Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13945

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
3,509,241	-				-1.0
3,509,363	-				+0.4
3,509,370	-				+0.5
3,509,373	+				-1.0
3,509,374	-				-0.8
3,509,538	+		CA265_RS13940	0.14	-0.2
3,509,542	+		CA265_RS13940	0.14	-0.4
3,509,565	+		CA265_RS13940	0.18	+0.6
3,509,602	+		CA265_RS13940	0.24	+0.1
3,509,618	+		CA265_RS13940	0.27	+0.3
3,509,666	+		CA265_RS13940	0.34	-0.8
3,509,707	-		CA265_RS13940	0.41	-0.9
3,509,821	-		CA265_RS13940	0.59	-1.6
3,509,840	+		CA265_RS13940	0.62	+0.9
3,510,071	-				-1.4
3,510,153	-				+1.4
3,510,240	+				+0.3
3,510,263	+				+0.0
3,510,405	+		CA265_RS13945	0.13	+0.2
3,510,499	+		CA265_RS13945	0.20	+0.1
3,510,500	-		CA265_RS13945	0.20	-0.3
3,510,514	-		CA265_RS13945	0.21	+0.3
3,510,520	-		CA265_RS13945	0.22	+0.0
3,510,593	+		CA265_RS13945	0.27	-0.1
3,510,610	+		CA265_RS13945	0.28	+1.8
3,510,650	+		CA265_RS13945	0.31	+0.5
3,510,650	+		CA265_RS13945	0.31	-0.2
3,510,740	-		CA265_RS13945	0.38	-0.7
3,510,798	-		CA265_RS13945	0.42	-0.4
3,510,845	+		CA265_RS13945	0.46	-2.3
3,510,868	-		CA265_RS13945	0.48	+0.6
3,510,930	+		CA265_RS13945	0.52	-0.6
3,511,006	-		CA265_RS13945	0.58	-0.2
3,511,006	-		CA265_RS13945	0.58	+0.2
3,511,027	+		CA265_RS13945	0.59	+1.8
3,511,028	-		CA265_RS13945	0.59	-0.8
3,511,028	-		CA265_RS13945	0.59	+0.5
3,511,056	-		CA265_RS13945	0.61	-0.4
3,511,140	+		CA265_RS13945	0.68	+0.1
3,511,141	-		CA265_RS13945	0.68	+0.2
3,511,197	+		CA265_RS13945	0.72	-0.6
3,511,216	-		CA265_RS13945	0.73	+0.3
3,511,219	+		CA265_RS13945	0.74	-0.5
3,511,219	+		CA265_RS13945	0.74	-1.1
3,511,256	+		CA265_RS13945	0.76	-0.8
3,511,257	-		CA265_RS13945	0.76	+0.2
3,511,274	+		CA265_RS13945	0.78	+0.1
3,511,274	+		CA265_RS13945	0.78	+0.6
3,511,274	+		CA265_RS13945	0.78	+0.9
3,511,275	-		CA265_RS13945	0.78	-0.5
3,511,321	-		CA265_RS13945	0.81	-0.1
3,511,392	+		CA265_RS13945	0.86	+0.9
3,511,397	+		CA265_RS13945	0.87	-1.0
3,511,397	+		CA265_RS13945	0.87	+0.4
3,511,398	-		CA265_RS13945	0.87	-0.9
3,511,476	-				+1.0
3,511,486	+				+0.2
3,511,491	+				+0.4
3,511,501	+				-0.3
3,511,649	+				+0.1
3,511,652	+				+1.0
3,511,789	-		CA265_RS13950	0.36	+0.3
3,511,870	-		CA265_RS13950	0.53	-1.1
3,511,883	-		CA265_RS13950	0.55	-0.2
3,511,918	-		CA265_RS13950	0.63	-0.2
3,511,931	-		CA265_RS13950	0.66	-1.3
3,511,957	+		CA265_RS13950	0.71	+2.2
3,512,002	+		CA265_RS13950	0.81	+0.6
3,512,083	+				-0.8
3,512,083	+				-0.4
3,512,116	+				+0.7
3,512,192	+				-1.2
3,512,247	-				-0.0
3,512,323	+				-0.3
3,512,323	+				-0.4
3,512,323	+				-0.7
3,512,338	-				+0.1
3,512,352	-				-1.2
3,512,402	-		CA265_RS13955	0.11	+0.9
3,512,413	+		CA265_RS13955	0.12	-0.1
3,512,413	+		CA265_RS13955	0.12	-1.4
3,512,420	-		CA265_RS13955	0.12	+0.7
3,512,422	+		CA265_RS13955	0.12	-1.5
3,512,423	-		CA265_RS13955	0.12	-0.9
3,512,423	-		CA265_RS13955	0.12	-0.8
3,512,451	+		CA265_RS13955	0.13	+0.0
3,512,452	-		CA265_RS13955	0.13	+0.3