Experiment: 1-ethyl-3-methylimidazolium chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0819 and Ga0059261_0820 are separated by 403 nucleotides Ga0059261_0820 and Ga0059261_0821 are separated by 214 nucleotides Ga0059261_0821 and Ga0059261_0822 are separated by 2 nucleotides
Ga0059261_0819: Ga0059261_0819 - Holliday junction DNA helicase subunit RuvB, at 861,188 to 862,216
_0819
Ga0059261_0820: Ga0059261_0820 - Holliday junction DNA helicase subunit RuvA, at 862,620 to 863,219
_0820
Ga0059261_0821: Ga0059261_0821 - hypothetical protein, at 863,434 to 863,886
_0821
Ga0059261_0822: Ga0059261_0822 - Holliday junction endonuclease RuvC (EC 3.1.22.4), at 863,889 to 864,374
_0822
Position (kb) 862
863
864 Strain fitness (log2 ratio) -1
0
1 at 862.218 kb on + strand at 862.305 kb on - strand at 862.305 kb on - strand at 862.316 kb on + strand at 862.316 kb on + strand at 862.317 kb on - strand at 862.317 kb on - strand at 862.317 kb on - strand at 862.317 kb on - strand at 862.365 kb on + strand at 862.366 kb on - strand at 862.366 kb on - strand at 862.440 kb on + strand at 862.448 kb on + strand at 862.449 kb on - strand at 862.449 kb on - strand at 862.449 kb on - strand at 862.449 kb on - strand at 862.483 kb on - strand at 862.483 kb on - strand at 862.498 kb on - strand at 862.498 kb on - strand at 862.498 kb on - strand at 862.926 kb on + strand, within Ga0059261_0820 at 863.249 kb on - strand at 863.333 kb on - strand at 863.355 kb on + strand at 863.356 kb on - strand at 863.356 kb on - strand at 863.356 kb on - strand at 863.356 kb on - strand at 863.419 kb on - strand at 863.428 kb on + strand at 863.428 kb on + strand at 863.429 kb on - strand at 863.471 kb on + strand at 863.471 kb on + strand at 863.471 kb on + strand at 863.472 kb on - strand at 863.553 kb on + strand, within Ga0059261_0821 at 863.648 kb on + strand, within Ga0059261_0821 at 863.648 kb on + strand, within Ga0059261_0821 at 863.648 kb on + strand, within Ga0059261_0821 at 863.648 kb on + strand, within Ga0059261_0821 at 863.648 kb on + strand, within Ga0059261_0821 at 863.648 kb on + strand, within Ga0059261_0821 at 863.649 kb on - strand, within Ga0059261_0821 at 863.649 kb on - strand, within Ga0059261_0821 at 863.649 kb on - strand, within Ga0059261_0821 at 863.650 kb on + strand, within Ga0059261_0821 at 863.650 kb on + strand, within Ga0059261_0821 at 863.651 kb on - strand, within Ga0059261_0821 at 863.651 kb on - strand, within Ga0059261_0821 at 863.651 kb on - strand, within Ga0059261_0821 at 863.651 kb on - strand, within Ga0059261_0821 at 863.809 kb on - strand, within Ga0059261_0821 at 863.809 kb on - strand, within Ga0059261_0821 at 863.891 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium chloride 10 mM remove 862,218 + -0.7 862,305 - +0.8 862,305 - +0.7 862,316 + -0.9 862,316 + -0.5 862,317 - +0.1 862,317 - -0.3 862,317 - -0.1 862,317 - -0.4 862,365 + +0.3 862,366 - -0.6 862,366 - -1.4 862,440 + +1.1 862,448 + +0.3 862,449 - -0.3 862,449 - -1.4 862,449 - +0.2 862,449 - +0.2 862,483 - +0.0 862,483 - -0.7 862,498 - +0.6 862,498 - -0.9 862,498 - +0.2 862,926 + Ga0059261_0820 0.51 -0.3 863,249 - +0.3 863,333 - -0.5 863,355 + +0.6 863,356 - +1.4 863,356 - -0.4 863,356 - +0.2 863,356 - -0.3 863,419 - +0.2 863,428 + +0.3 863,428 + -0.7 863,429 - -0.5 863,471 + +0.7 863,471 + -1.1 863,471 + -0.6 863,472 - +1.3 863,553 + Ga0059261_0821 0.26 +0.1 863,648 + Ga0059261_0821 0.47 +0.5 863,648 + Ga0059261_0821 0.47 +1.0 863,648 + Ga0059261_0821 0.47 +1.1 863,648 + Ga0059261_0821 0.47 +0.2 863,648 + Ga0059261_0821 0.47 -0.4 863,648 + Ga0059261_0821 0.47 -1.5 863,649 - Ga0059261_0821 0.47 -0.5 863,649 - Ga0059261_0821 0.47 +0.4 863,649 - Ga0059261_0821 0.47 +0.8 863,650 + Ga0059261_0821 0.48 +0.3 863,650 + Ga0059261_0821 0.48 +0.3 863,651 - Ga0059261_0821 0.48 -1.2 863,651 - Ga0059261_0821 0.48 +0.6 863,651 - Ga0059261_0821 0.48 +0.1 863,651 - Ga0059261_0821 0.48 -0.8 863,809 - Ga0059261_0821 0.83 +0.0 863,809 - Ga0059261_0821 0.83 +0.1 863,891 - -0.2
Or see this region's nucleotide sequence