Experiment: 1-ethyl-3-methylimidazolium chloride 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0470 and Ga0059261_0471 overlap by 4 nucleotides Ga0059261_0471 and Ga0059261_0472 are separated by 19 nucleotides Ga0059261_0472 and Ga0059261_0473 are separated by 150 nucleotides Ga0059261_0473 and Ga0059261_0474 overlap by 4 nucleotides
Ga0059261_0470: Ga0059261_0470 - copper-resistance protein, CopA family, at 457,901 to 459,649
_0470
Ga0059261_0471: Ga0059261_0471 - Uncharacterized protein involved in copper resistance, at 459,646 to 460,626
_0471
Ga0059261_0472: Ga0059261_0472 - Predicted metal-binding protein, at 460,646 to 461,098
_0472
Ga0059261_0473: Ga0059261_0473 - Predicted Fe-S protein, at 461,249 to 461,427
_0473
Ga0059261_0474: Ga0059261_0474 - cation diffusion facilitator family transporter, at 461,424 to 462,368
_0474
Position (kb) 460
461
462 Strain fitness (log2 ratio) -2
-1
0
1
2 at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.652 kb on + strand at 459.653 kb on - strand at 459.653 kb on - strand at 459.653 kb on - strand at 459.718 kb on - strand at 459.718 kb on - strand at 459.937 kb on + strand, within Ga0059261_0471 at 459.937 kb on + strand, within Ga0059261_0471 at 459.937 kb on + strand, within Ga0059261_0471 at 459.937 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 459.938 kb on - strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.057 kb on + strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand, within Ga0059261_0471 at 460.058 kb on - strand at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.059 kb on + strand, within Ga0059261_0471 at 460.060 kb on - strand, within Ga0059261_0471 at 460.060 kb on - strand, within Ga0059261_0471 at 460.060 kb on - strand, within Ga0059261_0471 at 460.060 kb on - strand at 460.081 kb on + strand, within Ga0059261_0471 at 460.081 kb on + strand, within Ga0059261_0471 at 460.082 kb on - strand, within Ga0059261_0471 at 460.174 kb on + strand, within Ga0059261_0471 at 460.174 kb on + strand at 460.175 kb on - strand, within Ga0059261_0471 at 460.175 kb on - strand, within Ga0059261_0471 at 460.217 kb on + strand, within Ga0059261_0471 at 460.217 kb on + strand, within Ga0059261_0471 at 460.218 kb on - strand, within Ga0059261_0471 at 460.218 kb on - strand, within Ga0059261_0471 at 460.252 kb on + strand, within Ga0059261_0471 at 460.252 kb on + strand at 460.253 kb on - strand, within Ga0059261_0471 at 460.253 kb on - strand, within Ga0059261_0471 at 460.253 kb on - strand, within Ga0059261_0471 at 460.253 kb on - strand, within Ga0059261_0471 at 460.285 kb on + strand, within Ga0059261_0471 at 460.285 kb on + strand, within Ga0059261_0471 at 460.357 kb on + strand, within Ga0059261_0471 at 460.357 kb on + strand, within Ga0059261_0471 at 460.357 kb on + strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.358 kb on - strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.513 kb on + strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.514 kb on - strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.515 kb on + strand, within Ga0059261_0471 at 460.528 kb on + strand, within Ga0059261_0471 at 460.528 kb on + strand, within Ga0059261_0471 at 460.529 kb on - strand at 460.529 kb on - strand at 460.529 kb on - strand at 460.641 kb on + strand at 460.641 kb on + strand at 460.641 kb on + strand at 460.642 kb on - strand at 460.738 kb on - strand, within Ga0059261_0472 at 460.738 kb on - strand, within Ga0059261_0472 at 460.738 kb on - strand, within Ga0059261_0472 at 461.023 kb on - strand, within Ga0059261_0472 at 461.023 kb on - strand, within Ga0059261_0472 at 461.045 kb on + strand, within Ga0059261_0472 at 461.045 kb on + strand, within Ga0059261_0472 at 461.096 kb on + strand at 461.096 kb on + strand at 461.096 kb on + strand at 461.097 kb on - strand at 461.097 kb on - strand at 461.149 kb on + strand at 461.149 kb on + strand at 461.149 kb on + strand at 461.150 kb on - strand at 461.150 kb on - strand at 461.150 kb on - strand at 461.165 kb on + strand at 461.165 kb on + strand at 461.166 kb on - strand at 461.166 kb on - strand at 461.191 kb on + strand at 461.191 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.193 kb on + strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.194 kb on - strand at 461.219 kb on + strand at 461.220 kb on - strand at 461.234 kb on + strand at 461.234 kb on + strand at 461.237 kb on + strand at 461.237 kb on + strand at 461.237 kb on + strand at 461.238 kb on - strand at 461.251 kb on - strand at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.303 kb on + strand, within Ga0059261_0473 at 461.304 kb on - strand, within Ga0059261_0473 at 461.304 kb on - strand, within Ga0059261_0473 at 461.359 kb on - strand, within Ga0059261_0473 at 461.440 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.441 kb on + strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.442 kb on - strand at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.520 kb on + strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.521 kb on - strand, within Ga0059261_0474 at 461.658 kb on - strand, within Ga0059261_0474 at 461.709 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.744 kb on - strand, within Ga0059261_0474 at 461.768 kb on + strand, within Ga0059261_0474 at 461.810 kb on - strand, within Ga0059261_0474 at 461.810 kb on - strand, within Ga0059261_0474 at 461.825 kb on + strand, within Ga0059261_0474 at 461.825 kb on + strand, within Ga0059261_0474 at 461.826 kb on - strand, within Ga0059261_0474 at 461.826 kb on - strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.828 kb on + strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.829 kb on - strand, within Ga0059261_0474 at 461.940 kb on - strand, within Ga0059261_0474 at 462.004 kb on + strand, within Ga0059261_0474 at 462.005 kb on - strand, within Ga0059261_0474 at 462.036 kb on + strand, within Ga0059261_0474
Per-strain Table
Position Strand Gene LocusTag Fraction 1-ethyl-3-methylimidazolium chloride 10 mM remove 459,652 + +1.4 459,652 + -0.1 459,652 + +0.1 459,652 + +0.9 459,652 + -0.8 459,652 + -0.2 459,652 + +1.4 459,653 - +0.2 459,653 - -0.4 459,653 - +1.1 459,718 - -1.3 459,718 - -0.6 459,937 + Ga0059261_0471 0.30 -0.1 459,937 + Ga0059261_0471 0.30 +0.2 459,937 + Ga0059261_0471 0.30 +0.1 459,937 - Ga0059261_0471 0.30 +0.3 459,938 - Ga0059261_0471 0.30 +0.8 459,938 - Ga0059261_0471 0.30 +0.5 459,938 - Ga0059261_0471 0.30 -0.3 459,938 - Ga0059261_0471 0.30 -0.1 459,938 - Ga0059261_0471 0.30 -0.9 460,057 + Ga0059261_0471 0.42 -0.5 460,057 + Ga0059261_0471 0.42 -0.2 460,057 + Ga0059261_0471 0.42 -0.4 460,057 + Ga0059261_0471 0.42 -1.9 460,057 + Ga0059261_0471 0.42 +0.7 460,057 + Ga0059261_0471 0.42 +0.5 460,057 + Ga0059261_0471 0.42 +0.8 460,057 + Ga0059261_0471 0.42 -0.6 460,057 + Ga0059261_0471 0.42 -0.2 460,057 + Ga0059261_0471 0.42 +0.1 460,057 + Ga0059261_0471 0.42 -0.3 460,057 + Ga0059261_0471 0.42 -0.6 460,058 - Ga0059261_0471 0.42 -1.6 460,058 - Ga0059261_0471 0.42 +0.7 460,058 - Ga0059261_0471 0.42 -0.5 460,058 - Ga0059261_0471 0.42 +0.3 460,058 - Ga0059261_0471 0.42 -0.1 460,058 - -0.2 460,059 + Ga0059261_0471 0.42 -0.4 460,059 + Ga0059261_0471 0.42 +0.2 460,059 + Ga0059261_0471 0.42 -0.0 460,059 + Ga0059261_0471 0.42 -1.7 460,059 + Ga0059261_0471 0.42 -0.8 460,059 + Ga0059261_0471 0.42 -0.5 460,059 + Ga0059261_0471 0.42 +0.3 460,059 + Ga0059261_0471 0.42 +0.4 460,060 - Ga0059261_0471 0.42 -0.2 460,060 - Ga0059261_0471 0.42 +0.3 460,060 - Ga0059261_0471 0.42 +0.4 460,060 - +0.8 460,081 + Ga0059261_0471 0.44 +0.0 460,081 + Ga0059261_0471 0.44 +0.3 460,082 - Ga0059261_0471 0.44 +0.1 460,174 + Ga0059261_0471 0.54 -0.7 460,174 + +0.2 460,175 - Ga0059261_0471 0.54 -0.2 460,175 - Ga0059261_0471 0.54 +0.2 460,217 + Ga0059261_0471 0.58 -0.6 460,217 + Ga0059261_0471 0.58 +0.1 460,218 - Ga0059261_0471 0.58 +0.1 460,218 - Ga0059261_0471 0.58 +2.6 460,252 + Ga0059261_0471 0.62 -0.2 460,252 + +0.8 460,253 - Ga0059261_0471 0.62 +0.8 460,253 - Ga0059261_0471 0.62 -0.0 460,253 - Ga0059261_0471 0.62 -0.6 460,253 - Ga0059261_0471 0.62 -0.5 460,285 + Ga0059261_0471 0.65 +0.2 460,285 + Ga0059261_0471 0.65 -2.1 460,357 + Ga0059261_0471 0.72 +0.6 460,357 + Ga0059261_0471 0.72 +1.1 460,357 + Ga0059261_0471 0.72 +0.2 460,358 - Ga0059261_0471 0.73 +0.2 460,358 - Ga0059261_0471 0.73 +0.7 460,358 - Ga0059261_0471 0.73 +0.4 460,358 - Ga0059261_0471 0.73 -1.0 460,513 + Ga0059261_0471 0.88 +0.6 460,513 + Ga0059261_0471 0.88 -0.0 460,513 + Ga0059261_0471 0.88 +0.5 460,513 + Ga0059261_0471 0.88 -0.5 460,514 - Ga0059261_0471 0.88 +0.3 460,514 - Ga0059261_0471 0.88 +0.2 460,514 - Ga0059261_0471 0.88 -0.7 460,514 - Ga0059261_0471 0.88 +0.4 460,514 - Ga0059261_0471 0.88 -0.2 460,514 - Ga0059261_0471 0.88 -0.1 460,514 - Ga0059261_0471 0.88 +0.3 460,515 + Ga0059261_0471 0.89 -0.0 460,515 + Ga0059261_0471 0.89 +0.3 460,515 + Ga0059261_0471 0.89 +1.4 460,528 + Ga0059261_0471 0.90 -0.6 460,528 + Ga0059261_0471 0.90 -0.1 460,529 - -0.1 460,529 - +0.1 460,529 - -0.5 460,641 + -0.2 460,641 + +0.4 460,641 + -0.6 460,642 - +0.1 460,738 - Ga0059261_0472 0.20 +0.6 460,738 - Ga0059261_0472 0.20 -0.0 460,738 - Ga0059261_0472 0.20 -0.0 461,023 - Ga0059261_0472 0.83 +0.3 461,023 - Ga0059261_0472 0.83 +1.8 461,045 + Ga0059261_0472 0.88 -0.5 461,045 + Ga0059261_0472 0.88 +0.4 461,096 + -0.1 461,096 + -0.4 461,096 + +0.8 461,097 - -0.0 461,097 - +0.1 461,149 + +0.1 461,149 + +0.7 461,149 + +0.2 461,150 - -0.9 461,150 - -0.9 461,150 - +0.4 461,165 + -0.7 461,165 + +0.4 461,166 - -1.2 461,166 - -0.7 461,191 + -0.2 461,191 + -0.5 461,193 + -0.5 461,193 + +0.4 461,193 + -0.8 461,193 + -0.6 461,193 + +1.0 461,193 + -0.4 461,194 - -0.5 461,194 - +1.7 461,194 - -1.9 461,194 - -0.2 461,194 - -0.2 461,194 - -0.4 461,194 - +0.9 461,219 + -0.2 461,220 - +0.1 461,234 + -0.4 461,234 + +0.0 461,237 + -0.8 461,237 + -0.3 461,237 + -0.2 461,238 - +0.4 461,251 - -0.5 461,303 + Ga0059261_0473 0.30 +1.7 461,303 + Ga0059261_0473 0.30 -0.9 461,303 + Ga0059261_0473 0.30 -0.5 461,303 + Ga0059261_0473 0.30 +0.4 461,304 - Ga0059261_0473 0.31 -0.4 461,304 - Ga0059261_0473 0.31 +0.0 461,359 - Ga0059261_0473 0.61 +1.0 461,440 + +0.1 461,441 + +0.2 461,441 + +0.4 461,441 + +0.6 461,441 + -0.0 461,441 + +0.8 461,442 - -0.4 461,442 - +0.9 461,442 - -1.0 461,442 - -0.2 461,442 - -0.2 461,442 - -0.4 461,442 - +0.0 461,442 - -1.0 461,520 + Ga0059261_0474 0.10 +0.3 461,520 + Ga0059261_0474 0.10 +0.3 461,520 + Ga0059261_0474 0.10 +0.7 461,520 + Ga0059261_0474 0.10 +0.4 461,520 + Ga0059261_0474 0.10 -1.5 461,521 - Ga0059261_0474 0.10 -0.5 461,521 - Ga0059261_0474 0.10 -0.0 461,521 - Ga0059261_0474 0.10 -0.8 461,521 - Ga0059261_0474 0.10 -0.9 461,521 - Ga0059261_0474 0.10 +0.0 461,521 - Ga0059261_0474 0.10 -0.1 461,521 - Ga0059261_0474 0.10 -1.4 461,521 - Ga0059261_0474 0.10 -0.6 461,521 - Ga0059261_0474 0.10 -0.5 461,658 - Ga0059261_0474 0.25 -1.2 461,709 - Ga0059261_0474 0.30 -0.7 461,744 - Ga0059261_0474 0.34 -0.1 461,744 - Ga0059261_0474 0.34 -1.1 461,744 - Ga0059261_0474 0.34 +0.4 461,768 + Ga0059261_0474 0.36 -0.2 461,810 - Ga0059261_0474 0.41 -0.9 461,810 - Ga0059261_0474 0.41 +0.3 461,825 + Ga0059261_0474 0.42 +1.6 461,825 + Ga0059261_0474 0.42 +1.0 461,826 - Ga0059261_0474 0.43 -0.5 461,826 - Ga0059261_0474 0.43 -0.3 461,828 + Ga0059261_0474 0.43 +1.6 461,828 + Ga0059261_0474 0.43 +0.2 461,828 + Ga0059261_0474 0.43 +0.7 461,828 + Ga0059261_0474 0.43 -0.0 461,829 - Ga0059261_0474 0.43 +0.0 461,829 - Ga0059261_0474 0.43 +1.2 461,829 - Ga0059261_0474 0.43 -1.1 461,940 - Ga0059261_0474 0.55 -1.1 462,004 + Ga0059261_0474 0.61 +0.1 462,005 - Ga0059261_0474 0.61 +0.2 462,036 + Ga0059261_0474 0.65 +0.4
Or see this region's nucleotide sequence