.54	+0.5
1,143,442	-		Ga0059261_1118	0.54	+0.7
1,143,478	+		Ga0059261_1118	0.58	-0.8
1,143,478	+		Ga0059261_1118	0.58	+0.3
1,143,478	+		Ga0059261_1118	0.58	+0.0
1,143,478	+		Ga0059261_1118	0.58	+0.8
1,143,478	+		Ga0059261_1118	0.58	+1.0
1,143,478	+		Ga0059261_1118	0.58	+0.3
1,143,478	+		Ga0059261_1118	0.58	-0.0
1,143,479	-		Ga0059261_1118	0.58	-0.3
1,143,479	-		Ga0059261_1118	0.58	+0.1
1,143,479	-		Ga0059261_1118	0.58	+0.5
1,143,479	-		Ga0059261_1118	0.58	-0.2
1,143,479	-		Ga0059261_1118	0.58	-0.3