Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5135

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
6,092,467	-		Psyr_5135	0.58	-0.2
6,092,530	-		Psyr_5135	0.84	-1.8
6,093,238	-				-0.5
6,093,238	-				-0.5
6,093,238	-				-1.3
6,093,238	-				-0.3
6,093,240	-				-1.0
6,093,240	-				+0.0
6,093,293	-				-0.5
6,093,293	-				+1.6
6,093,313	-				-1.1
6,093,313	-				+0.0
6,093,316	+				-1.3
6,093,317	-				-0.5
6,093,317	-				-1.3
6,093,327	+				+0.0
6,093,328	-				+0.9
6,093,328	-				+1.0
6,093,337	-				+1.3
6,093,339	-				+0.9
6,093,345	+				+0.6
6,093,406	+				-0.8
6,093,494	-				-0.3
6,093,517	+				-0.2
6,093,518	-				+0.5
6,093,518	-				+0.2
6,093,553	+				-0.3
6,093,554	-				-1.5