Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06300

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
1,546,935	+		CA265_RS06295	0.74	+0.3
1,546,935	+		CA265_RS06295	0.74	+1.3
1,546,936	-		CA265_RS06295	0.74	+0.0
1,546,969	-		CA265_RS06295	0.75	-0.1
1,547,010	-		CA265_RS06295	0.77	+0.2
1,547,244	+		CA265_RS06295	0.87	-0.3
1,547,245	-		CA265_RS06295	0.87	+1.0
1,547,375	+				+0.5
1,547,474	-				-0.1
1,547,482	-				-0.5
1,547,487	+				-0.8
1,547,487	+				+0.5
1,547,669	+				+1.0
1,547,683	-				+0.5
1,547,686	-				+1.0
1,547,724	+				+0.2
1,547,725	-				+1.4
1,547,786	-				+1.0
1,547,786	-				+0.1
1,547,801	+				+3.2
1,547,801	+				+1.4
1,547,832	+				-1.6
1,547,933	-				-0.6
1,547,936	-				+0.8
1,547,951	-				+0.6
1,547,951	-				-0.6
1,547,991	-				-0.6
1,548,020	-				+0.2
1,548,020	-				-0.2
1,548,053	-		CA265_RS06300	0.12	+0.1
1,548,075	+		CA265_RS06300	0.14	+0.7
1,548,122	+		CA265_RS06300	0.18	-1.4
1,548,151	+		CA265_RS06300	0.21	+0.7
1,548,151	+		CA265_RS06300	0.21	+0.1
1,548,152	-		CA265_RS06300	0.21	-1.3
1,548,160	+		CA265_RS06300	0.22	+0.2
1,548,161	-		CA265_RS06300	0.22	-0.3
1,548,164	+		CA265_RS06300	0.22	+1.0
1,548,165	-		CA265_RS06300	0.22	-0.9
1,548,217	+		CA265_RS06300	0.27	+1.4
1,548,217	+		CA265_RS06300	0.27	-0.3
1,548,218	-		CA265_RS06300	0.27	-0.4
1,548,249	+		CA265_RS06300	0.30	-0.5
1,548,249	+		CA265_RS06300	0.30	+0.7
1,548,250	-		CA265_RS06300	0.30	-1.3
1,548,276	+		CA265_RS06300	0.33	-0.3
1,548,276	+		CA265_RS06300	0.33	-0.7
1,548,293	-		CA265_RS06300	0.34	-0.0
1,548,293	-		CA265_RS06300	0.34	-0.1
1,548,432	-		CA265_RS06300	0.47	-0.3
1,548,460	+		CA265_RS06300	0.49	-0.2
1,548,475	+		CA265_RS06300	0.51	+0.1
1,548,476	-		CA265_RS06300	0.51	+1.7
1,548,481	+		CA265_RS06300	0.51	-0.2
1,548,487	+		CA265_RS06300	0.52	-1.2
1,548,497	+		CA265_RS06300	0.53	+0.8
1,548,581	+		CA265_RS06300	0.61	+0.4
1,548,627	-		CA265_RS06300	0.65	-0.4
1,548,652	-		CA265_RS06300	0.67	-0.0
1,548,666	-		CA265_RS06300	0.68	+1.4
1,548,680	+		CA265_RS06300	0.70	+0.3
1,548,716	+		CA265_RS06300	0.73	-0.3
1,548,790	-		CA265_RS06300	0.80	-0.7
1,548,790	-		CA265_RS06300	0.80	-0.2
1,548,909	-				-1.5
1,548,909	-				+1.3
1,548,912	+				+1.1
1,549,008	+				+0.2
1,549,008	+				+0.1
1,549,008	+				+0.8
1,549,146	-				-0.0
1,549,152	-				-1.2
1,549,152	-				-0.4
1,549,314	+				+1.0
1,549,314	+				+0.1
1,549,315	-				+0.1
1,549,315	-				+1.6
1,549,353	-				-0.2
1,549,464	+		CA265_RS06305	0.22	-1.6
1,549,537	+		CA265_RS06305	0.33	+0.9
1,549,538	-		CA265_RS06305	0.33	-1.0
1,549,538	-		CA265_RS06305	0.33	+2.6
1,549,592	+				+2.6
1,549,616	+		CA265_RS06305	0.44	+0.6
1,549,770	+		CA265_RS06305	0.66	-1.6
1,549,771	-		CA265_RS06305	0.66	-0.8
1,549,914	+		CA265_RS06305	0.86	+0.6
1,549,915	-		CA265_RS06305	0.86	+2.1
1,549,920	+		CA265_RS06305	0.87	+0.5
1,549,993	-				-0.3