Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4063

Experiment: KB with Trimethoprim 125 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Trimethoprim 125 ug/ml
4,846,183	+				-0.2
4,846,183	+				+1.2
4,846,183	+				-0.2
4,846,183	+				+0.4
4,846,184	-				+0.1
4,846,184	-				+0.3
4,846,184	-				-0.4
4,846,184	-				+0.3
4,846,184	-				+0.4
4,846,184	-				-0.2
4,846,184	-				-0.4
4,846,184	-				-0.1
4,846,190	+				+1.1
4,846,223	-				-0.2
4,846,354	+		Psyr_4062	0.28	+1.8
4,846,355	-		Psyr_4062	0.28	+0.1
4,846,441	-		Psyr_4062	0.42	-0.2
4,846,570	+		Psyr_4062	0.62	+0.2
4,846,570	+		Psyr_4062	0.62	-0.5
4,846,694	-		Psyr_4062	0.82	+0.4
4,846,750	+				-0.8
4,846,750	+				-1.6
4,846,750	+				+0.0
4,846,750	+				-1.3
4,846,750	+				-1.0
4,846,750	+				-0.4
4,846,750	+				+0.2
4,846,751	-				+1.2
4,846,835	+				-0.2
4,846,835	+				+0.1
4,846,835	+				-0.7
4,846,835	+				+0.1
4,846,835	+				-0.5
4,846,835	+				+1.8
4,846,835	+				-0.4
4,846,836	-				+1.6
4,846,836	-				+0.2
4,846,836	-				-0.2
4,846,836	-				+1.2
4,846,836	-				+1.1
4,846,889	-				+0.4
4,846,889	-				-0.1
4,846,889	-				-1.1
4,846,992	+				+0.3
4,846,992	+				+0.5
4,846,993	-				-1.7
4,847,034	+				-1.3
4,847,035	-				+0.7
4,847,035	-				+0.8
4,847,035	-				-0.5
4,847,035	-				+0.1
4,847,035	-				-1.5
4,847,054	+				+0.6
4,847,442	+		Psyr_4063	0.29	-0.3
4,847,443	-		Psyr_4063	0.29	-0.2
4,847,443	-		Psyr_4063	0.29	-0.3
4,847,444	+		Psyr_4063	0.29	-2.4
4,847,445	-		Psyr_4063	0.29	+0.2
4,847,445	-		Psyr_4063	0.29	-0.1
4,847,445	-		Psyr_4063	0.29	+0.1
4,847,445	-		Psyr_4063	0.29	-1.2
4,847,445	-		Psyr_4063	0.29	-0.7
4,847,543	-		Psyr_4063	0.36	-0.3
4,847,543	-		Psyr_4063	0.36	-1.0
4,848,016	+		Psyr_4063	0.69	-1.6
4,848,016	+		Psyr_4063	0.69	-0.5
4,848,016	+		Psyr_4063	0.69	-1.5
4,848,016	+		Psyr_4063	0.69	-1.2
4,848,017	-		Psyr_4063	0.69	-2.3
4,848,017	-		Psyr_4063	0.69	-1.6
4,848,017	-		Psyr_4063	0.69	-2.2
4,848,017	-		Psyr_4063	0.69	-0.4
4,848,511	+				+0.3
4,848,511	+				-0.2
4,848,512	-				-0.5
4,848,644	+		Psyr_4064	0.11	-1.0
4,848,644	+		Psyr_4064	0.11	-1.6
4,848,644	+		Psyr_4064	0.11	-0.2
4,848,644	+		Psyr_4064	0.11	-0.2
4,848,645	-		Psyr_4064	0.11	-0.8
4,848,645	-		Psyr_4064	0.11	-0.6
4,848,819	+		Psyr_4064	0.28	-2.2
4,848,819	+		Psyr_4064	0.28	+0.5
4,848,820	-		Psyr_4064	0.28	-1.0
4,848,820	-		Psyr_4064	0.28	-1.5
4,848,820	-		Psyr_4064	0.28	+0.6
4,848,820	-		Psyr_4064	0.28	+0.3
4,848,944	+		Psyr_4064	0.39	+0.3
4,848,950	+		Psyr_4064	0.40	-0.5
4,848,950	+		Psyr_4064	0.40	-1.1
4,848,950	+		Psyr_4064	0.40	-0.2
4,848,950	+		Psyr_4064	0.40	-1.0
4,848,950	+		Psyr_4064	0.40	-0.6
4,848,950	+		Psyr_4064	0.40	-0.1
4,848,950	+		Psyr_4064	0.40	+0.4
4,848,950	+		Psyr_4064	0.40	-0.7
4,848,950	+		Psyr_4064	0.40	+0.8
4,848,950	+		Psyr_4064	0.40	-1.3
4,848,950	+		Psyr_4064	0.40	+0.6
4,848,950	+		Psyr_4064	0.40	-1.2
4,848,951	-		Psyr_4064	0.40	-0.7
4,848,951	-		Psyr_4064	0.40	+0.2
4,848,951	-		Psyr_4064	0.40	+0.3
4,848,951	-		Psyr_4064	0.40	-1.3
4,848,951	-		Psyr_4064	0.40	-0.7
4,848,951	-		Psyr_4064	0.40	-0.7
4,848,951	-		Psyr_4064	0.40	+0.1
4,848,951	-		Psyr_4064	0.40	+0.4
4,848,951	-		Psyr_4064	0.40	+0.6
4,848,951	-		Psyr_4064	0.40	+0.7
4,848,951	-		Psyr_4064	0.40	-0.8
4,848,951	-		Psyr_4064	0.40	+0.3
4,848,951	-		Psyr_4064	0.40	-0.2