Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12115

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
3,001,643	+		CA265_RS12110	0.66	+0.9
3,001,644	-		CA265_RS12110	0.66	-0.6
3,001,676	+		CA265_RS12110	0.68	-0.7
3,001,696	+		CA265_RS12110	0.70	+0.8
3,001,696	+		CA265_RS12110	0.70	+0.4
3,001,697	-		CA265_RS12110	0.70	+0.0
3,001,697	-		CA265_RS12110	0.70	+0.1
3,001,697	-		CA265_RS12110	0.70	-1.5
3,001,697	-		CA265_RS12110	0.70	-1.9
3,001,747	-		CA265_RS12110	0.73	-0.2
3,001,761	+		CA265_RS12110	0.74	+0.3
3,001,780	+		CA265_RS12110	0.75	+0.9
3,001,781	-		CA265_RS12110	0.75	+0.7
3,001,782	+		CA265_RS12110	0.75	+0.6
3,001,814	-		CA265_RS12110	0.77	+0.6
3,001,829	+		CA265_RS12110	0.78	-1.2
3,001,862	+		CA265_RS12110	0.80	+0.0
3,001,869	+		CA265_RS12110	0.80	-1.0
3,001,869	+		CA265_RS12110	0.80	+0.5
3,001,885	-		CA265_RS12110	0.81	+1.0
3,001,921	+		CA265_RS12110	0.83	-0.8
3,001,923	+		CA265_RS12110	0.84	-0.3
3,001,923	+		CA265_RS12110	0.84	-0.0
3,001,924	-		CA265_RS12110	0.84	-0.0
3,001,924	-		CA265_RS12110	0.84	-0.4
3,001,924	-		CA265_RS12110	0.84	-1.8
3,001,924	-		CA265_RS12110	0.84	+0.1
3,001,926	+		CA265_RS12110	0.84	+0.9
3,002,071	-				+0.0
3,002,073	-				-0.1
3,002,073	-				+0.4
3,002,076	+				-0.1
3,002,083	+				+1.4
3,002,083	+				+1.4
3,002,084	-				-0.9
3,002,084	-				+0.1
3,002,122	+				-0.7
3,002,126	+				-0.6
3,002,126	+				-2.8
3,002,127	-				-0.9
3,002,127	-				+0.1
3,002,188	+				+0.3
3,002,210	-				+0.0
3,002,216	-				-0.4
3,002,218	+				-0.5
3,002,219	-				-0.5
3,002,351	-				+0.1
3,002,401	-				+0.9
3,002,418	+				+0.4
3,002,563	-				+0.1
3,002,571	-				+0.3
3,002,622	+				+0.6
3,002,727	+				-0.6
3,002,739	+				+0.8
3,002,771	-				+0.2
3,002,797	-		CA265_RS12115	0.12	+0.9
3,002,830	+		CA265_RS12115	0.14	-0.4
3,003,016	+		CA265_RS12115	0.28	+0.4
3,003,022	+		CA265_RS12115	0.29	+0.8
3,003,040	-		CA265_RS12115	0.30	-0.3
3,003,150	-		CA265_RS12115	0.39	-0.6
3,003,457	-		CA265_RS12115	0.62	+0.3
3,003,484	+		CA265_RS12115	0.64	-0.3
3,003,485	-		CA265_RS12115	0.64	+0.0
3,003,528	-		CA265_RS12115	0.67	+1.1
3,003,528	-				+1.1
3,003,582	+		CA265_RS12115	0.71	+0.2
3,003,582	+		CA265_RS12115	0.71	+0.1
3,003,632	-		CA265_RS12115	0.75	+1.7
3,003,794	+		CA265_RS12115	0.88	+0.4
3,003,795	-		CA265_RS12115	0.88	-2.8
3,003,953	-				+0.1
3,003,958	-				-0.7
3,003,968	-				+0.2
3,004,024	-				+0.0
3,004,034	-				+0.1
3,004,050	-				-0.3
3,004,083	-				-0.8
3,004,136	+				-2.1
3,004,171	+				-0.9
3,004,285	-		CA265_RS12120	0.11	-0.1
3,004,285	-		CA265_RS12120	0.11	-0.2
3,004,285	-		CA265_RS12120	0.11	+0.5
3,004,288	-		CA265_RS12120	0.11	-1.1
3,004,305	+		CA265_RS12120	0.12	-0.3
3,004,305	+		CA265_RS12120	0.12	-1.0
3,004,306	-		CA265_RS12120	0.12	-0.3
3,004,336	-		CA265_RS12120	0.14	+0.2
3,004,338	+		CA265_RS12120	0.14	-2.2
3,004,357	-		CA265_RS12120	0.15	+0.1
3,004,473	+		CA265_RS12120	0.23	+0.6
3,004,480	+		CA265_RS12120	0.23	+0.7
3,004,484	-		CA265_RS12120	0.23	+0.1
3,004,505	+		CA265_RS12120	0.25	-0.8
3,004,518	+		CA265_RS12120	0.26	+0.7
3,004,524	+		CA265_RS12120	0.26	+0.4
3,004,528	-		CA265_RS12120	0.26	-0.1
3,004,591	+		CA265_RS12120	0.30	-0.3
3,004,738	+		CA265_RS12120	0.40	-0.1
3,004,771	+		CA265_RS12120	0.42	+0.4
3,004,857	+		CA265_RS12120	0.47	-1.4
3,004,857	+		CA265_RS12120	0.47	-2.3
3,004,857	+		CA265_RS12120	0.47	+0.5
3,004,858	-		CA265_RS12120	0.47	-0.6
3,004,881	+		CA265_RS12120	0.49	-0.1
3,004,882	-		CA265_RS12120	0.49	-0.6
3,004,884	-		CA265_RS12120	0.49	-0.2
3,004,923	+		CA265_RS12120	0.51	-0.2
3,004,923	+		CA265_RS12120	0.51	-0.7
3,004,924	-		CA265_RS12120	0.51	-1.6
3,004,924	-		CA265_RS12120	0.51	-1.2
3,004,925	+		CA265_RS12120	0.51	-0.3
3,004,925	+		CA265_RS12120	0.51	+0.5
3,004,926	-		CA265_RS12120	0.51	-0.7
3,004,930	-		CA265_RS12120	0.52	+1.7
3,004,954	+		CA265_RS12120	0.53	+0.2
3,004,954	+		CA265_RS12120	0.53	-1.4
3,004,954	+		CA265_RS12120	0.53	-0.7
3,004,955	-		CA265_RS12120	0.53	+0.4
3,004,955	-		CA265_RS12120	0.53	+0.7
3,004,955	-		CA265_RS12120	0.53	-0.2