Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15470

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
3,889,709	-				+0.3
3,889,826	+				+0.1
3,889,854	+				+0.3
3,889,883	-				-0.6
3,889,883	-				+0.8
3,889,886	-				-0.2
3,889,965	+				+0.1
3,890,032	+				+0.4
3,890,032	+				-0.2
3,890,041	+				-1.1
3,890,041	+				+0.9
3,890,052	-				+0.6
3,890,107	+				+0.6
3,890,177	+				-1.0
3,890,196	+				-0.4
3,890,211	+				+0.3
3,890,304	+		CA265_RS15470	0.10	-0.8
3,890,368	+		CA265_RS15470	0.13	-0.4
3,890,368	+		CA265_RS15470	0.13	-0.6
3,890,369	-		CA265_RS15470	0.13	-0.2
3,890,369	-		CA265_RS15470	0.13	+0.0
3,890,387	+		CA265_RS15470	0.14	-0.7
3,890,391	+		CA265_RS15470	0.14	-0.6
3,890,566	-		CA265_RS15470	0.23	-1.1
3,890,628	+		CA265_RS15470	0.27	+1.0
3,890,826	+		CA265_RS15470	0.37	+0.3
3,890,833	+		CA265_RS15470	0.37	-1.7
3,890,865	-		CA265_RS15470	0.39	+0.4
3,890,938	+		CA265_RS15470	0.42	-0.2
3,891,004	-		CA265_RS15470	0.46	-1.3
3,891,081	+		CA265_RS15470	0.50	+0.0
3,891,081	+		CA265_RS15470	0.50	-0.8
3,891,082	-		CA265_RS15470	0.50	-0.2
3,891,150	+		CA265_RS15470	0.53	+0.1
3,891,175	-		CA265_RS15470	0.54	-1.0
3,891,240	-		CA265_RS15470	0.58	-0.0
3,891,240	-		CA265_RS15470	0.58	+1.1
3,891,261	-		CA265_RS15470	0.59	+1.3
3,891,285	+		CA265_RS15470	0.60	-0.7
3,891,449	+		CA265_RS15470	0.68	+2.6
3,891,540	+		CA265_RS15470	0.73	+0.5
3,891,554	+		CA265_RS15470	0.74	-0.6
3,891,555	-		CA265_RS15470	0.74	-0.6
3,891,611	+		CA265_RS15470	0.76	-0.1
3,891,634	+		CA265_RS15470	0.78	-0.3
3,891,635	-		CA265_RS15470	0.78	+1.8
3,891,705	+		CA265_RS15470	0.81	-0.6
3,891,791	+		CA265_RS15470	0.86	-0.6
3,891,808	-		CA265_RS15470	0.86	-0.5
3,891,812	+		CA265_RS15470	0.87	-0.5
3,891,838	+		CA265_RS15470	0.88	+0.6
3,891,839	-		CA265_RS15470	0.88	-1.0
3,891,978	-				-0.1
3,892,007	-				+0.6
3,892,105	+				+0.7
3,892,322	-				-0.8
3,892,342	+				-0.1
3,892,349	+				-1.0
3,892,412	+				-0.4
3,892,459	-				-0.3
3,892,529	+				-0.4
3,892,530	-				+0.9
3,892,604	+				+0.6
3,892,609	+				+0.2
3,892,610	-				-0.7
3,892,674	+				+0.0
3,892,756	+		CA265_RS15475	0.38	-2.2
3,892,756	+		CA265_RS15475	0.38	+1.2
3,892,756	+		CA265_RS15475	0.38	-1.2
3,892,771	-		CA265_RS15475	0.45	-0.0
3,892,783	-		CA265_RS15475	0.50	-1.5
3,892,791	-		CA265_RS15475	0.54	+0.1
3,892,808	-		CA265_RS15475	0.62	-0.8
3,892,838	+		CA265_RS15475	0.75	+0.6
3,892,880	+				+3.0
3,892,880	+				+0.8
3,892,880	+				-2.6
3,892,881	-				-0.0
3,892,935	-				-2.1
3,893,002	+				-0.0
3,893,011	-				+0.3
3,893,038	+				+0.4
3,893,068	-				+0.8