Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03055 and CA265_RS03060 overlap by 1 nucleotides CA265_RS03060 and CA265_RS03065 are separated by 238 nucleotides CA265_RS03065 and CA265_RS03070 are separated by 64 nucleotides
CA265_RS03055: CA265_RS03055 - two-component sensor histidine kinase, at 758,275 to 759,627
_RS03055
CA265_RS03060: CA265_RS03060 - DNA-binding response regulator, at 759,627 to 760,304
_RS03060
CA265_RS03065: CA265_RS03065 - hypothetical protein, at 760,543 to 761,079
_RS03065
CA265_RS03070: CA265_RS03070 - sec-independent protein translocase TatC, at 761,144 to 761,539
_RS03070
Position (kb) 759
760
761 Strain fitness (log2 ratio) -2
-1
0
1
2 at 758.646 kb on + strand, within CA265_RS03055 at 758.647 kb on - strand, within CA265_RS03055 at 758.697 kb on + strand, within CA265_RS03055 at 758.725 kb on + strand, within CA265_RS03055 at 758.725 kb on + strand, within CA265_RS03055 at 758.793 kb on + strand, within CA265_RS03055 at 758.794 kb on - strand, within CA265_RS03055 at 758.800 kb on + strand, within CA265_RS03055 at 758.800 kb on + strand, within CA265_RS03055 at 758.896 kb on - strand, within CA265_RS03055 at 758.914 kb on + strand, within CA265_RS03055 at 758.914 kb on + strand, within CA265_RS03055 at 758.915 kb on - strand, within CA265_RS03055 at 758.937 kb on + strand, within CA265_RS03055 at 759.037 kb on + strand, within CA265_RS03055 at 759.038 kb on - strand, within CA265_RS03055 at 759.072 kb on + strand, within CA265_RS03055 at 759.085 kb on + strand, within CA265_RS03055 at 759.103 kb on + strand, within CA265_RS03055 at 759.111 kb on - strand, within CA265_RS03055 at 759.115 kb on - strand, within CA265_RS03055 at 759.143 kb on - strand, within CA265_RS03055 at 759.238 kb on - strand, within CA265_RS03055 at 759.304 kb on + strand, within CA265_RS03055 at 759.382 kb on + strand, within CA265_RS03055 at 759.383 kb on - strand, within CA265_RS03055 at 759.383 kb on - strand, within CA265_RS03055 at 759.390 kb on - strand, within CA265_RS03055 at 759.440 kb on + strand, within CA265_RS03055 at 759.440 kb on + strand, within CA265_RS03055 at 759.441 kb on - strand, within CA265_RS03055 at 759.447 kb on + strand, within CA265_RS03055 at 759.486 kb on + strand, within CA265_RS03055 at 759.490 kb on - strand, within CA265_RS03055 at 759.576 kb on + strand at 759.577 kb on - strand at 759.577 kb on - strand at 759.644 kb on + strand at 759.712 kb on + strand, within CA265_RS03060 at 759.712 kb on + strand, within CA265_RS03060 at 759.820 kb on + strand, within CA265_RS03060 at 759.821 kb on - strand, within CA265_RS03060 at 760.008 kb on + strand, within CA265_RS03060 at 760.059 kb on - strand, within CA265_RS03060 at 760.076 kb on + strand, within CA265_RS03060 at 760.077 kb on - strand, within CA265_RS03060 at 760.079 kb on + strand, within CA265_RS03060 at 760.080 kb on - strand, within CA265_RS03060 at 760.080 kb on - strand, within CA265_RS03060 at 760.080 kb on - strand, within CA265_RS03060 at 760.082 kb on + strand, within CA265_RS03060 at 760.082 kb on + strand, within CA265_RS03060 at 760.083 kb on - strand, within CA265_RS03060 at 760.107 kb on - strand, within CA265_RS03060 at 760.143 kb on + strand, within CA265_RS03060 at 760.203 kb on + strand, within CA265_RS03060 at 760.219 kb on - strand, within CA265_RS03060 at 760.220 kb on + strand, within CA265_RS03060 at 760.266 kb on + strand at 760.267 kb on - strand at 760.287 kb on + strand at 760.296 kb on + strand at 760.296 kb on + strand at 760.317 kb on - strand at 760.419 kb on - strand at 760.453 kb on - strand at 760.473 kb on - strand at 760.473 kb on - strand at 760.477 kb on + strand at 760.478 kb on - strand at 760.525 kb on + strand at 760.641 kb on + strand, within CA265_RS03065 at 760.765 kb on + strand, within CA265_RS03065 at 760.777 kb on - strand, within CA265_RS03065 at 760.783 kb on + strand, within CA265_RS03065 at 760.839 kb on + strand, within CA265_RS03065 at 760.840 kb on - strand, within CA265_RS03065 at 760.878 kb on + strand, within CA265_RS03065 at 760.993 kb on - strand, within CA265_RS03065 at 761.001 kb on + strand, within CA265_RS03065 at 761.020 kb on + strand, within CA265_RS03065 at 761.021 kb on - strand, within CA265_RS03065 at 761.099 kb on + strand at 761.236 kb on + strand, within CA265_RS03070 at 761.236 kb on + strand, within CA265_RS03070
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.0001 mg/ml remove 758,646 + CA265_RS03055 0.27 -1.9 758,647 - CA265_RS03055 0.27 -1.3 758,697 + CA265_RS03055 0.31 -0.8 758,725 + CA265_RS03055 0.33 -0.0 758,725 + CA265_RS03055 0.33 -0.3 758,793 + CA265_RS03055 0.38 +1.6 758,794 - CA265_RS03055 0.38 -0.1 758,800 + CA265_RS03055 0.39 -0.6 758,800 + CA265_RS03055 0.39 +0.4 758,896 - CA265_RS03055 0.46 -1.4 758,914 + CA265_RS03055 0.47 +0.5 758,914 + CA265_RS03055 0.47 -0.0 758,915 - CA265_RS03055 0.47 +0.0 758,937 + CA265_RS03055 0.49 +0.5 759,037 + CA265_RS03055 0.56 -0.4 759,038 - CA265_RS03055 0.56 -0.2 759,072 + CA265_RS03055 0.59 -0.8 759,085 + CA265_RS03055 0.60 +1.0 759,103 + CA265_RS03055 0.61 -0.2 759,111 - CA265_RS03055 0.62 -0.8 759,115 - CA265_RS03055 0.62 -0.1 759,143 - CA265_RS03055 0.64 +0.6 759,238 - CA265_RS03055 0.71 +0.8 759,304 + CA265_RS03055 0.76 -1.7 759,382 + CA265_RS03055 0.82 -0.8 759,383 - CA265_RS03055 0.82 +0.9 759,383 - CA265_RS03055 0.82 -0.9 759,390 - CA265_RS03055 0.82 +0.4 759,440 + CA265_RS03055 0.86 -0.9 759,440 + CA265_RS03055 0.86 +0.5 759,441 - CA265_RS03055 0.86 +0.2 759,447 + CA265_RS03055 0.87 -0.6 759,486 + CA265_RS03055 0.90 +1.3 759,490 - CA265_RS03055 0.90 +0.1 759,576 + +0.0 759,577 - -1.4 759,577 - +1.6 759,644 + -1.1 759,712 + CA265_RS03060 0.13 -0.6 759,712 + CA265_RS03060 0.13 -1.0 759,820 + CA265_RS03060 0.28 -0.7 759,821 - CA265_RS03060 0.29 -1.0 760,008 + CA265_RS03060 0.56 -0.9 760,059 - CA265_RS03060 0.64 +0.2 760,076 + CA265_RS03060 0.66 -1.6 760,077 - CA265_RS03060 0.66 +0.3 760,079 + CA265_RS03060 0.67 -0.0 760,080 - CA265_RS03060 0.67 +1.8 760,080 - CA265_RS03060 0.67 +0.0 760,080 - CA265_RS03060 0.67 +1.9 760,082 + CA265_RS03060 0.67 +0.6 760,082 + CA265_RS03060 0.67 -1.2 760,083 - CA265_RS03060 0.67 -0.9 760,107 - CA265_RS03060 0.71 -0.1 760,143 + CA265_RS03060 0.76 -0.4 760,203 + CA265_RS03060 0.85 +0.4 760,219 - CA265_RS03060 0.87 -0.0 760,220 + CA265_RS03060 0.87 +0.2 760,266 + -0.8 760,267 - +0.1 760,287 + +0.1 760,296 + +0.8 760,296 + -0.6 760,317 - +0.0 760,419 - -0.2 760,453 - +0.1 760,473 - +0.9 760,473 - +0.4 760,477 + -0.8 760,478 - +1.1 760,525 + -0.8 760,641 + CA265_RS03065 0.18 +0.7 760,765 + CA265_RS03065 0.41 +0.6 760,777 - CA265_RS03065 0.44 -0.0 760,783 + CA265_RS03065 0.45 +0.1 760,839 + CA265_RS03065 0.55 -0.1 760,840 - CA265_RS03065 0.55 -0.1 760,878 + CA265_RS03065 0.62 +0.7 760,993 - CA265_RS03065 0.84 +0.6 761,001 + CA265_RS03065 0.85 +0.2 761,020 + CA265_RS03065 0.89 +0.8 761,021 - CA265_RS03065 0.89 -0.6 761,099 + -1.8 761,236 + CA265_RS03070 0.23 -2.0 761,236 + CA265_RS03070 0.23 +1.2
Or see this region's nucleotide sequence