Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02060 and CA265_RS02065 are separated by 37 nucleotides CA265_RS02065 and CA265_RS02070 are separated by 170 nucleotides CA265_RS02070 and CA265_RS02075 are separated by 474 nucleotides
CA265_RS02060: CA265_RS02060 - hypothetical protein, at 521,323 to 522,825
_RS02060
CA265_RS02065: CA265_RS02065 - hypothetical protein, at 522,863 to 523,537
_RS02065
CA265_RS02070: CA265_RS02070 - tyrosine--tRNA ligase, at 523,708 to 524,994
_RS02070
CA265_RS02075: CA265_RS02075 - hypothetical protein, at 525,469 to 526,266
_RS02075
Position (kb) 523
524
525 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 522.713 kb on + strand at 522.714 kb on - strand at 522.754 kb on - strand at 522.775 kb on - strand at 522.811 kb on + strand at 522.850 kb on + strand at 522.853 kb on - strand at 522.902 kb on - strand at 522.902 kb on - strand at 522.903 kb on + strand at 522.947 kb on - strand at 522.971 kb on + strand, within CA265_RS02065 at 523.043 kb on + strand, within CA265_RS02065 at 523.043 kb on + strand, within CA265_RS02065 at 523.044 kb on - strand, within CA265_RS02065 at 523.055 kb on - strand, within CA265_RS02065 at 523.055 kb on - strand, within CA265_RS02065 at 523.165 kb on - strand, within CA265_RS02065 at 523.175 kb on + strand, within CA265_RS02065 at 523.262 kb on - strand, within CA265_RS02065 at 523.271 kb on + strand, within CA265_RS02065 at 523.271 kb on + strand, within CA265_RS02065 at 523.272 kb on - strand, within CA265_RS02065 at 523.274 kb on - strand, within CA265_RS02065 at 523.274 kb on - strand, within CA265_RS02065 at 523.291 kb on + strand, within CA265_RS02065 at 523.350 kb on - strand, within CA265_RS02065 at 523.498 kb on + strand at 523.499 kb on - strand at 523.518 kb on + strand at 523.568 kb on + strand at 523.599 kb on + strand at 523.600 kb on - strand at 523.638 kb on + strand at 523.639 kb on - strand at 523.660 kb on + strand at 525.017 kb on - strand at 525.055 kb on + strand at 525.055 kb on + strand at 525.126 kb on + strand at 525.174 kb on + strand at 525.203 kb on + strand at 525.289 kb on + strand at 525.289 kb on + strand at 525.290 kb on - strand at 525.290 kb on - strand at 525.298 kb on + strand at 525.323 kb on + strand at 525.345 kb on + strand at 525.346 kb on - strand at 525.470 kb on + strand at 525.616 kb on + strand, within CA265_RS02075 at 525.630 kb on + strand, within CA265_RS02075 at 525.630 kb on + strand, within CA265_RS02075 at 525.630 kb on + strand, within CA265_RS02075 at 525.702 kb on + strand, within CA265_RS02075 at 525.763 kb on + strand, within CA265_RS02075 at 525.874 kb on + strand, within CA265_RS02075 at 525.970 kb on - strand, within CA265_RS02075
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.0001 mg/ml remove 522,713 + -0.7 522,714 - +0.8 522,754 - -0.2 522,775 - +0.4 522,811 + -1.5 522,850 + -1.5 522,853 - -0.2 522,902 - -1.6 522,902 - +0.5 522,903 + +1.2 522,947 - -0.1 522,971 + CA265_RS02065 0.16 -0.5 523,043 + CA265_RS02065 0.27 +1.2 523,043 + CA265_RS02065 0.27 +0.5 523,044 - CA265_RS02065 0.27 +0.5 523,055 - CA265_RS02065 0.28 +1.1 523,055 - CA265_RS02065 0.28 -0.4 523,165 - CA265_RS02065 0.45 +2.8 523,175 + CA265_RS02065 0.46 -0.3 523,262 - CA265_RS02065 0.59 +0.2 523,271 + CA265_RS02065 0.60 -0.0 523,271 + CA265_RS02065 0.60 +0.7 523,272 - CA265_RS02065 0.61 +0.8 523,274 - CA265_RS02065 0.61 -0.6 523,274 - CA265_RS02065 0.61 +1.8 523,291 + CA265_RS02065 0.63 +0.5 523,350 - CA265_RS02065 0.72 -0.5 523,498 + +2.8 523,499 - -0.0 523,518 + +0.7 523,568 + -0.4 523,599 + +0.6 523,600 - +0.5 523,638 + +1.0 523,639 - -0.3 523,660 + +0.5 525,017 - -0.0 525,055 + -0.9 525,055 + -0.1 525,126 + -2.0 525,174 + -0.4 525,203 + +0.2 525,289 + +0.6 525,289 + +0.5 525,290 - +0.2 525,290 - +1.2 525,298 + -0.7 525,323 + -0.7 525,345 + -0.2 525,346 - +2.7 525,470 + +0.8 525,616 + CA265_RS02075 0.18 -0.7 525,630 + CA265_RS02075 0.20 -0.4 525,630 + CA265_RS02075 0.20 -0.3 525,630 + CA265_RS02075 0.20 -0.1 525,702 + CA265_RS02075 0.29 -0.6 525,763 + CA265_RS02075 0.37 -0.3 525,874 + CA265_RS02075 0.51 +0.2 525,970 - CA265_RS02075 0.63 -1.1
Or see this region's nucleotide sequence