Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS05275

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
1,259,932	-				-1.4
1,259,952	-				+0.8
1,259,975	+				-3.5
1,259,976	-				-1.0
1,259,984	-				-1.0
1,259,997	-				-0.6
1,260,031	-				-0.4
1,260,051	+				+0.5
1,260,051	+				-2.0
1,260,052	-				+1.1
1,260,063	+				-0.8
1,260,063	+				+1.0
1,260,072	+				-1.0
1,260,072	+				+0.0
1,260,073	-				-0.5
1,260,092	+				+1.2
1,260,202	-		CA265_RS05270	0.16	+0.8
1,260,216	-		CA265_RS05270	0.18	-2.1
1,260,270	-		CA265_RS05270	0.25	+1.1
1,260,283	-		CA265_RS05270	0.26	-0.5
1,260,283	-		CA265_RS05270	0.26	+0.3
1,260,310	-		CA265_RS05270	0.30	-0.2
1,260,315	-		CA265_RS05270	0.30	-0.3
1,260,423	-		CA265_RS05270	0.44	-0.1
1,260,423	-		CA265_RS05270	0.44	+0.2
1,260,424	+		CA265_RS05270	0.44	-0.3
1,260,426	+		CA265_RS05270	0.44	-0.4
1,260,427	-		CA265_RS05270	0.45	+0.2
1,260,427	-		CA265_RS05270	0.45	-2.6
1,260,459	+		CA265_RS05270	0.49	-0.7
1,260,480	-		CA265_RS05270	0.51	+0.5
1,260,587	+		CA265_RS05270	0.65	+0.1
1,260,587	+		CA265_RS05270	0.65	+0.1
1,260,633	+		CA265_RS05270	0.70	+0.3
1,260,752	+		CA265_RS05270	0.85	+0.5
1,260,752	+		CA265_RS05270	0.85	-0.6
1,260,752	+		CA265_RS05270	0.85	-1.4
1,260,753	-		CA265_RS05270	0.86	-0.5
1,260,785	+		CA265_RS05270	0.90	+0.9
1,260,841	-				+0.2
1,260,847	+				-0.2
1,260,911	-				+0.3
1,260,964	-		CA265_RS05275	0.17	+0.4
1,260,990	+		CA265_RS05275	0.26	-0.4
1,260,991	-		CA265_RS05275	0.27	-0.1
1,261,122	+		CA265_RS05275	0.71	-1.1
1,261,125	+		CA265_RS05275	0.72	-0.3
1,261,213	-				+0.5
1,261,222	-				-0.0
1,261,259	-				+0.0
1,261,348	+				+0.2
1,261,391	-				+0.1
1,261,399	+				+0.5
1,261,419	+				-0.7
1,261,452	-				-0.9
1,261,484	+				-1.4
1,261,485	-				+0.3
1,261,491	-				+0.7
1,261,505	+				+0.3
1,261,506	-				-0.9
1,261,621	+				+0.1
1,261,624	+				+0.2
1,261,624	+				+0.7
1,261,643	+				+0.0
1,261,650	+				+1.3
1,261,683	-				-1.2
1,261,700	+				+0.1
1,261,709	+				-0.1
1,261,771	+				+1.1
1,261,772	-				+1.0
1,261,772	-				-0.9
1,261,815	+				+1.1
1,261,886	+				-0.8
1,261,886	+				-0.4
1,261,887	-				-0.2
1,261,973	-		CA265_RS05280	0.12	-0.6
1,262,026	+		CA265_RS05280	0.15	-0.5
1,262,026	+		CA265_RS05280	0.15	-0.4
1,262,027	-		CA265_RS05280	0.15	+0.3
1,262,027	-		CA265_RS05280	0.15	+1.1
1,262,080	-		CA265_RS05280	0.17	-0.5
1,262,086	+		CA265_RS05280	0.17	-0.1
1,262,087	-		CA265_RS05280	0.17	+0.0
1,262,087	-		CA265_RS05280	0.17	+0.1
1,262,109	+		CA265_RS05280	0.18	-0.6
1,262,109	+		CA265_RS05280	0.18	-1.1
1,262,152	+		CA265_RS05280	0.19	-0.2
1,262,167	+		CA265_RS05280	0.20	-1.7
1,262,167	+		CA265_RS05280	0.20	+0.1
1,262,167	+		CA265_RS05280	0.20	-1.6
1,262,168	-		CA265_RS05280	0.20	+0.3
1,262,170	-		CA265_RS05280	0.20	+0.1