Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24415

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
5,943,523	+		CA265_RS24410	0.27	+1.0
5,943,581	-		CA265_RS24410	0.32	+0.0
5,943,591	+		CA265_RS24410	0.33	+0.1
5,943,601	+		CA265_RS24410	0.34	+0.3
5,943,642	-		CA265_RS24410	0.37	-0.7
5,943,676	+		CA265_RS24410	0.40	-0.1
5,943,678	+		CA265_RS24410	0.40	+1.3
5,943,678	+		CA265_RS24410	0.40	+0.3
5,943,679	-		CA265_RS24410	0.41	-1.4
5,943,679	-		CA265_RS24410	0.41	-0.7
5,943,679	-		CA265_RS24410	0.41	+0.3
5,943,700	+		CA265_RS24410	0.42	+1.6
5,943,712	+		CA265_RS24410	0.43	-2.0
5,943,713	-		CA265_RS24410	0.43	+0.2
5,943,808	-		CA265_RS24410	0.52	-0.1
5,943,833	+		CA265_RS24410	0.54	-1.5
5,943,897	+		CA265_RS24410	0.59	-0.8
5,943,898	-		CA265_RS24410	0.59	-0.1
5,943,920	+		CA265_RS24410	0.61	+0.1
5,944,099	+		CA265_RS24410	0.77	-1.4
5,944,099	+		CA265_RS24410	0.77	-1.2
5,944,100	-		CA265_RS24410	0.77	+0.5
5,944,100	-		CA265_RS24410	0.77	+0.1
5,944,139	+		CA265_RS24410	0.80	+0.9
5,944,140	-		CA265_RS24410	0.80	-0.1
5,944,255	-				+0.1
5,944,255	-				+0.2
5,944,259	+				-2.0
5,944,260	-				-1.4
5,944,260	-				-0.1
5,944,448	-				-0.0
5,944,471	-				-0.9
5,944,485	+				-1.3
5,944,486	-				+0.1
5,944,541	+				-1.9
5,944,541	+				-0.1
5,944,542	-				+0.2
5,944,629	-				+0.1
5,944,652	-				+1.1
5,944,839	+		CA265_RS24415	0.11	+3.0
5,944,855	+		CA265_RS24415	0.12	+1.7
5,944,856	-		CA265_RS24415	0.12	-1.0
5,945,005	+		CA265_RS24415	0.16	-1.3
5,945,006	-		CA265_RS24415	0.17	-0.2
5,945,031	-		CA265_RS24415	0.17	-1.5
5,945,031	-		CA265_RS24415	0.17	+0.9
5,945,054	+		CA265_RS24415	0.18	-1.2
5,945,065	-		CA265_RS24415	0.18	-0.7
5,945,065	-				-0.1
5,945,098	+		CA265_RS24415	0.19	-0.2
5,945,098	+		CA265_RS24415	0.19	+1.1
5,945,099	-		CA265_RS24415	0.19	-0.5
5,945,100	+		CA265_RS24415	0.19	-0.7
5,945,101	-		CA265_RS24415	0.19	-1.1
5,945,101	-		CA265_RS24415	0.19	-0.1
5,945,117	+		CA265_RS24415	0.20	+2.1
5,945,118	-		CA265_RS24415	0.20	-0.7
5,945,118	-		CA265_RS24415	0.20	-0.0
5,945,172	-		CA265_RS24415	0.22	+0.1
5,945,182	+		CA265_RS24415	0.22	-1.0
5,945,183	-		CA265_RS24415	0.22	+0.3
5,945,266	-		CA265_RS24415	0.25	-0.6
5,945,356	-		CA265_RS24415	0.27	-0.2
5,945,418	-		CA265_RS24415	0.29	-1.7
5,945,418	-		CA265_RS24415	0.29	-1.1
5,945,423	-		CA265_RS24415	0.29	+1.7
5,945,497	+		CA265_RS24415	0.32	-1.0
5,945,508	-		CA265_RS24415	0.32	-0.6
5,945,508	-		CA265_RS24415	0.32	+0.3
5,945,544	-		CA265_RS24415	0.33	+0.5
5,945,551	+		CA265_RS24415	0.33	+0.2
5,945,552	-		CA265_RS24415	0.33	+0.7
5,945,552	-		CA265_RS24415	0.33	+0.4
5,945,552	-		CA265_RS24415	0.33	-1.6
5,945,572	+		CA265_RS24415	0.34	+0.1
5,945,586	-		CA265_RS24415	0.34	-0.1
5,945,618	+		CA265_RS24415	0.35	-0.3
5,945,625	+		CA265_RS24415	0.36	+1.3
5,945,664	+		CA265_RS24415	0.37	-0.1
5,945,685	+		CA265_RS24415	0.38	-0.2
5,945,739	+		CA265_RS24415	0.39	-0.9
5,945,771	+		CA265_RS24415	0.40	-0.2
5,945,772	-		CA265_RS24415	0.40	+0.4
5,945,775	+		CA265_RS24415	0.40	+0.4
5,945,776	-		CA265_RS24415	0.40	-0.8
5,945,794	-		CA265_RS24415	0.41	-1.3
5,945,817	+		CA265_RS24415	0.42	+1.4
5,945,818	-		CA265_RS24415	0.42	-0.2
5,945,876	+		CA265_RS24415	0.43	+0.7
5,945,882	-		CA265_RS24415	0.44	-0.1
5,945,906	-		CA265_RS24415	0.44	-1.3
5,945,926	-		CA265_RS24415	0.45	+0.6
5,945,935	+		CA265_RS24415	0.45	-0.1
5,946,072	-		CA265_RS24415	0.50	+0.4
5,946,134	+		CA265_RS24415	0.51	-0.9
5,946,166	+		CA265_RS24415	0.52	-1.2
5,946,166	+		CA265_RS24415	0.52	+1.5
5,946,169	-		CA265_RS24415	0.53	-0.4
5,946,233	-		CA265_RS24415	0.55	+0.3
5,946,256	+		CA265_RS24415	0.55	-0.6
5,946,263	+		CA265_RS24415	0.55	+0.2
5,946,298	+		CA265_RS24415	0.57	-0.3
5,946,342	+		CA265_RS24415	0.58	-0.7
5,946,358	+		CA265_RS24415	0.58	-0.3
5,946,383	-		CA265_RS24415	0.59	+0.1
5,946,398	+		CA265_RS24415	0.60	-0.7
5,946,426	+		CA265_RS24415	0.61	+0.0
5,946,516	+		CA265_RS24415	0.63	+1.1
5,946,517	-		CA265_RS24415	0.63	-0.3
5,946,528	+		CA265_RS24415	0.64	-0.4
5,946,561	+				+1.7
5,946,564	-		CA265_RS24415	0.65	-0.7
5,946,579	+		CA265_RS24415	0.65	-0.3
5,946,580	-		CA265_RS24415	0.65	-1.9
5,946,582	-				+1.1
5,946,604	-		CA265_RS24415	0.66	+1.0
5,946,604	-		CA265_RS24415	0.66	+0.4
5,946,874	+		CA265_RS24415	0.74	+0.7
5,946,875	-		CA265_RS24415	0.74	+1.7
5,946,951	-		CA265_RS24415	0.77	-0.3
5,946,974	+		CA265_RS24415	0.77	-0.3
5,946,975	-		CA265_RS24415	0.78	-0.9
5,946,975	-		CA265_RS24415	0.78	+1.3
5,946,978	+		CA265_RS24415	0.78	+1.7
5,947,187	-		CA265_RS24415	0.84	-0.8
5,947,229	+		CA265_RS24415	0.85	-0.0
5,947,282	-		CA265_RS24415	0.87	-0.6
5,947,357	+		CA265_RS24415	0.89	-0.6
5,947,385	+				-1.0
5,947,386	-				-0.1
5,947,409	-				-0.1
5,947,411	+				+1.3
5,947,419	+				-2.3
5,947,452	-				+0.0
5,947,467	-				-0.4
5,947,470	+				+0.1
5,947,489	+				+0.1
5,947,490	-				-0.7
5,947,508	-				-1.0
5,947,512	-				+1.8
5,947,562	-				-0.6
5,947,579	-				-0.3
5,947,593	-				+0.7
5,947,612	+				+2.0
5,947,613	-				-1.2
5,947,644	-				+0.2
5,947,649	-				-0.0
5,947,649	-				-1.0
5,947,672	+				+0.2
5,947,673	-				-0.1
5,947,673	-				-0.2
5,947,685	+				+0.7
5,947,686	-				-1.2
5,947,689	-				-2.0
5,947,689	-				-0.8
5,947,706	-				-0.8
5,947,721	+				+0.4
5,947,845	+				-1.5
5,947,861	+				-0.2
5,947,861	+				-0.4
5,947,861	+				-0.1
5,947,862	-				+0.0
5,947,915	+		CA265_RS24420	0.13	-0.8
5,947,916	-		CA265_RS24420	0.13	-1.4
5,947,957	-		CA265_RS24420	0.16	+1.7
5,947,961	+		CA265_RS24420	0.16	-1.2
5,947,972	+		CA265_RS24420	0.17	+0.4
5,948,152	+		CA265_RS24420	0.28	-0.1
5,948,260	-		CA265_RS24420	0.35	-0.6
5,948,304	+		CA265_RS24420	0.38	-1.1
5,948,305	-		CA265_RS24420	0.38	-0.8
5,948,315	+		CA265_RS24420	0.38	-0.0
5,948,315	+		CA265_RS24420	0.38	-0.6
5,948,570	-		CA265_RS24420	0.55	+0.9
5,948,572	-		CA265_RS24420	0.55	-0.9